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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1529836..1530930+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000670-T1 ID=KJC3_000670-T1|Name=KJC3_000670-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1095bp|location=Sequence derived from alignment at ch1:1529836..1530930+ (Aspergillus niger KJC3)
AGTTCATCGCCATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCA
CGGGGAATCTTGTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGT
GCCTATTTTGCCCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCA
AGATGAAGGGAGACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTC
AAGCAGAAGGATCTCAAGGACATGCAACAGTTTGCACTGTGTGATGCCAT
GAGGTTTGTGTGGTCATCGCTGTGTCTCAGTCGACTTTCCCACTGATTGC
TTTGGTCTTCACCGCAGGTATCTCCGTGCATTCGAAGTTGGCCGCGAGCC
AACCTCTTCCAAATACGAGGTCCACGTTCGCCTGAAGACGAGGAGAGACG
GTCCCGTCATTCGCAACATGCTTCGATTCCCCCATTCAGTCCAAACCGAG
TCCCGAATTTGCGTCGTGTGCCCTCCCGGAACCCGCCATGAGAAGGAAGC
TCGTGCGGCTGGAGCAGTCTTGGTGGGTGAGCAGGAGGTCTTTGATGCCG
TGAAGGCCGGCAAGATCGAGTTCGACCGCTGTCTCTGCCACCCGGATAGT
TTGGATGCTTTGAACAAGGCTGGCCTGGGTCGGATCCTCGGTCCCAGAGG
CCTGATGCCCAGCGTCAAGACGGGTACTGTGGTCGAAGATATCGCCGTGC
GTGTGGAGATGCTGCGTGGTGGTACTGTTTACCGTGAGCGTGACGCCGTC
ATTCGTGTCCCCGTTGGACAGCTTGGTTTCACCCCCGAGCAATTGCGTGA
CAACCTGCGCGCAACGATCGACCAGATCAAGAAGGATGCGGCCGGTCTTA
ATGACCGCATAACCAAGGAGGTGTACGAAGTGGTAAGTCGCCGACTTGCG
TTGCGCCTGCAATCGGCATCTTTTACTAACGTTCCTTAGGTCCTGAGCTC
GACCAACGGTCCCGGCTTCAGTCTGAATGGAGAGTTCAGGTCGGAGACCT
CTCCCGAATCTTCCGCTTTGCAGGGCGTGTAAAATAGTCTCTAGCGTCTT
CAAGTTTATGGGTGTACAGAATATGTTTCATTAGGAAGGTTACGG back to topCoding sequence (CDS) from alignment at ch1:1529836..1530930+ >KJC3_000670-T1 ID=KJC3_000670-T1|Name=KJC3_000670-T1|organism=Aspergillus niger KJC3|type=CDS|length=2718bp|location=Sequence derived from alignment at ch1:1529836..1530930+ (Aspergillus niger KJC3)
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTTGCACTGTGTGATGCCATGAGGTTTGTGT
ATCTCCGTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAATACGAG
GTCCACGTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCGCAACAT
GCTTCGATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCGTCGTGT
GCCCTCCCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGAGCAGTC
TTGGTGGGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAAGATCGA
GTTCGACCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGAACAAGG
CTGGCCTGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGCGTCAAG
ACGGGTACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCTGCGTGG
TGGTACTGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCGTTGGAC
AGCTTGGTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCAACGATC
GACCAGATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAACCAAGGA
GGTGTACGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCAGTCTGA
ATGGAGAGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTGCAGGGC
GTGTAAATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGG
AATCTTGTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTA
TTTTGCCCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATG
AAGGGAGACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCA
GAAGGATCTCAAGGACATGCAACAGTTTGCACTGTGTGATGCCATGAGGT
TTGTGTATCTCCGTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAA
TACGAGGTCCACGTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCG
CAACATGCTTCGATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCG
TCGTGTGCCCTCCCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGA
GCAGTCTTGGTGGGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAA
GATCGAGTTCGACCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGA
ACAAGGCTGGCCTGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGC
GTCAAGACGGGTACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCT
GCGTGGTGGTACTGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCG
TTGGACAGCTTGGTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCA
ACGATCGACCAGATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAAC
CAAGGAGGTGTACGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCA
GTCTGAATGGAGAGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTG
CAGGGCGTGTAAATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGC
ACGGGGAATCTTGTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTG
TGCCTATTTTGCCCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGC
AAGATGAAGGGAGACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTT
CAAGCAGAAGGATCTCAAGGACATGCAACAGTTTGCACTGTGTGATGCCA
TGAGGTTTGTGTATCTCCGTGCATTCGAAGTTGGCCGCGAGCCAACCTCT
TCCAAATACGAGGTCCACGTTCGCCTGAAGACGAGGAGAGACGGTCCCGT
CATTCGCAACATGCTTCGATTCCCCCATTCAGTCCAAACCGAGTCCCGAA
TTTGCGTCGTGTGCCCTCCCGGAACCCGCCATGAGAAGGAAGCTCGTGCG
GCTGGAGCAGTCTTGGTGGGTGAGCAGGAGGTCTTTGATGCCGTGAAGGC
CGGCAAGATCGAGTTCGACCGCTGTCTCTGCCACCCGGATAGTTTGGATG
CTTTGAACAAGGCTGGCCTGGGTCGGATCCTCGGTCCCAGAGGCCTGATG
CCCAGCGTCAAGACGGGTACTGTGGTCGAAGATATCGCCGTGCGTGTGGA
GATGCTGCGTGGTGGTACTGTTTACCGTGAGCGTGACGCCGTCATTCGTG
TCCCCGTTGGACAGCTTGGTTTCACCCCCGAGCAATTGCGTGACAACCTG
CGCGCAACGATCGACCAGATCAAGAAGGATGCGGCCGGTCTTAATGACCG
CATAACCAAGGAGGTGTACGAAGTGGTCCTGAGCTCGACCAACGGTCCCG
GCTTCAGTCTGAATGGAGAGTTCAGGTCGGAGACCTCTCCCGAATCTTCC
GCTTTGCAGGGCGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000670-T1.utr5p1 | KJC3_000670-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000670-T1.utr3p1 | KJC3_000670-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092643Y5 |
| DBxref | InterPro:IPR023674 |
| DBxref | InterPro:IPR016095 |
| DBxref | InterPro:IPR028364 |
| DBxref | PFAM:PF00687 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1529836..1530930 + |
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