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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1448168..1450339+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000643-T1 ID=KJC3_000643-T1|Name=KJC3_000643-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2172bp|location=Sequence derived from alignment at ch1:1448168..1450339+ (Aspergillus niger KJC3)
AACCGTCCGTCGGTCTCGCGACTCCGACAATTCCGAACCAAGAATCCATA
CTACCTTACTTAACTGAGTAGTACCAAGTGACGATGAATACGAGCTATCC
TACTAACAGTAGTCGTACTAACTGTAACTGGAATTGAATGGCTGGCTGGC
TGGGTTGCTGACTGACCGGACCGCACTGGCCTTGTCAGTTCAGTTATTAA
TAGGGATTTAAGCTTACCTCGTGCTCTATAAGAACCGGGGTTTAGTTGGC
AAGGTTTCATCATCCAGATGACTCTGCGCTATCTTTCTTCATCTTCTTTG
AGTCAGGTGCTCAGACGGACTGCCTCTACTGCTTCTATATTGCGCTTCAA
AGCGTCTTCATACGATCTGCCGAGAATGAACTCGTCAACTGCTACCACTA
CTAATATACCCCGATCTCTTCTGAACGATGCCATTATGGCAACATCTACG
AATATCCACCTCTCGCCTGAAACAAATCCTGGAATCATCTCGCATAATGT
GAGCGAGGAGTCGGCTCGCGTGGCGAGTGAAGTTCTGCAGGAGGATATGC
TATCTCATCATGTGTTTTTTAATCAGAGTGGGTTTCATAGTATGTTCCCC
CCTTTCCCATCTCTTACTTTTCTAAGGGTGCTTGGAGGATATTGGCTAAC
GGTATAGACCACATCCCCCACCATATTCTAAGCCTATATGCCCTCGGTGC
AACACCCCAACAGATCCGCGCCGCATATGAAAAGAACAGCAGTTATCAGC
GGCCCAAGATACCCGTGGATGAGGATGTGGTGAATCAGATGGGAGACGAA
AAGGGGTTCCTGAAGTATCTGGGGCTGGGGAAGCATTATAGTAACTATCT
GGAGTTTTTCCAACGTCAGATGAAGGAGAAGGGGGAGGAGAGGGTATTAG
GGGAGTATCTCCTCTCGGATTCGGGGGCTGAGGTGGCTGAGAACATGCTG
GGGAGGTTGTTTGGAGGTATCTTTCTTTCTTTTTCCCTTCGTCTCTCATT
TTGGATTGACTCAAGGGGGGAGTGATGGCTAATTGTTGTGGATAGGTTTA
ATCCATCCATTTATTCACTTCGGATTCGGTCTCGAGTTCAATCAGCCTGC
TATCGTAGCTGAAGGTCTGGCACAGGCGGCTGTTCACGAGGACTGGTACG
GTCCGTTATTCTTCTGGCCTGTGGAAAAGGCAGCCGGGGGAGTGGCTATA
CGAGGGAAGAAGTCCATGCTGCAGATCCTGGAGGAAATTCGAGCCGATGA
GAAGCTGGCGCGGTCTGCACAGTATGATGATAGCCAGCGGATGAAGAACG
GGGTGCTGAAACGGGCTCCAGATGAGATGATCAAATATGCGGCGGAGTTT
ACGGTATCCGTAGATCAGATTGAGCAGAAGATGGTGGAGATTATCAATAC
TGTTGGTGAGTTATATTCCTTCTTTCCTGATACGTCTCTACGTGTGTGTA
TCTGGCAGTGACTAACTGATGTGGATGTAGCATACTTCACTAGTGCCGCT
CAGCGCCCCGATAAACAGATCAAGTTCGATTTCTTCTACATCCACGGGGT
CAACTCGACTATCTTCCTGTCGAAGATCATCCGATTGCCGTATCTGGATG
ACGTGACTAAAGCCCGGATTCTGGAGTGGACAGGCCGACTGGATCTGTTG
CTCTATGTAGCGTATGGAGCAGCGGATTTGCATCTAGATGAGATTACGAG
GTACCCGGCAGCGAAGAGCTGGGAGGAGATCTATGCTTATTGCAATGCTC
