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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1481590..1486591+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000653-T1 ID=KJC3_000653-T1|Name=KJC3_000653-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5002bp|location=Sequence derived from alignment at ch1:1481590..1486591+ (Aspergillus niger KJC3)
CCCTCCCTCCCCCAAATCCCCCTCCCTTTAACCTAAAGCGTGTCGCATCC
CACGCTGAACCTTTCCCCCCCCTCCCTTCGTCGCGTTCCGGCGTGCTACT
CTTCCCTTGTTTTTGTTTTTCCTTTCTTGCCATGTGTTGGTCTACAGCTC
CGTTACCCGGTCCTTAATGCTTCCGTTATTGTCTCTCGTTCAGCGACGGT
GCGCTTGTAGCTATATTCGCCCTTTGACTTTTCTACCCCGTTGATACTTC
GATCGGAGCTCGATACTTGCATCATATCAATCTTCTGACACGTCAATTGC
ATCTCCGATCGTTTCCCCCCCAGCAATCTGACGTCCGCTCTGGCTAGCAT
TCAACGGTGGTAGTAGTCGATCCCGGTCCGCTCGTGCTCGGTCACTTCAG
CCGCAATGGCCCCCGCCGCACCGCAGCTCCCGACCAGATTCCCTTGCTGG
TGTCGGGCAATATACTCATGGGGCGGAGAAACAAAACGCGATCTGGGATT
CGTGGAGGGTGACCTTATCGAGTGTCTGAATGCTGGTGATGGCCAATGGT
GGATGGGCCGATTGCGGCGTGACAGGCGCATGATGGGGTTGTTTCCCTCC
AATTTCGTCGAAGTACTCAGGGAAGATTTCGTACCAGTTCAACGATCAAC
GAGCCCTATGCTACCACCTGCCTCCTCGCCGATCACGAATCCAACCTCGG
CTCCTAAGAAACAAAAGACAGTCTTCCGAAAGCCATTCCAAGCCCACAAA
GAAGCTCTTGCGCCTTCGGGTGAGCTATCCCGGAGCTCGACCTCTTCATC
GCCAGTGACCAGCACGATTCCGCAAACTCCACCCCGAGATGGCAGTCTTT
CCTCGCGGAAGGTGAAGCCGCTACGCACCCCAACAACCGCTGTAAAGCAT
CAGAGCTCTTTGTCGAGGCCCGTATCCCGGTCTAGGCCTTTATCCCGTGC
GATGTCCCCGCATCCTCCAGCCGAACCAGATCCCCAATTTTCGTCCACCC
TTCCTGGGACATACATGGCCCGGTCAAGACCTCCCTCTCGCGGAGTGTCG
CCCATTCCGCCAGACCCAGAACTCCACCTTCCTTCCATGCCATCTGTGCA
AAGTGCACCACGCCCCGGACCTGCTCCTCGTGCAGTATCACCAGCTCCTC
CGCCAACCATCGATTACCAGCTTCCATCTCTTCCCCCTATGGAAGTTGCA
ATCCAGAGGCCTGCGTCTCGTGCAGTGTCCCCATACCCGCCTGATGACCA
AGACCTTATGCCTCCTCAGGTTCCGAGGCACAGTATATCTCTGCACCGGC
CTTCCTCACGCGAGATATCTCCACTTCAGCTGCACGAGAGAGAAGACTCG
CCGCCCCCGCCACCCCCACCACCACACAGAGTTGCTGTCAATCGTCAGCC
GTCCATCGAGCCACACGTGCCCACACGTCTGGACATGAATGATCGTTTTG
TTACAATATCACGGACGCCATCGCCGGCTGCCCACTCCGAAGGCCGTGGA
CACACCCCGTCGCCCCTTCGTGATGCGATGGAAGACGTGATGACTTCATT
GGAGGATATGGGACTTCCCCGAGGCGGACAGTCGCCGTCGCCGCAGCCGA
TGTTCAACAACCCGTGGTCACCGGACGCGTATGATAGCTTCCGTGAGACT
