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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1503406..1507031- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000660-T1 ID=KJC3_000660-T1|Name=KJC3_000660-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3626bp|location=Sequence derived from alignment at ch1:1503406..1507031- (Aspergillus niger KJC3)
ACGCAGTAACAAGGGGCAGTTGACCGAATGTACGATCGGGATTGGCATGC
AAATGTTCGTTCAGAACATGCAATTACCCGGTCCCTGATGTCCAATCTTT
CTCACCAGCCCAGGGAGTCGTCGATCAAGCCGATGGGACAATGTCAGGGA
AGAAGATTCTCTTCTGCAAGTCGTGGACAAGTACTACCCGAGCATTTTAG
ACGCGAACGATAGAGGGCAGTTGGAGAGAAGGGACCGGGTGATACTAAGC
ACCAGATATCTCCTCTCCGATCGGCGACATGATTGTTGAGGACTCTATAG
CAGCAGGTCGTTCCACCGATCGGCCGGGATCATAATAATTGGGGGCAATT
TCATGAGGAGAATCTTGCAGGCAGCGATGGGGTCGGCAGTTCGTCATGGT
GCCTTTTCCGGAGGCTCCATCGGTGGGAGGAAGTCTTGTTCTTCCCCACC
TCCGTCCTTCACGCCTTCTTTCCTCGCCTTCCACTCTCTCTCCTCCGTCC
GTCATCGTGTCGCTGTTTCTGCTGCTGCTGAGACCGGGCTCATCATGGAG
AAGATCACGGACAAGATCGCGGCTTTGCCGCCAGACGCCAATTACTTTTC
TCTGGAGTTTTTCCCTCCCAAGACAAAGATGGTGGGGCAAGCCTCTACAA
CTCCCCGCACTGGAGTGACTCAATCTGGGATTATCTATCGGTCGCTAACA
AGATGCTCGCGGTCTATCTAGGGTTTTGCCAATTTACAAGCGCGGTTGGA
GCGTATGGCTCAGGCTTTGCGCCCGTTGTTCGTGACAGTCACTTGGGGCG
CTGGAGGAAGCACCGCCGCGAGATCTCTGGAGCTGGCGGAGATCTGTCAG
CGCCAACTACAGCTGACGACATGTCTACACCTTACTTGCACGAACATGAG
TCGCGCCTTGGTGGACGAAGCCCTGGAGGAAGCAAAGGTGCTTGGAATCA
GAAACATCTTGGCCTTGCGCGGTGACCCGCCCCGGAGCGAAGAATACAAC
ATGCACGGCGAGGATGACAGCAACAAGGACTTTACATTTGCCGTCGACTT
GGTGCGCTACATCCGCAAGCAGTATGGCGACTACTTCTGCATCGGTGTTG
CTGCGTATCCCGAGGGTCACCCCGCCGATAATTTCCAGGATGGTCAGGAT
CCGGCCAGGGACCTGCCCTACTTGATCGAGAAGACGCAGGCCGGCGCGGA
TTTCATCATGACTCAGTTGACCTACGACCTGGAAGCATACACCAAATTTG
AGACTATGCTAAGGAACCATGAATCTGGCGTTTTCAAGACCATTCCCATC
GTCCCTGGTCTGATGCCCATCCACAGTTACAAGATCCTGACGAGAGTCAC
GAAGCTCAGTCATGTCAAGATCCCCCCGCACGTCCTATCGAAGCTGGAGG
AAGTGAAGCATGATGACGATGCCGTGAAGCGCATCGGTGTGGACATCATC
AGTGATCTTGTGCATGGCATCCGCGATCTTGTCTCTCCTGGTCTCCGCGG