AGTCGAGCGATGATGGACATCTGCCCAAGTTGGTGCGAGCTTTGAAGAAT
GGTGAGAGAGCATGTCGGCCGTACGAAGACCGGGCTGAGGAGTTGGGGTT
GAAGATTAAGGGCGATATGTGGTTGAAGATTGCGAATATGGGTATGTTCA
TCCCGGATGCTTCTTATGGAAGCGGAAGAGTTACTGATTGGAATTATTAG
TGATGGATTCGACTGCTGGCCAGGATCCCCTGTGGGTCCGCGGAGCGGGT
TTTGATGAGGCGTGGAAGAACTTGGAGGACCGACGATCCCGGCTGTAAGA
CACGGATTATTAGTGTATCCAGATTGTGGTACAGAGTGCTGTGTGACTGT
AGTATAGCAGTATGTCGGTGATAATCAATCAATTCTACGTAGCCTCATGA
AGTGCGCATTAGAGGAAGGAAG back to topCoding sequence (CDS) from alignment at ch1:1448168..1450339+ >KJC3_000643-T1 ID=KJC3_000643-T1|Name=KJC3_000643-T1|organism=Aspergillus niger KJC3|type=CDS|length=7500bp|location=Sequence derived from alignment at ch1:1448168..1450339+ (Aspergillus niger KJC3)
ATGACTCTGCGCTATCTTTCTTCATCTTCTTTGAGTCAGGTGCTCAGACG
GACTGCCTCTACTGCTTCTATATTGCGCTTCAAAGCGTCTTCATACGATC
TGCCGAGAATGAACTCGTCAACTGCTACCACTACTAATATACCCCGATCT
CTTCTGAACGATGCCATTATGGCAACATCTACGAATATCCACCTCTCGCC
TGAAACAAATCCTGGAATCATCTCGCATAATGTGAGCGAGGAGTCGGCTC
GCGTGGCGAGTGAAGTTCTGCAGGAGGATATGCTATCTCATCATGTGTTT
TTTAATCAGAGTGGGTTTCATAACCACATCCCCCACCATATTCTAAGCCT
ATATGCCCTCGGTGCAACACCCCAACAGATCCGCGCCGCATATGAAAAGA
ACAGCAGTTATCAGCGGCCCAAGATACCCGTGGATGAGGATGTGGTGAAT
CAGATGGGAGACGAAAAGGGGTTCCTGAAGTATCTGGGGCTGGGGAAGCA
TTATAGTAACTATCTGGAGTTTTTCCAACGTCAGATGAAGGAGAAGGGGG
AGGAGAGGGTATTAGGGGAGTATCTCCTCTCGGATTCGGGGGCTGAGGTG
GCTGAGAACATGCTGGGGAGGTTGTTTGGAGGTTTAATCCATCCATTTAT
TCACTTCGGATTCGGTCTCGAGTTCAATCAGCCTGCTATCGTAGCTGAAG
GTCTGGCACAGGCGGCTGTTCACGAGGACTGGTACGGTCCGTTATTCTTC
TGGCCTGTGGAAAAGGCAGCCGGGGGAGTGGCTATACGAGGGAAGAAGTC
CATGCTGCAGATCCTGGAGGAAATTCGAGCCGATGAGAAGCTGGCGCGGT
CTGCACAGTATGATGATAGCCAGCGGATGAAGAACGGGGTGCTGAAACGG
GCTCCAGATGAGATGATCAAATATGCGGCGGAGTTTACGGTATCCGTAGA
TCAGATTGAGCAGAAGATGGTGGAGATTATCAATACTGTTGCATACTTCA
CTAGTGCCGCTCAGCGCCCCGATAAACAGATCAAGTTCGATTTCTTCTAC
ATCCACGGGGTCAACTCGACTATCTTCCTGTCGAAGATCATCCGATTGCC
GTATCTGGATGACGTGACTAAAGCCCGGATTCTGGAGTGGACAGGCCGAC
TGGATCTGTTGCTCTATGTAGCGTATGGAGCAGCGGATTTGCATCTAGAT
GAGATTACGAGGTACCCGGCAGCGAAGAGCTGGGAGGAGATCTATGCTTA
TTGCAATGCTCAGTCGAGCGATGATGGACATCTGCCCAAGTTGGTGCGAG
CTTTGAAGAATGGTGAGAGAGCATGTCGGCCGTACGAAGACCGGGCTGAG
GAGTTGGGGTTGAAGATTAAGGGCGATATGTGGTTGAAGATTGCGAATAT
GGTGATGGATTCGACTGCTGGCCAGGATCCCCTGTGGGTCCGCGGAGCGG
