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KJC3_000637-T2, KJC3_000637-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000637-T2
Unique NameKJC3_000637-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1430073..1432448+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000637-T2 ID=KJC3_000637-T2|Name=KJC3_000637-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2376bp|location=Sequence derived from alignment at ch1:1430073..1432448+ (Aspergillus niger KJC3)
AATCACCATCAAAAAAGAAAATCGTTTACAAAACAACACCTTTTGCACCA
GGTATTCTCTTCAAATGAGCTCACTAAAGAGGCCATTCCATGATCAGGCT
CCAGGGCCAAAGCGAAGTGCATGGCAACTACCAGCGTCATGTGATTTCTG
CCGGCTTAAGAAGATCCGGTGTGACAAAAAACGTCCTTGTTCCAGTTGCA
AAGACAGAGATACCGTGTGTGAATATTCCGAAGGTAGATAGGGTGGAAAG
TAGCTGAATATAGGGATGAGGCTGATCAATGTGGTGCCAGCAGGAACCAG
ACACCAGACATTCCCAAGAGCCCACTATGATCGTCTAAGCTGTACATCGC
TGGAGGAGTATATGTCCCCAACAACTACCCTTTCCGATCCTCTAGGTTAA
CCCTCAGCTAGAGATATTCAAGAGATAAAGGATCGTTTGAAGAGGATAGA
GCAACTGTTGCTCGAAAGTTCAGGTCCACCAAAAAACTTAAATCCGAGGG
ACATAGATTCTTTGGCAGTTACCCTCCCGCCACAATTCAACACGACATAC
TTGGAAACCGATCACCAGAAATGGGACGACCTGGAGTCAATAGCAGCGTC
CTCCCAGCCTGAAGAGATGTGGGATTCTCAGTCCGGAAACGAAAGTTTAC
TGAGCACAGCAGGCACCACTATAGCTGGTCCTGCAGAACTTTCGCGGGCG
TCTTGGCTGAGTCCAGGTTTGGGAGCAGATACACAGCTCCCCCAGCTCAG
CACAGCTAAATGCCTACTTGAACACTACATTCAAGAAATAGACTGTCTGA
GTCATGTAGTTCATGCTCCGTCAACACGGGATCTCCTCGAAAAGGTTTAT
TCCCAACGGTCACAATCGATCAGTCTTTTAAATGAAAGTGTTACATTTTT
CCTATCAATATTTGCTTCCGCCTCATTTTACTTGGGGTCCGGGCATAATC
TTTTAGCCCACGGATTAGGCCTGGACACAGAGACATCCATCTGTTGGAAG
GAGACCGCTCTTCAAAGCATCCTGCAAACCGATGAGATTTTCTCGTCTTC
CTTGACATCCCTGCAATCTGTTCTCATTATTATGTCTCTTCTTTGGGATT
CAGAAGGCCAATCAAAAAGATATCATACTTTGAAAGGTCTCGCATATGCG
AAGGCGACCCAGATGGGGATACACAATATTGATGCGGAACGGCCAAACGT
GGAACCAAACCCGCTGGAAAGAGAGATGAAGCGCCGTTTATGGTGGCATC
TTACTTGTGCCGATTGGTCTGTCTACGTTTGTTACCAAAAGACTCATTCT
ATCTAATATTGACAATCATCTCCAGGTTACTTGGAAGTGCTCCAGGTCCA
CAGCACGGCAGCTACATTATCAGTCCTTATCATATGACGGTCAACCACCC
GGCTAATATAGAAGACGAAGGTATGGCACTAGAGGGGAATCCAGCAGCCC
CGAGGCCCGATCACCACTTGACTTCGATGTCATTCTTTCGTTATCGCATC
AAATTCGCCCATCTCTGTCGCGAAGCCATGGACACGATCCAGCAGGCGAA
GACTACGCGCCCTCTACAACCCATATATCCCCTCATACTAGATATCAGCA
ACAGATACATGTCTTTCCTGGATGAGCTCCCGTGGTTTTTCCGACTAGAA
GGGAACGAGGCGAAACTTGCAGAATTAGTCCAGGAGCGGCCGTATGTCAC
GCAGCAGCGCGCTGTACTTCTGTACGGCATTTATTCCCGCCTTGGTCGCC
TACATCGGCCGTTTGTCTCTCAGGGAATCTCCGATCCGATGTTTTCAGCT
TCGTATAAAACCGGTATAGAGTGTGCGGAAAAACTTTTGAGGATACGTCA
GGTGATGCCCCACGGCCGACTTGGTATATTTGGTCGCTCGCAAAGTGTGG
ATCAACACACATTCAACGCCATGCTCGTCCTGACAATAGACGTCGTGGCG
CATCCAGGGCTTCCTGATTCAGAGCGCCGGAGATGCGAGGTCACTGAGAT