ATTCCACTTCTACACTCTGAACCTGGAGAAGACGGTGTCCTTCATCCTCG
AGCGCTGCGAACTCATTCCCCCCTACACAGAAATAGATGACTCCGATGCC
TTGGCCGATGGAGGTAACTTGTCTGCTCTGGATTCTTCGTCGTACATTGC
CCCGAATGGCGCTCCCATCCGCACCCTGGCCAGCCGCCGCTCATCGGTCA
GCTCCATCCCTCACAACCGTGTCATCGTCGACAAGGTACAGATCTCCGAA
CCCTCTTCGAAAGATTCCATAACACATGAGGCCTCCGCCTTGAGCGCCGG
CCTTCCCGCCATGCCGCCGGACCGCAGCACAACTCTCCAGATCTCCGAAG
GTCTCGGTGCCCTCGGCAGAGAAGCCACATGGGATGACTTCCCCAACGGA
CGTTGGGGTGATGCGCGCTCACCCGCTTTCGGTGAGATCGACGGCTACGG
TCCCTCGCTGCACGTTTCCGCTGCCACTGCCCGGCGCATCTGGGGCTACC
CGGTCACCCGCGAAGACATCAGCACCCTATTCCGCCGCCACGTCTCCGGC
GAGCTCCACATGGTGCCCTGGTCCGAAGGAGGCGCCGAAGAGGACAGCAA
CGGCCTTAACGCCGAAACAGCCATCATCCAACCCGAGCTCCTAACCCTAA
TCGACAAGAAAGGCTGGTGGACTCTGGCCTCGCAACCCGCCATCAACGGC
GTGCGCAGCGACGACCCCGTCTTCGGCTGGGGCCCACCGGGAGAAGGCTT
CGTCTTCCAAAAGCCCTTCGTGGAATTCTTCTGCCCCACCAAAGACTACC
TCACCGTCCTCAAGCCCCTTCTCCAGAAACACGGCCACGAAAAGCTTGCC
TGGTTCGCCACCAACGTCAAGGGCGATTTCGAGTCCTCCCTCCCCGGCCC
CAACACCGACGACCCGGACCCGATTGACATTAATCCGGCCAACGTCAATG
CCGTCACCTGGGGTGTCTTCCGCGGCAAGGAAATCGTCACCCCCACCATT
ATCGAGGAAGTCAGTTTCCGCGCCTGGGGCGACGAAGCCTATCGCATCTG
GGATGAATGGCGCCGCATCTACCCCAAGAACTCGGCGACAGAGCGCTTCC
TGGACGACACTAAGAACGATGTCTGGCTTGTCTGTGTCGTGGGTCAGGAA
TTCGGCGCCGGCACGGAACCTGGCTCGGAGGAAGAGGAGGATGAGAAGAA
GTGGATGTGGCGCGAGTTGGCGAACTCTCAGTGATTTTGTTTTGGATGGA
ACAGGTCAATGGATGGACGTATTAACCCGACTAGTATGACTACTCCTGGC
CACTGGCTTGGTCTGGGTGGTGCGCGGGGTGATGGGTTTGGTTTATCTGG
ATTTACAGTAAGTTAAGCACAGTACTATACAAATGGGGAGGGGTCTGTTT
CTTTGATAATTGAATACTTCTTTCAAATAAACTCTAACTCTACCTATGGG
GAAAGGACATGAAGTACTATGACTATGTTCGGTGGTGTGGAGGGGAACTA
TGTATGTATGTATGTATTTGCATCATGGGTTGAAATGAAAATAGAGAGAG
TCTGCAATTTAATAAGTCTGAACTATTACATTCAAGGGCCTTGTGGGGGA
AACGGTAATATAACTCTTCGTTCAATTAATCATTCATCATCCACAAACCC
ACGCTATGCTATGCCATAACTATCTCTAGTCTGCATTCATGTATCCATGC
ATCCATGCATCTAGCTATCTATAAACCGACCAAGCTACTATGACACCTCC
TTCATCCCAAATCCATGCTCCTCAAGCCCCTCGGCGCCTGTATCCGGCGT
CGCCAGAGAAGACTGCGACTCGGCGAACTTCTCCATTGCGTCGTCGAGTT
TACCGTATGCGCGGGCATTACGGCGGGGTTGGTTGGGCCCAGACGCGGGG