GTTTTGATGAGGCGTGGAAGAACTTGGAGGACCGACGATCCCGGCTGTAA
ATGACTCTGCGCTATCTTTCTTCATCTTCTTTGAGTCAGGTGCTCAGACG
GACTGCCTCTACTGCTTCTATATTGCGCTTCAAAGCGTCTTCATACGATC
TGCCGAGAATGAACTCGTCAACTGCTACCACTACTAATATACCCCGATCT
CTTCTGAACGATGCCATTATGGCAACATCTACGAATATCCACCTCTCGCC
TGAAACAAATCCTGGAATCATCTCGCATAATGTGAGCGAGGAGTCGGCTC
GCGTGGCGAGTGAAGTTCTGCAGGAGGATATGCTATCTCATCATGTGTTT
TTTAATCAGAGTGGGTTTCATAACCACATCCCCCACCATATTCTAAGCCT
ATATGCCCTCGGTGCAACACCCCAACAGATCCGCGCCGCATATGAAAAGA
ACAGCAGTTATCAGCGGCCCAAGATACCCGTGGATGAGGATGTGGTGAAT
CAGATGGGAGACGAAAAGGGGTTCCTGAAGTATCTGGGGCTGGGGAAGCA
TTATAGTAACTATCTGGAGTTTTTCCAACGTCAGATGAAGGAGAAGGGGG
AGGAGAGGGTATTAGGGGAGTATCTCCTCTCGGATTCGGGGGCTGAGGTG
GCTGAGAACATGCTGGGGAGGTTGTTTGGAGGTTTAATCCATCCATTTAT
TCACTTCGGATTCGGTCTCGAGTTCAATCAGCCTGCTATCGTAGCTGAAG
GTCTGGCACAGGCGGCTGTTCACGAGGACTGGTACGGTCCGTTATTCTTC
TGGCCTGTGGAAAAGGCAGCCGGGGGAGTGGCTATACGAGGGAAGAAGTC
CATGCTGCAGATCCTGGAGGAAATTCGAGCCGATGAGAAGCTGGCGCGGT
CTGCACAGTATGATGATAGCCAGCGGATGAAGAACGGGGTGCTGAAACGG
GCTCCAGATGAGATGATCAAATATGCGGCGGAGTTTACGGTATCCGTAGA
TCAGATTGAGCAGAAGATGGTGGAGATTATCAATACTGTTGCATACTTCA
CTAGTGCCGCTCAGCGCCCCGATAAACAGATCAAGTTCGATTTCTTCTAC
ATCCACGGGGTCAACTCGACTATCTTCCTGTCGAAGATCATCCGATTGCC
GTATCTGGATGACGTGACTAAAGCCCGGATTCTGGAGTGGACAGGCCGAC
TGGATCTGTTGCTCTATGTAGCGTATGGAGCAGCGGATTTGCATCTAGAT
GAGATTACGAGGTACCCGGCAGCGAAGAGCTGGGAGGAGATCTATGCTTA
TTGCAATGCTCAGTCGAGCGATGATGGACATCTGCCCAAGTTGGTGCGAG
CTTTGAAGAATGGTGAGAGAGCATGTCGGCCGTACGAAGACCGGGCTGAG
GAGTTGGGGTTGAAGATTAAGGGCGATATGTGGTTGAAGATTGCGAATAT
GGTGATGGATTCGACTGCTGGCCAGGATCCCCTGTGGGTCCGCGGAGCGG
GTTTTGATGAGGCGTGGAAGAACTTGGAGGACCGACGATCCCGGCTGTAA
ATGACTCTGCGCTATCTTTCTTCATCTTCTTTGAGTCAGGTGCTCAGACG
GACTGCCTCTACTGCTTCTATATTGCGCTTCAAAGCGTCTTCATACGATC
TGCCGAGAATGAACTCGTCAACTGCTACCACTACTAATATACCCCGATCT
CTTCTGAACGATGCCATTATGGCAACATCTACGAATATCCACCTCTCGCC
TGAAACAAATCCTGGAATCATCTCGCATAATGTGAGCGAGGAGTCGGCTC
GCGTGGCGAGTGAAGTTCTGCAGGAGGATATGCTATCTCATCATGTGTTT
TTTAATCAGAGTGGGTTTCATAACCACATCCCCCACCATATTCTAAGCCT
ATATGCCCTCGGTGCAACACCCCAACAGATCCGCGCCGCATATGAAAAGA
ACAGCAGTTATCAGCGGCCCAAGATACCCGTGGATGAGGATGTGGTGAAT
CAGATGGGAGACGAAAAGGGGTTCCTGAAGTATCTGGGGCTGGGGAAGCA
TTATAGTAACTATCTGGAGTTTTTCCAACGTCAGATGAAGGAGAAGGGGG
AGGAGAGGGTATTAGGGGAGTATCTCCTCTCGGATTCGGGGGCTGAGGTG