TTGTCACCTTCTGAAAGATAAACACACACGGCCGGGTCAGCCTAGCAGTG
GAATCAGTCGAGCGACCCAGCTCCTGTTGAAGATTGTCCAGGCTCCCCAC
AGACAACACGCCAAAGAAGGGATTAAGGACACCGCTCAGATCTTTTCAGA
AACTGCGCAAACTAAAGATGATCAGGTGCCCCTGAATTCATACGCATCGC
TGGCTCCAGATGAATTAACGAGAGAAGACGCGTCCTCTCAGATGGCCTGG
AGCGATGAATGCTTTAGCTATCATGGTCAGAGTATCAATGCCCTTTTTGG
TGAGCTGCGGGAGTCTCTCTCTGGCCAAAGTAATGGATCTTGGCAGGGAT
ACTTTAACTGGGAGGATCTATCTTGA
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Coding sequence (CDS) from alignment at ch1:1430073..1432448+

>KJC3_000637-T2 ID=KJC3_000637-T2|Name=KJC3_000637-T2|organism=Aspergillus niger KJC3|type=CDS|length=3402bp|location=Sequence derived from alignment at ch1:1430073..1432448+ (Aspergillus niger KJC3)
ATGTGGGATTCTCAGTCCGGAAACGAAAGTTTACTGAGCACAGCAGGCAC
CACTATAGCTGGTCCTGCAGAACTTTCGCGGGCGTCTTGGCTGAGTCCAG
GTTTGGGAGCAGATACACAGCTCCCCCAGCTCAGCACAGCTAAATGCCTA
CTTGAACACTACATTCAAGAAATAGACTGTCTGAGTCATGTAGTTCATGC
TCCGTCAACACGGGATCTCCTCGAAAAGGTTTATTCCCAACGGTCACAAT
CGATCAGTCTTTTAAATGAAAGTGTTACATTTTTCCTATCAATATTTGCT
TCCGCCTCATTTTACTTGGGGTCCGGGCATAATCTTTTAGCCCACGGATT
AGGCCTGGACACAGAGACATCCATCTGTTGGAAGGAGACCGCTCTTCAAA
GCATCCTGCAAACCGATGAGATTTTCTCGTCTTCCTTGACATCCCTGCAA
TCTGTTCTCATTATTATGTCTCTTCTTTGGGATTCAGAAGGCCAATCAAA
AAGATATCATACTTTGAAAGGTCTCGCATATGCGAAGGCGACCCAGATGG
GGATACACAATATTGATGCGGAACGGCCAAACGTGGAACCAAACCCGCTG
GAAAGAGAGATGAAGCGCCGTTTATGGTGGCATCTTACTTGTGCCGATTG
GTTACTTGGAAGTGCTCCAGGTCCACAGCACGGCAGCTACATTATCAGTC
CTTATCATATGACGGTCAACCACCCGGCTAATATAGAAGACGAAGGTATG
GCACTAGAGGGGAATCCAGCAGCCCCGAGGCCCGATCACCACTTGACTTC
GATGTCATTCTTTCGTTATCGCATCAAATTCGCCCATCTCTGTCGCGAAG
CCATGGACACGATCCAGCAGGCGAAGACTACGCGCCCTCTACAACCCATA
TATCCCCTCATACTAGATATCAGCAACAGATACATGTCTTTCCTGGATGA
GCTCCCGTGGTTTTTCCGACTAGAAGGGAACGAGGCGAAACTTGCAGAAT
TAGTCCAGGAGCGGCCGTATGTCACGCAGCAGCGCGCTGTACTTCTGTAC
GGCATTTATTCCCGCCTTGGTCGCCTACATCGGCCGTTTGTCTCTCAGGG
AATCTCCGATCCGATGTTTTCAGCTTCGTATAAAACCGGTATAGAGTGTG
CGGAAAAACTTTTGAGGATACGTCAGGTGATGCCCCACGGCCGACTTGGT
ATATTTGGTCGCTCGCAAAGTGTGGATCAACACACATTCAACGCCATGCT
CGTCCTGACAATAGACGTCGTGGCGCATCCAGGGCTTCCTGATTCAGAGC
GCCGGAGATGCGAGGTCACTGAGATTTGTCACCTTCTGAAAGATAAACAC
ACACGGCCGGGTCAGCCTAGCAGTGGAATCAGTCGAGCGACCCAGCTCCT
GTTGAAGATTGTCCAGGCTCCCCACAGACAACACGCCAAAGAAGGGATTA
AGGACACCGCTCAGATCTTTTCAGAAACTGCGCAAACTAAAGATGATCAG
GTGCCCCTGAATTCATACGCATCGCTGGCTCCAGATGAATTAACGAGAGA
AGACGCGTCCTCTCAGATGGCCTGGAGCGATGAATGCTTTAGCTATCATG
GTCAGAGTATCAATGCCCTTTTTGGTGAGCTGCGGGAGTCTCTCTCTGGC
CAAAGTAATGGATCTTGGCAGGGATACTTTAACTGGGAGGATCTATCTTG
AATGTGGGATTCTCAGTCCGGAAACGAAAGTTTACTGAGCACAGCAGGCA
CCACTATAGCTGGTCCTGCAGAACTTTCGCGGGCGTCTTGGCTGAGTCCA