CGGCCCGCGCAGACCTCCCGTCGGCCACTAACCTCTCTGGGATTCGATGG
AGACAAGGAGTACCAATATCATGGCAGTCAGACTCACAGAAACAGCGTCT
ATGCACATGATCCCTACATGGACGGTCCGCCACAACTGAACAACTACGTA
CAGAGGATGGAGAGTCGACTTCGGCAGATGCAGGAGCAGAGCCAAAGGGA
GGCCGAGGAGGATGCGCAACCCTCTGATGAGGAGGAAGCCCCACCGCCTC
CCCCAAGAAACGTACCCTACCATGCCCGGCATAACTCGATCCCCGCTCAG
TACCCGTTGGTGAGAGGACGAAGATCCGGCCAAGACCTCCGTGGGGACTT
GCTCAATCGGACGTATACAAATAAGTCCAGCACGACAAACTCTTCGAGTG
GGGTGCACAGTACGAGTACGACACAGACGGGCAGCACTGAGAGGACCAGT
CAAAGCATCATGAGTGGTCCCTCGGCCGGTGGATTCAGTGCAACGAGTGC
GGGTAGTTATGCCAGGAGAGGTACCACTCCAGCCGAGAGACCAAACACGG
CAGTCGACACGTTTCGCTCGAGAGGCTTCAGCGATGTCTCCCGGGTGGCA
AGGCCAGAAACCCCGTTAACCGGTATATCGTACCATTCCAGCCATAATAC
TTCTCGGCAAGGTGCGTCGTCTGCCATACCGTGGTCGTCCGGCGAAGGCG
GCGCAGAAGAGCCGACCGCCGTGTTTGGGGGCCTTTCCACACCGAAGGCC
AAGAAGCCCGGGTTCTTCAAAAAGATTTTCGAGTCAGCGAAGACGGGTGC
TGCCAACGCGAGGAGCAGCATCGCAGTCGGGCACAACGGTGGATCTTCGT
CCCCCACCAAAGGCAGAGGAATCTCGCCAATCCGTGCTCTGCAATCCAGC
CGGGACTCTGCCCGCGACATGGGGCCTGGCACCAGCGCCATTGATTGGGT
GCAAGTCCGCCGCGATGTGAACCGCGCGAGCTCGCCCAGTCGAAACGAGA
GGATCGAGAGGGCCGAAAGATGCCAAATGATGGACCATCCTGTGATCTAT
TCGGTGGAGGAACTTTACGAGACGGCGGAAGGTGATGAAAGCATTGACGG
CTTGCCGATCAGTGAGCCAACCAACTTTGCCAATGCCAACTTGAATCTTG
TGGACAAGAGCGCGCGTTTTGTCAACAGTCTTCCCCCAATGACGAATCCG
GCGAGCTTAGCACATGGGTATGTCTGCCGACCTTACAAGAGTGATGTCCA
GAGGCTGCGCGCCATCTTTACTTGGGTGAGCGAGAAGATCGCCTGGGATG
ACCCGGTTGAGGAGATCGGCATTGATTTGCGGCGGGTGCTGCAGACGAAA
AGAGGCAGCCCCCAGGAAGTAGCTTTCCTGGTCAAGGAGATGTGTGCGGC
GGTCGGTCTCCACGCTGAAGCGATCAATGGGTTCCTCAAAAGCCCTGGGG
AGATGTTTGACCTGGACGGCCTCTCGCGACCCAACCATTGGTGGAACTCG
GTGCTTGTGGATGGCGAATGGCGCATCATGGACTGTTCGCTTGCCAGCCC
TACGAATCCCCGACGGAATCAATTTGTCACCAATAACACTTCCGTGGCCG
AAAGCTGGTATTTCCTGGCACGACCCTTGGAGATTTGCTATACGCATGTT
CCTCTTGCTCCTGAGGAGCAGCACATCTGCCCGCCTATTTCGCCGGACGT
TCTACTGACGCTGCCGGCGGCCTGTCCGCCCTATTTCAAGCTGAATATGC
AGTTCCCCGATTTTGATACCAGTATCATCCGGATTGATGGCTTGGAAGTC
ATGCAGATCCGTCTTTCGGTGCCCCCGGACGTGGAATGTGCGGCCGAGGT
GGAAGCCCCAGCGTTTGCCCGTGACGCCGATGGTGATTTCTTCGAAAGCG
GCGAAGTTGTGCGCAAGCGCGCGCTGGTGCAGCCCGACTGGGTCAGCGGA
CAGAAGCGAATTACGGTCAAAGCCATCCTGCCCGGGGACGAAGGACAGGG
CACAGTCAAGGTGTACGCCGGCAAGAAGGGATTGATGCACTCCAGTCGCG
