You are here

Home

KJC3_000664-T1, KJC3_000664-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000664-T1
Unique NameKJC3_000664-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1512865..1514443+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000664-T1 ID=KJC3_000664-T1|Name=KJC3_000664-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1579bp|location=Sequence derived from alignment at ch1:1512865..1514443+ (Aspergillus niger KJC3)
GAGGGAGGCCGCATTCGGGTCGATTTTGGCATTGAACTCTCTTCAGGACT
GGTCGGCACGGAGTTCCTGGGCTTTCGGCATCCCCCTACTCTTGCCAATT
CACTTTTGTGGAGGTTTCTCGTCTTTGCTCGCGGCCTGCGTTCTCATCCC
GAATTCAGCATCTCCACGAGCTTCGCCCCTGACACCGCTGGTGCTCCGTC
GCAGTCTCACTCCGGAAACCGCAAGCTCCGCCCGTTCACTGCCCCATCGT
CGACGCAAAACCGAGCAGTCGCTCCTCAACCATCGTAACATCTTCCTATA
TTCGCTACACTCTTGTTACAAGGATAGCGACGGGTAATTTTAAGTTCACT
ATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTGTACGT
CTTCCGCTCCCATGGACGCATCGTAATGGAACGCTAACTGGCCGCTTGAA
ACCAACAGCCTCATCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCT
CAGTATTCACCGGTCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTT
TGATTATGCTCGTCGCGTCCGTCTTGAAGTAAGGCCACCAGTCTAGGAAT
TGCGGCCCTTGGGGGTTTCGGCGTTAACAAATTTCGCTAGGATCTTCTAC
TGGTTCGGCGCTTACTACTCTCTTTCGCTCCTGATTCAGGCCGTTATCAC
TGTCGGGGTGCAGGTAGTCTTGTTGAAGGTTGCATTGGACAATCGGCCAT
CGCCCGGGTTGAAGAACAGCGTTGAGCATGTTCCTTTCAGCAGTGTGGAC
AATGGCGGTGGATTTGCGAGACCCTACGATTTCTGGCAATGGAAGAGCGC
GAAACCGTACGTCCTAATCTTTTCTCTCCTTTCAGAGAGACCATTCTATT
GCAGCGAATACTAACCCACAGTCGTCGATAGTTACTGGATGTTTTTGGCG
TATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTGC
CTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTGG
AAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTCG
TGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATCT
CATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCTT
TCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGTG
CAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTCG
AGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACTT
GAACGAGATTAGATACGGCCGTGAGATTTCCGTTGCTTTCCGTTGGCGTT
GTACATATGGCATAGCTAGACACGTCGGACCTTCAGCTTGGTTCGGCCTC
CGGGGTCATCCGACCTGTTATCAATTGAATTAGAAATAATGTGATGTGAT
TAGACGCTCAATGAAGCTTATGCTGCCAATCGTTGTCCGTAACACCCTAT
CTAATGCAGTCTTCGCATGGTCATCAGTC
back to top

Coding sequence (CDS) from alignment at ch1:1512865..1514443+

>KJC3_000664-T1 ID=KJC3_000664-T1|Name=KJC3_000664-T1|organism=Aspergillus niger KJC3|type=CDS|length=3204bp|location=Sequence derived from alignment at ch1:1512865..1514443+ (Aspergillus niger KJC3)
ATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCTCAT
CACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACCGGT
CGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTCGTC
GCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCTTTC
GCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGTTGA
AGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTTGAG
CATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACCCTA
CGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGGCGT
ATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTGCC
TACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTGGA
AGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTCGT
GCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATCTC
ATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCTTT
CCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGTGC
AGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTCGA
GGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACTTG
AATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCTCA
TCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACCGG
TCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTCGT
CGCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCTTT
CGCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGTTG
AAGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTTGA
GCATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACCCT
ACGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGGCG
TATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTGC
CTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTGG
AAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTCG
TGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATCT
CATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCTT
TCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGTG
CAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTCG
AGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACTT
GAATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCTC
ATCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACCG
GTCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTCG
TCGCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCTT
TCGCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGTT
GAAGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTTG
AGCATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACCC
TACGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGGC
GTATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTG
CCTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTG
GAAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTC
GTGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATC
TCATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCT
TTCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGT
GCAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTC
GAGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACT
TGAATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCT
CATCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACC
GGTCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTC
GTCGCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCT
TTCGCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGT
TGAAGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTT
GAGCATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACC
CTACGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGG
CGTATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATT
GCCTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGT
GGAAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTT
CGTGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGAT
CTCATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGC
TTTCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCG
TGCAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCT
CGAGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGAC
TTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000664KJC3_000664Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000664-T1KJC3_000664-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000664-T1.utr5p1KJC3_000664-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000664-T1.exon1KJC3_000664-T1.exon1Aspergillus niger KJC3exon
KJC3_000664-T1.exon2KJC3_000664-T1.exon2Aspergillus niger KJC3exon
KJC3_000664-T1.exon3KJC3_000664-T1.exon3Aspergillus niger KJC3exon
KJC3_000664-T1.exon4KJC3_000664-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000664-T1.cdsKJC3_000664-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000664-T1.utr3p1KJC3_000664-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006603
DBxrefPFAM:PF04193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1512865..1514443 +
Powered by Drupal