AGTTGGTAGCCGCGGAGTCTATATAGCGATCAGTTGTCAGTTATGGGATG
CGGGTGTGGTTATGAAATTCGGGGAATAGGATGTATATATATGTACATAC
CGAGGACCCTGGCCGGTAGGCTTGGGTAGTTCGGAGACGTAAGTGCGTTG
GAAGGTTTGAGTGTCGGCTTCGAAGGTACCCCGGGAAATGCTTTCGCGGA
TGGCAGCGAAGAAAGTATCCATTACA back to topCoding sequence (CDS) from alignment at ch1:1503406..1507031- >KJC3_000660-T1 ID=KJC3_000660-T1|Name=KJC3_000660-T1|organism=Aspergillus niger KJC3|type=CDS|length=4584bp|location=Sequence derived from alignment at ch1:1503406..1507031- (Aspergillus niger KJC3)
GGTTTTGCCAATTTACAAGCGCGGTTGGAGCGTATGGCTCAGGCTTTGCG
CCCGTTGTTCGTGACAGTCACTTGGGGCGCTGGAGGAAGCACCGCCGCGA
GATCTCTGGAGCTGGCGGAGATCTGTCAGCGCCAACTACAGCTGACGACA
TGTCTACACCTTACTTGCACGAACATGAGTCGCGCCTTGGTGGACGAAGC
CCTGGAGGAAGCAAAGGTGCTTGGAATCAGAAACATCTTGGCCTTGCGCG
GTGACCCGCCCCGGAGCGAAGAATACAACATGCACGGCGAGGATGACAGC
AACAAGGACTTTACATTTGCCGTCGACTTGGTGCGCTACATCCGCAAGCA
GTATGGCGACTACTTCTGCATCGGTGTTGCTGCGTATCCCGAGGGTCACC
CCGCCGATAATTTCCAGGATGGTCAGGATCCGGCCAGGGACCTGCCCTAC
TTGATCGAGAAGACGCAGGCCGGCGCGGATTTCATCATGACTCAGTTGAC
CTACGACCTGGAAGCATACACCAAATTTGAGACTATGCTAAGGAACCATG
AATCTGGCGTTTTCAAGACCATTCCCATCGTCCCTGGTCTGATGCCCATC
CACAGTTACAAGATCCTGACGAGAGTCACGAAGCTCAGTCATGTCAAGAT
CCCCCCGCACGTCCTATCGAAGCTGGAGGAAGTGAAGCATGATGACGATG
CCGTGAAGCGCATCGGTGTGGACATCATCAGTGATCTTGTGCATGGCATC
CGCGATCTTGTCTCTCCTGGTCTCCGCGGATTCCACTTCTACACTCTGAA
CCTGGAGAAGACGGTGTCCTTCATCCTCGAGCGCTGCGAACTCATTCCCC
CCTACACAGAAATAGATGACTCCGATGCCTTGGCCGATGGAGGTAACTTG
TCTGCTCTGGATTCTTCGTCGTACATTGCCCCGAATGGCGCTCCCATCCG
CACCCTGGCCAGCCGCCGCTCATCGGTCAGCTCCATCCCTCACAACCGTG
TCATCGTCGACAAGGTACAGATCTCCGAACCCTCTTCGAAAGATTCCATA
ACACATGAGGCCTCCGCCTTGAGCGCCGGCCTTCCCGCCATGCCGCCGGA
CCGCAGCACAACTCTCCAGATCTCCGAAGGTCTCGGTGCCCTCGGCAGAG
AAGCCACATGGGATGACTTCCCCAACGGACGTTGGGGTGATGCGCGCTCA
CCCGCTTTCGGTGAGATCGACGGCTACGGTCCCTCGCTGCACGTTTCCGC
TGCCACTGCCCGGCGCATCTGGGGCTACCCGGTCACCCGCGAAGACATCA
GCACCCTATTCCGCCGCCACGTCTCCGGCGAGCTCCACATGGTGCCCTGG
