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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1534167..1535491- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000673-T1 ID=KJC3_000673-T1|Name=KJC3_000673-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1325bp|location=Sequence derived from alignment at ch1:1534167..1535491- (Aspergillus niger KJC3)
ATGACGCAGAAAAAAAGCCCACCCGAAATCGGCTCGCCATCGCCATCCCC
AGAACACCTCGACCTTCACCACTTCTTCAACCCAACCAGATACAAATACA
TAGCAGAGCGGATACTCAAGATGCCTCTCGACGGGGTGAAGAATGTTGTG
CTGGTGAGTATTACTCTTCATTTACCTGAGCTCCAGCTCCAAACATCATT
GCGACAACCCCTCCTCTCTTATCGATAACACCGCGCAACTGCGCACAGGA
TGGAAGGATGGCCACACCTACACATACAATGCGCGCACATCCTATCTACC
TCTATCCATCTATACACCTTCCAATACATTGTCCAGAGAGAAGCTAACAA
GCTATCTCCCAGGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGT
AACCCTGCAACTCGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTA
TCCTGGACATCGATCTCACCGGCCCTTCAATCCCACGATTAGTCGGTCTC
GAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGT
TCACCCTTCCACCATCATCACCACACCCAATGCCTCCTCCACCTCACAAC
CAGATACAACAACAACGGCAACAGAAACAGAAGGTGGAAGCGCCATAAAA
CACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTC
CGATGCCGTAATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAAT
TCCTCTCCGATGTGCTGTGGAATGAAACTGATTACTTGCTTATTGATACG
CCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGAC
GCTTTGTACGATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTG
GTGCGGTACTGGTCACTACACCACAGGCGGTAGCAACGTCTGATGTACGG
AAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGT
GGAGAATATGTCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACC
TGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGG
TTTTTGGGAAAGGTACCCGTTGACGTTGGGTTTGGGGAATTGGTGGAGGG
GAAGATTGGTGGGGAGGAGGATAGTGAGGATGAGGATGAGGATACTAATG
GGGAGAAGAAGGAGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGG
TATCGGGAATGTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACGTT
GATTGCGGAGATTGAGGGGCAATGA back to topCoding sequence (CDS) from alignment at ch1:1534167..1535491- >KJC3_000673-T1 ID=KJC3_000673-T1|Name=KJC3_000673-T1|organism=Aspergillus niger KJC3|type=CDS|length=2232bp|location=Sequence derived from alignment at ch1:1534167..1535491- (Aspergillus niger KJC3)
GTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACT
CGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCG
ATCTCACCGGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAA
ATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCAC
CATCATCACCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAA
CAACGGCAACAGAAACAGAAGGTGGAAGCGCCATAAAACACGGCTCTCTC
CGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAAT
CTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATG
TGCTGTGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACT
AGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACGAT
CGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGG
TCACTACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAAT
TTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTC
TGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTG
GTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAG
GTACCCGTTGACGTTGGGTTTGGGGAATTGGTGGAGGGGAAGATTGGTGG
GGAGGAGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGG
AGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGT
TGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATTGCGGAGAT
TGAGGGGCAATGAATGACGCAGAAAAAAAGCCCACCCGAAATCGGCTCGC
CATCGCCATCCCCAGAACACCTCGACCTTCACCACTTCTTCAACCCAACC
AGATACAAATACATAGCAGAGCGGATACTCAAGATGCCTCTCGACGGGGT
GAAGAATGTTGTGCTGGTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCA
GCGTAACCCTGCAACTCGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTT
GGTATCCTGGACATCGATCTCACCGGCCCTTCAATCCCACGATTAGTCGG
TCTCGAAGACGCAAAAATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTC
CCGTTCACCCTTCCACCATCATCACCACACCCAATGCCTCCTCCACCTCA
CAACCAGATACAACAACAACGGCAACAGAAACAGAAGGTGGAAGCGCCAT
AAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCC
GGTCCGATGCCGTAATCTGGCGCGGGCCCAAAAAGACAGCCATGATCCGC
CAATTCCTCTCCGATGTGCTGTGGAATGAAACTGATTACTTGCTTATTGA
TACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCGGAGCAGCTCT
TGACGCTTTGTACGATCGATGCTTCCTCTGCAACTGGAATGCCTCGACTG
GCTGGTGCGGTACTGGTCACTACACCACAGGCGGTAGCAACGTCTGATGT
ACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCGATGCTGGGGG
TGGTGGAGAATATGTCTGGTTATACGTGTCCGTGCTGTGGGGAGGTGACG
AACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGT
AAGGTTTTTGGGAAAGGTACCCGTTGACGTTGGGTTTGGGGAATTGGTGG
AGGGGAAGATTGGTGGGGAGGAGGATAGTGAGGATGAGGATGAGGATACT
AATGGGGAGAAGAAGGAGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGGA
AAGGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAGGACTTTTCGAAGA
CGTTGATTGCGGAGATTGAGGGGCAATGAATGACGCAGAAAAAAAGCCCA
CCCGAAATCGGCTCGCCATCGCCATCCCCAGAACACCTCGACCTTCACCA
CTTCTTCAACCCAACCAGATACAAATACATAGCAGAGCGGATACTCAAGA
TGCCTCTCGACGGGGTGAAGAATGTTGTGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016226 | iron-sulfur cluster assembly |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR028600 |
| DBxref | InterPro:IPR019591 |
| DBxref | InterPro:IPR033756 |
| DBxref | PFAM:PF01656 |
| Product | cytosolic Fe-S cluster assembly factor cfd1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1534167..1535491 - |
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