GCTGAGAACATGCTGGGGAGGTTGTTTGGAGGTTTAATCCATCCATTTAT
TCACTTCGGATTCGGTCTCGAGTTCAATCAGCCTGCTATCGTAGCTGAAG
GTCTGGCACAGGCGGCTGTTCACGAGGACTGGTACGGTCCGTTATTCTTC
TGGCCTGTGGAAAAGGCAGCCGGGGGAGTGGCTATACGAGGGAAGAAGTC
CATGCTGCAGATCCTGGAGGAAATTCGAGCCGATGAGAAGCTGGCGCGGT
CTGCACAGTATGATGATAGCCAGCGGATGAAGAACGGGGTGCTGAAACGG
GCTCCAGATGAGATGATCAAATATGCGGCGGAGTTTACGGTATCCGTAGA
TCAGATTGAGCAGAAGATGGTGGAGATTATCAATACTGTTGCATACTTCA
CTAGTGCCGCTCAGCGCCCCGATAAACAGATCAAGTTCGATTTCTTCTAC
ATCCACGGGGTCAACTCGACTATCTTCCTGTCGAAGATCATCCGATTGCC
GTATCTGGATGACGTGACTAAAGCCCGGATTCTGGAGTGGACAGGCCGAC
TGGATCTGTTGCTCTATGTAGCGTATGGAGCAGCGGATTTGCATCTAGAT
GAGATTACGAGGTACCCGGCAGCGAAGAGCTGGGAGGAGATCTATGCTTA
TTGCAATGCTCAGTCGAGCGATGATGGACATCTGCCCAAGTTGGTGCGAG
CTTTGAAGAATGGTGAGAGAGCATGTCGGCCGTACGAAGACCGGGCTGAG
GAGTTGGGGTTGAAGATTAAGGGCGATATGTGGTTGAAGATTGCGAATAT
GGTGATGGATTCGACTGCTGGCCAGGATCCCCTGTGGGTCCGCGGAGCGG
GTTTTGATGAGGCGTGGAAGAACTTGGAGGACCGACGATCCCGGCTGTAA
ATGACTCTGCGCTATCTTTCTTCATCTTCTTTGAGTCAGGTGCTCAGACG
GACTGCCTCTACTGCTTCTATATTGCGCTTCAAAGCGTCTTCATACGATC
TGCCGAGAATGAACTCGTCAACTGCTACCACTACTAATATACCCCGATCT
CTTCTGAACGATGCCATTATGGCAACATCTACGAATATCCACCTCTCGCC
TGAAACAAATCCTGGAATCATCTCGCATAATGTGAGCGAGGAGTCGGCTC
GCGTGGCGAGTGAAGTTCTGCAGGAGGATATGCTATCTCATCATGTGTTT
TTTAATCAGAGTGGGTTTCATAACCACATCCCCCACCATATTCTAAGCCT
ATATGCCCTCGGTGCAACACCCCAACAGATCCGCGCCGCATATGAAAAGA
ACAGCAGTTATCAGCGGCCCAAGATACCCGTGGATGAGGATGTGGTGAAT
CAGATGGGAGACGAAAAGGGGTTCCTGAAGTATCTGGGGCTGGGGAAGCA
TTATAGTAACTATCTGGAGTTTTTCCAACGTCAGATGAAGGAGAAGGGGG
AGGAGAGGGTATTAGGGGAGTATCTCCTCTCGGATTCGGGGGCTGAGGTG
GCTGAGAACATGCTGGGGAGGTTGTTTGGAGGTTTAATCCATCCATTTAT
TCACTTCGGATTCGGTCTCGAGTTCAATCAGCCTGCTATCGTAGCTGAAG
GTCTGGCACAGGCGGCTGTTCACGAGGACTGGTACGGTCCGTTATTCTTC
TGGCCTGTGGAAAAGGCAGCCGGGGGAGTGGCTATACGAGGGAAGAAGTC
CATGCTGCAGATCCTGGAGGAAATTCGAGCCGATGAGAAGCTGGCGCGGT
CTGCACAGTATGATGATAGCCAGCGGATGAAGAACGGGGTGCTGAAACGG
GCTCCAGATGAGATGATCAAATATGCGGCGGAGTTTACGGTATCCGTAGA
TCAGATTGAGCAGAAGATGGTGGAGATTATCAATACTGTTGCATACTTCA
CTAGTGCCGCTCAGCGCCCCGATAAACAGATCAAGTTCGATTTCTTCTAC
ATCCACGGGGTCAACTCGACTATCTTCCTGTCGAAGATCATCCGATTGCC
GTATCTGGATGACGTGACTAAAGCCCGGATTCTGGAGTGGACAGGCCGAC
TGGATCTGTTGCTCTATGTAGCGTATGGAGCAGCGGATTTGCATCTAGAT
GAGATTACGAGGTACCCGGCAGCGAAGAGCTGGGAGGAGATCTATGCTTA