TCCGAAGGAGGCGCCGAAGAGGACAGCAACGGCCTTAACGCCGAAACAGC
CATCATCCAACCCGAGCTCCTAACCCTAATCGACAAGAAAGGCTGGTGGA
CTCTGGCCTCGCAACCCGCCATCAACGGCGTGCGCAGCGACGACCCCGTC
TTCGGCTGGGGCCCACCGGGAGAAGGCTTCGTCTTCCAAAAGCCCTTCGT
GGAATTCTTCTGCCCCACCAAAGACTACCTCACCGTCCTCAAGCCCCTTC
TCCAGAAACACGGCCACGAAAAGCTTGCCTGGTTCGCCACCAACGTCAAG
GGCGATTTCGAGTCCTCCCTCCCCGGCCCCAACACCGACGACCCGGACCC
GATTGACATTAATCCGGCCAACGTCAATGCCGTCACCTGGGGTGTCTTCC
GCGGCAAGGAAATCGTCACCCCCACCATTATCGAGGAAGTCAGTTTCCGC
GCCTGGGGCGACGAAGCCTATCGCATCTGGGATGAATGGCGCCGCATCTA
CCCCAAGAACTCGGCGACAGAGCGCTTCCTGGACGACACTAAGAACGATG
TCTGGCTTGTCTGTGTCGTGGGTCAGGAATTCGGCGCCGGCACGGAACCT
GGCTCGGAGGAAGAGGAGGATGAGAAGAAGTGGATGTGGCGCGAGTTGGC
GAACTCTCAGTGAATGAGGAGAATCTTGCAGGCAGCGATGGGGTCGGCAG
TTCGTCATGGTGCCTTTTCCGGAGGCTCCATCGGTGGGAGGAAGTCTTGT
TCTTCCCCACCTCCGTCCTTCACGCCTTCTTTCCTCGCCTTCCACTCTCT
CTCCTCCGTCCGTCATCGTGTCGCTGTTTCTGCTGCTGCTGAGACCGGGC
TCATCATGGAGAAGATCACGGACAAGATCGCGGCTTTGCCGCCAGACGCC
AATTACTTTTCTCTGGAGTTTTTCCCTCCCAAGACAAAGATGGGTTTTGC
CAATTTACAAGCGCGGTTGGAGCGTATGGCTCAGGCTTTGCGCCCGTTGT
TCGTGACAGTCACTTGGGGCGCTGGAGGAAGCACCGCCGCGAGATCTCTG
GAGCTGGCGGAGATCTGTCAGCGCCAACTACAGCTGACGACATGTCTACA
CCTTACTTGCACGAACATGAGTCGCGCCTTGGTGGACGAAGCCCTGGAGG
AAGCAAAGGTGCTTGGAATCAGAAACATCTTGGCCTTGCGCGGTGACCCG
CCCCGGAGCGAAGAATACAACATGCACGGCGAGGATGACAGCAACAAGGA
CTTTACATTTGCCGTCGACTTGGTGCGCTACATCCGCAAGCAGTATGGCG
ACTACTTCTGCATCGGTGTTGCTGCGTATCCCGAGGGTCACCCCGCCGAT
AATTTCCAGGATGGTCAGGATCCGGCCAGGGACCTGCCCTACTTGATCGA
GAAGACGCAGGCCGGCGCGGATTTCATCATGACTCAGTTGACCTACGACC
TGGAAGCATACACCAAATTTGAGACTATGCTAAGGAACCATGAATCTGGC
GTTTTCAAGACCATTCCCATCGTCCCTGGTCTGATGCCCATCCACAGTTA
CAAGATCCTGACGAGAGTCACGAAGCTCAGTCATGTCAAGATCCCCCCGC
ACGTCCTATCGAAGCTGGAGGAAGTGAAGCATGATGACGATGCCGTGAAG
CGCATCGGTGTGGACATCATCAGTGATCTTGTGCATGGCATCCGCGATCT
TGTCTCTCCTGGTCTCCGCGGATTCCACTTCTACACTCTGAACCTGGAGA
AGACGGTGTCCTTCATCCTCGAGCGCTGCGAACTCATTCCCCCCTACACA
GAAATAGATGACTCCGATGCCTTGGCCGATGGAGGTAACTTGTCTGCTCT