ATATTCCCCATCCGTTGGCTCTCGCCCTTCCCATGCTCCACAGCAGTGAG
AACCCGCCGTACGACTTTGTGCTGCGCCATCCGACCCCTCACGCTCAGCG
ACATGATCTCTACATCATGCAGCCGCAGTGCGCGAAATTGGCGGTCAACA
ACACCTTTGTTTTTGCTGTCCGCCAACATCCAGCCTCCCCGGCTTTGTCG
TCCGGCAGTAATGAGGCTGGCGTCAGTGGGCGCGTCTCACCGTCGGTCTT
TACCCGGCCTGCCAGCGCATTAAGTATGGTTTCCAGTTCCGCGGGCGGTT
CCACGGTGTCCGGGGTGTCCAACGAGTTTTCTGCCTCGACGTCGGCCATT
TCATCCGGCCGGTCGATGTCCGGACGTGAAAAGCCGGCCAAGCTGGCAAT
TCAGTCTCCATCAGGCAAGATTCTGCGTCTGACGCGGAAGCCCGAGCATA
TGCTCAGCCCCCACACAGGCACGCACGCCTTCACCGATGCGCCGGCGGAC
GGCAGCGTATGGGAGACGGTGATCAAGATTGGCGAGCGCGGCGTCTGGCG
AGGACTGGTACTGGCCGACCGGGTTGCACGCTGGTGTGTCTTTTGCGAAT
GGGAGTGTTACTGACCGAATTCCCGAACTGCCGGGCTTGCATTTGGGAAC
TTTTGCCAAACAAACGCGACTGTAATCTAATCTTTTATTTATGTTTTCAT
CTACGGAGGTTCCTTCATCGACATTTGTCTAATTGACAGCATTGCATCCG
GTCCGGGACTGGCATCTGTACCAGGACATCATCATCATCAAGGGGCAGCA
GGACGTGATCTACCCCTACATGTTACTACCATCATATTGAGGCGTTTCCG
GAAAGACCATGATGGCGCCGGTGTTATTCTTCTTATCCTTTTCTCTTTCT
GCTTGATTGTTTGAACAAATTTATCTCATGTTTTTATGCATTATGGTTTT
CTGAGTTATGGGGCATCATGTCTGATGATATGGCTGTTTGGGGATTTATT
CAATTGCAATGAACTAACTACTGCTACGATCTAGAAGCATGACTAGACTC
GGTTGGTGCTGTGAATGAGGTTGGGATGCATTGAAGTTGGAATCTTTATT
TGGCTTCAATTGAGTTTGAGTTGTATTGTACTTATTATGAGTTGTCTTGT
GCCGGATTGTTGCAGTCTCGCATTCGCCCATTGGCCATTGTCCATCATCA
ATCAAACAATCAGTCAATGTTGATAAGGATGGATATGGAACCAGATCTGA
GTTCACTGACATAGCTGAAGTAAAGCAAGCATGTATAATTATACAATTGG
CC back to topCoding sequence (CDS) from alignment at ch1:1481590..1486591+ >KJC3_000653-T1 ID=KJC3_000653-T1|Name=KJC3_000653-T1|organism=Aspergillus niger KJC3|type=CDS|length=3909bp|location=Sequence derived from alignment at ch1:1481590..1486591+ (Aspergillus niger KJC3)
ATGGCCCCCGCCGCACCGCAGCTCCCGACCAGATTCCCTTGCTGGTGTCG
GGCAATATACTCATGGGGCGGAGAAACAAAACGCGATCTGGGATTCGTGG
AGGGTGACCTTATCGAGTGTCTGAATGCTGGTGATGGCCAATGGTGGATG
GGCCGATTGCGGCGTGACAGGCGCATGATGGGGTTGTTTCCCTCCAATTT
CGTCGAAGTACTCAGGGAAGATTTCGTACCAGTTCAACGATCAACGAGCC
CTATGCTACCACCTGCCTCCTCGCCGATCACGAATCCAACCTCGGCTCCT
AAGAAACAAAAGACAGTCTTCCGAAAGCCATTCCAAGCCCACAAAGAAGC
TCTTGCGCCTTCGGGTGAGCTATCCCGGAGCTCGACCTCTTCATCGCCAG
TGACCAGCACGATTCCGCAAACTCCACCCCGAGATGGCAGTCTTTCCTCG