TTGCAATGCTCAGTCGAGCGATGATGGACATCTGCCCAAGTTGGTGCGAG
CTTTGAAGAATGGTGAGAGAGCATGTCGGCCGTACGAAGACCGGGCTGAG
GAGTTGGGGTTGAAGATTAAGGGCGATATGTGGTTGAAGATTGCGAATAT
GGTGATGGATTCGACTGCTGGCCAGGATCCCCTGTGGGTCCGCGGAGCGG
GTTTTGATGAGGCGTGGAAGAACTTGGAGGACCGACGATCCCGGCTGTAA
ATGACTCTGCGCTATCTTTCTTCATCTTCTTTGAGTCAGGTGCTCAGACG
GACTGCCTCTACTGCTTCTATATTGCGCTTCAAAGCGTCTTCATACGATC
TGCCGAGAATGAACTCGTCAACTGCTACCACTACTAATATACCCCGATCT
CTTCTGAACGATGCCATTATGGCAACATCTACGAATATCCACCTCTCGCC
TGAAACAAATCCTGGAATCATCTCGCATAATGTGAGCGAGGAGTCGGCTC
GCGTGGCGAGTGAAGTTCTGCAGGAGGATATGCTATCTCATCATGTGTTT
TTTAATCAGAGTGGGTTTCATAACCACATCCCCCACCATATTCTAAGCCT
ATATGCCCTCGGTGCAACACCCCAACAGATCCGCGCCGCATATGAAAAGA
ACAGCAGTTATCAGCGGCCCAAGATACCCGTGGATGAGGATGTGGTGAAT
CAGATGGGAGACGAAAAGGGGTTCCTGAAGTATCTGGGGCTGGGGAAGCA
TTATAGTAACTATCTGGAGTTTTTCCAACGTCAGATGAAGGAGAAGGGGG
AGGAGAGGGTATTAGGGGAGTATCTCCTCTCGGATTCGGGGGCTGAGGTG
GCTGAGAACATGCTGGGGAGGTTGTTTGGAGGTTTAATCCATCCATTTAT
TCACTTCGGATTCGGTCTCGAGTTCAATCAGCCTGCTATCGTAGCTGAAG
GTCTGGCACAGGCGGCTGTTCACGAGGACTGGTACGGTCCGTTATTCTTC
TGGCCTGTGGAAAAGGCAGCCGGGGGAGTGGCTATACGAGGGAAGAAGTC
CATGCTGCAGATCCTGGAGGAAATTCGAGCCGATGAGAAGCTGGCGCGGT
CTGCACAGTATGATGATAGCCAGCGGATGAAGAACGGGGTGCTGAAACGG
GCTCCAGATGAGATGATCAAATATGCGGCGGAGTTTACGGTATCCGTAGA
TCAGATTGAGCAGAAGATGGTGGAGATTATCAATACTGTTGCATACTTCA
CTAGTGCCGCTCAGCGCCCCGATAAACAGATCAAGTTCGATTTCTTCTAC
ATCCACGGGGTCAACTCGACTATCTTCCTGTCGAAGATCATCCGATTGCC
GTATCTGGATGACGTGACTAAAGCCCGGATTCTGGAGTGGACAGGCCGAC
TGGATCTGTTGCTCTATGTAGCGTATGGAGCAGCGGATTTGCATCTAGAT
GAGATTACGAGGTACCCGGCAGCGAAGAGCTGGGAGGAGATCTATGCTTA
TTGCAATGCTCAGTCGAGCGATGATGGACATCTGCCCAAGTTGGTGCGAG
CTTTGAAGAATGGTGAGAGAGCATGTCGGCCGTACGAAGACCGGGCTGAG
GAGTTGGGGTTGAAGATTAAGGGCGATATGTGGTTGAAGATTGCGAATAT
GGTGATGGATTCGACTGCTGGCCAGGATCCCCTGTGGGTCCGCGGAGCGG
GTTTTGATGAGGCGTGGAAGAACTTGGAGGACCGACGATCCCGGCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000643-T1.utr5p1 | KJC3_000643-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000643-T1.utr3p1 | KJC3_000643-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025337 |
| DBxref | PFAM:PF14027 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1448168..1450339 + |
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