GGATTCTTCGTCGTACATTGCCCCGAATGGCGCTCCCATCCGCACCCTGG
CCAGCCGCCGCTCATCGGTCAGCTCCATCCCTCACAACCGTGTCATCGTC
GACAAGGTACAGATCTCCGAACCCTCTTCGAAAGATTCCATAACACATGA
GGCCTCCGCCTTGAGCGCCGGCCTTCCCGCCATGCCGCCGGACCGCAGCA
CAACTCTCCAGATCTCCGAAGGTCTCGGTGCCCTCGGCAGAGAAGCCACA
TGGGATGACTTCCCCAACGGACGTTGGGGTGATGCGCGCTCACCCGCTTT
CGGTGAGATCGACGGCTACGGTCCCTCGCTGCACGTTTCCGCTGCCACTG
CCCGGCGCATCTGGGGCTACCCGGTCACCCGCGAAGACATCAGCACCCTA
TTCCGCCGCCACGTCTCCGGCGAGCTCCACATGGTGCCCTGGTCCGAAGG
AGGCGCCGAAGAGGACAGCAACGGCCTTAACGCCGAAACAGCCATCATCC
AACCCGAGCTCCTAACCCTAATCGACAAGAAAGGCTGGTGGACTCTGGCC
TCGCAACCCGCCATCAACGGCGTGCGCAGCGACGACCCCGTCTTCGGCTG
GGGCCCACCGGGAGAAGGCTTCGTCTTCCAAAAGCCCTTCGTGGAATTCT
TCTGCCCCACCAAAGACTACCTCACCGTCCTCAAGCCCCTTCTCCAGAAA
CACGGCCACGAAAAGCTTGCCTGGTTCGCCACCAACGTCAAGGGCGATTT
CGAGTCCTCCCTCCCCGGCCCCAACACCGACGACCCGGACCCGATTGACA
TTAATCCGGCCAACGTCAATGCCGTCACCTGGGGTGTCTTCCGCGGCAAG
GAAATCGTCACCCCCACCATTATCGAGGAAGTCAGTTTCCGCGCCTGGGG
CGACGAAGCCTATCGCATCTGGGATGAATGGCGCCGCATCTACCCCAAGA
ACTCGGCGACAGAGCGCTTCCTGGACGACACTAAGAACGATGTCTGGCTT
GTCTGTGTCGTGGGTCAGGAATTCGGCGCCGGCACGGAACCTGGCTCGGA
GGAAGAGGAGGATGAGAAGAAGTGGATGTGGCGCGAGTTGGCGAACTCTC
AGTGAATGAGGAGAATCTTGCAGGCAGCGATGGGGTCGGCAGTTCGTCAT
GGTGCCTTTTCCGGAGGCTCCATCGGTGGGAGGAAGTCTTGTTCTTCCCC
ACCTCCGTCCTTCACGCCTTCTTTCCTCGCCTTCCACTCTCTCTCCTCCG
TCCGTCATCGTGTCGCTGTTTCTGCTGCTGCTGAGACCGGGCTCATCATG
GAGAAGATCACGGACAAGATCGCGGCTTTGCCGCCAGACGCCAATTACTT
TTCTCTGGAGTTTTTCCCTCCCAAGACAAAGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006555 | methionine metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000660-T1.utr3p1 | KJC3_000660-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000660-T1.utr5p1 | KJC3_000660-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029041 |
| DBxref | InterPro:IPR003171 |
| DBxref | InterPro:IPR004621 |
| DBxref | PFAM:PF02219 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1503406..1507031 - |
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