CGGAAGGTGAAGCCGCTACGCACCCCAACAACCGCTGTAAAGCATCAGAG
CTCTTTGTCGAGGCCCGTATCCCGGTCTAGGCCTTTATCCCGTGCGATGT
CCCCGCATCCTCCAGCCGAACCAGATCCCCAATTTTCGTCCACCCTTCCT
GGGACATACATGGCCCGGTCAAGACCTCCCTCTCGCGGAGTGTCGCCCAT
TCCGCCAGACCCAGAACTCCACCTTCCTTCCATGCCATCTGTGCAAAGTG
CACCACGCCCCGGACCTGCTCCTCGTGCAGTATCACCAGCTCCTCCGCCA
ACCATCGATTACCAGCTTCCATCTCTTCCCCCTATGGAAGTTGCAATCCA
GAGGCCTGCGTCTCGTGCAGTGTCCCCATACCCGCCTGATGACCAAGACC
TTATGCCTCCTCAGGTTCCGAGGCACAGTATATCTCTGCACCGGCCTTCC
TCACGCGAGATATCTCCACTTCAGCTGCACGAGAGAGAAGACTCGCCGCC
CCCGCCACCCCCACCACCACACAGAGTTGCTGTCAATCGTCAGCCGTCCA
TCGAGCCACACGTGCCCACACGTCTGGACATGAATGATCGTTTTGTTACA
ATATCACGGACGCCATCGCCGGCTGCCCACTCCGAAGGCCGTGGACACAC
CCCGTCGCCCCTTCGTGATGCGATGGAAGACGTGATGACTTCATTGGAGG
ATATGGGACTTCCCCGAGGCGGACAGTCGCCGTCGCCGCAGCCGATGTTC
AACAACCCGTGGTCACCGGACGCGTATGATAGCTTCCGTGAGACTCGGCC
CGCGCAGACCTCCCGTCGGCCACTAACCTCTCTGGGATTCGATGGAGACA
AGGAGTACCAATATCATGGCAGTCAGACTCACAGAAACAGCGTCTATGCA
CATGATCCCTACATGGACGGTCCGCCACAACTGAACAACTACGTACAGAG
GATGGAGAGTCGACTTCGGCAGATGCAGGAGCAGAGCCAAAGGGAGGCCG
AGGAGGATGCGCAACCCTCTGATGAGGAGGAAGCCCCACCGCCTCCCCCA
AGAAACGTACCCTACCATGCCCGGCATAACTCGATCCCCGCTCAGTACCC
GTTGGTGAGAGGACGAAGATCCGGCCAAGACCTCCGTGGGGACTTGCTCA
ATCGGACGTATACAAATAAGTCCAGCACGACAAACTCTTCGAGTGGGGTG
CACAGTACGAGTACGACACAGACGGGCAGCACTGAGAGGACCAGTCAAAG
CATCATGAGTGGTCCCTCGGCCGGTGGATTCAGTGCAACGAGTGCGGGTA
GTTATGCCAGGAGAGGTACCACTCCAGCCGAGAGACCAAACACGGCAGTC
GACACGTTTCGCTCGAGAGGCTTCAGCGATGTCTCCCGGGTGGCAAGGCC
AGAAACCCCGTTAACCGGTATATCGTACCATTCCAGCCATAATACTTCTC
GGCAAGGTGCGTCGTCTGCCATACCGTGGTCGTCCGGCGAAGGCGGCGCA
GAAGAGCCGACCGCCGTGTTTGGGGGCCTTTCCACACCGAAGGCCAAGAA
GCCCGGGTTCTTCAAAAAGATTTTCGAGTCAGCGAAGACGGGTGCTGCCA
ACGCGAGGAGCAGCATCGCAGTCGGGCACAACGGTGGATCTTCGTCCCCC
ACCAAAGGCAGAGGAATCTCGCCAATCCGTGCTCTGCAATCCAGCCGGGA
CTCTGCCCGCGACATGGGGCCTGGCACCAGCGCCATTGATTGGGTGCAAG
TCCGCCGCGATGTGAACCGCGCGAGCTCGCCCAGTCGAAACGAGAGGATC
GAGAGGGCCGAAAGATGCCAAATGATGGACCATCCTGTGATCTATTCGGT
GGAGGAACTTTACGAGACGGCGGAAGGTGATGAAAGCATTGACGGCTTGC
CGATCAGTGAGCCAACCAACTTTGCCAATGCCAACTTGAATCTTGTGGAC
AAGAGCGCGCGTTTTGTCAACAGTCTTCCCCCAATGACGAATCCGGCGAG