GGTTTGGGAGCAGATACACAGCTCCCCCAGCTCAGCACAGCTAAATGCCT
ACTTGAACACTACATTCAAGAAATAGACTGTCTGAGTCATGTAGTTCATG
CTCCGTCAACACGGGATCTCCTCGAAAAGGTTTATTCCCAACGGTCACAA
TCGATCAGTCTTTTAAATGAAAGTGTTACATTTTTCCTATCAATATTTGC
TTCCGCCTCATTTTACTTGGGGTCCGGGCATAATCTTTTAGCCCACGGAT
TAGGCCTGGACACAGAGACATCCATCTGTTGGAAGGAGACCGCTCTTCAA
AGCATCCTGCAAACCGATGAGATTTTCTCGTCTTCCTTGACATCCCTGCA
ATCTGTTCTCATTATTATGTCTCTTCTTTGGGATTCAGAAGGCCAATCAA
AAAGATATCATACTTTGAAAGGTCTCGCATATGCGAAGGCGACCCAGATG
GGGATACACAATATTGATGCGGAACGGCCAAACGTGGAACCAAACCCGCT
GGAAAGAGAGATGAAGCGCCGTTTATGGTGGCATCTTACTTGTGCCGATT
GGTTACTTGGAAGTGCTCCAGGTCCACAGCACGGCAGCTACATTATCAGT
CCTTATCATATGACGGTCAACCACCCGGCTAATATAGAAGACGAAGGTAT
GGCACTAGAGGGGAATCCAGCAGCCCCGAGGCCCGATCACCACTTGACTT
CGATGTCATTCTTTCGTTATCGCATCAAATTCGCCCATCTCTGTCGCGAA
GCCATGGACACGATCCAGCAGGCGAAGACTACGCGCCCTCTACAACCCAT
ATATCCCCTCATACTAGATATCAGCAACAGATACATGTCTTTCCTGGATG
AGCTCCCGTGGTTTTTCCGACTAGAAGGGAACGAGGCGAAACTTGCAGAA
TTAGTCCAGGAGCGGCCGTATGTCACGCAGCAGCGCGCTGTACTTCTGTA
CGGCATTTATTCCCGCCTTGGTCGCCTACATCGGCCGTTTGTCTCTCAGG
GAATCTCCGATCCGATGTTTTCAGCTTCGTATAAAACCGGTATAGAGTGT
GCGGAAAAACTTTTGAGGATACGTCAGGTGATGCCCCACGGCCGACTTGG
TATATTTGGTCGCTCGCAAAGTGTGGATCAACACACATTCAACGCCATGC
TCGTCCTGACAATAGACGTCGTGGCGCATCCAGGGCTTCCTGATTCAGAG
CGCCGGAGATGCGAGGTCACTGAGATTTGTCACCTTCTGAAAGATAAACA
CACACGGCCGGGTCAGCCTAGCAGTGGAATCAGTCGAGCGACCCAGCTCC
TGTTGAAGATTGTCCAGGCTCCCCACAGACAACACGCCAAAGAAGGGATT
AAGGACACCGCTCAGATCTTTTCAGAAACTGCGCAAACTAAAGATGATCA
GGTGCCCCTGAATTCATACGCATCGCTGGCTCCAGATGAATTAACGAGAG
AAGACGCGTCCTCTCAGATGGCCTGGAGCGATGAATGCTTTAGCTATCAT
GGTCAGAGTATCAATGCCCTTTTTGGTGAGCTGCGGGAGTCTCTCTCTGG
CCAAAGTAATGGATCTTGGCAGGGATACTTTAACTGGGAGGATCTATCTT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000637KJC3_000637Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000637-T2KJC3_000637-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000637-T2.utr5p1KJC3_000637-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000637-T2.utr5p2KJC3_000637-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000637-T2.utr5p3KJC3_000637-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000637-T2.exon1KJC3_000637-T2.exon1Aspergillus niger KJC3exon
KJC3_000637-T2.exon2KJC3_000637-T2.exon2Aspergillus niger KJC3exon
KJC3_000637-T2.exon3KJC3_000637-T2.exon3Aspergillus niger KJC3exon
KJC3_000637-T2.exon4KJC3_000637-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000637-T2.cdsKJC3_000637-T2.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1430073..1432448 +
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