CTTAGCACATGGGTATGTCTGCCGACCTTACAAGAGTGATGTCCAGAGGC
TGCGCGCCATCTTTACTTGGGTGAGCGAGAAGATCGCCTGGGATGACCCG
GTTGAGGAGATCGGCATTGATTTGCGGCGGGTGCTGCAGACGAAAAGAGG
CAGCCCCCAGGAAGTAGCTTTCCTGGTCAAGGAGATGTGTGCGGCGGTCG
GTCTCCACGCTGAAGCGATCAATGGGTTCCTCAAAAGCCCTGGGGAGATG
TTTGACCTGGACGGCCTCTCGCGACCCAACCATTGGTGGAACTCGGTGCT
TGTGGATGGCGAATGGCGCATCATGGACTGTTCGCTTGCCAGCCCTACGA
ATCCCCGACGGAATCAATTTGTCACCAATAACACTTCCGTGGCCGAAAGC
TGGTATTTCCTGGCACGACCCTTGGAGATTTGCTATACGCATGTTCCTCT
TGCTCCTGAGGAGCAGCACATCTGCCCGCCTATTTCGCCGGACGTTCTAC
TGACGCTGCCGGCGGCCTGTCCGCCCTATTTCAAGCTGAATATGCAGTTC
CCCGATTTTGATACCAGTATCATCCGGATTGATGGCTTGGAAGTCATGCA
GATCCGTCTTTCGGTGCCCCCGGACGTGGAATGTGCGGCCGAGGTGGAAG
CCCCAGCGTTTGCCCGTGACGCCGATGGTGATTTCTTCGAAAGCGGCGAA
GTTGTGCGCAAGCGCGCGCTGGTGCAGCCCGACTGGGTCAGCGGACAGAA
GCGAATTACGGTCAAAGCCATCCTGCCCGGGGACGAAGGACAGGGCACAG
TCAAGGTGTACGCCGGCAAGAAGGGATTGATGCACTCCAGTCGCGATATT
CCCCATCCGTTGGCTCTCGCCCTTCCCATGCTCCACAGCAGTGAGAACCC
GCCGTACGACTTTGTGCTGCGCCATCCGACCCCTCACGCTCAGCGACATG
ATCTCTACATCATGCAGCCGCAGTGCGCGAAATTGGCGGTCAACAACACC
TTTGTTTTTGCTGTCCGCCAACATCCAGCCTCCCCGGCTTTGTCGTCCGG
CAGTAATGAGGCTGGCGTCAGTGGGCGCGTCTCACCGTCGGTCTTTACCC
GGCCTGCCAGCGCATTAAGTATGGTTTCCAGTTCCGCGGGCGGTTCCACG
GTGTCCGGGGTGTCCAACGAGTTTTCTGCCTCGACGTCGGCCATTTCATC
CGGCCGGTCGATGTCCGGACGTGAAAAGCCGGCCAAGCTGGCAATTCAGT
CTCCATCAGGCAAGATTCTGCGTCTGACGCGGAAGCCCGAGCATATGCTC
AGCCCCCACACAGGCACGCACGCCTTCACCGATGCGCCGGCGGACGGCAG
CGTATGGGAGACGGTGATCAAGATTGGCGAGCGCGGCGTCTGGCGAGGAC
TGGTACTGGCCGACCGGGTTGCACGCTGGTGTGTCTTTTGCGAATGGGAG
TGTTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000653-T1.utr5p1 | KJC3_000653-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000653-T1.utr3p1 | KJC3_000653-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.7 |
| DBxref | InterPro:IPR036028 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR035553 |
| DBxref | InterPro:IPR002931 |
| DBxref | InterPro:IPR001452 |
| DBxref | PFAM:PF01841 |
| DBxref | PFAM:PF07653 |
| DBxref | PFAM:PF00018 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1481590..1486591 + |
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