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KJC3_000674-T1, KJC3_000674-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000674-T1
Unique NameKJC3_000674-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1535844..1537116-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000674-T1 ID=KJC3_000674-T1|Name=KJC3_000674-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1273bp|location=Sequence derived from alignment at ch1:1535844..1537116- (Aspergillus niger KJC3)
ATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCAT
GACTAGGACGGATCCTCACGAGGTACATGTTAATCATCCCAGACTGAGCT
ATGGTTGCTAACTACATACTTCATCTCAGGCGCAAGGCTATCTCGCAGCC
AACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGA
TGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCA
CTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCAT
TCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAA
GAAGTTTGCGACCCTGAACGACTTTGCGTCGGGTGGTGGAGAATCTTCAG
AGGAAGACGATGCAGGTAACCAGGACTTCTTCGCTGGAGGGGAGAAGTCG
GGCTTGGCTGTGCAGAACCCCGATGATATTAAGAAGAAGATCATTGAAAA
GGCCAAAAGGTGAGGTCTTTTGGATACTCTTGGTTGGTCAGGGCTGATAT
GTTTATAGGGCTCAACCTCCACCATCGGACGAACCTACCAGAAGGTCTTT
CTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGG
TAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACAT
AGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCT
GTTCAACTCCGACGACCCCGCCAACCGCGAAATCCTCGAGGGTATCCGCC
AGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTG
GACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAA
GTACAAGCCCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTG
GTGTGAGCGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACC
GAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCA
GATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCC
ATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCCCAGTAGC
CAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTC
TGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCG
TGGTGGTACAGAAGTGGCAATAA
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Coding sequence (CDS) from alignment at ch1:1535844..1537116-

>KJC3_000674-T1 ID=KJC3_000674-T1|Name=KJC3_000674-T1|organism=Aspergillus niger KJC3|type=CDS|length=3501bp|location=Sequence derived from alignment at ch1:1535844..1537116- (Aspergillus niger KJC3)
GGCTCAACCTCCACCATCGGACGAACCTACCAGAAGGTCTTTCTTCACCG
GCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGGTAATCGAA
GCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACATAGAACCCT
ACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCTGTTCAACT
CCGACGACCCCGCCAACCGCGAAATCCTCGAGGGTATCCGCCAGGGCCGT
GCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTGGACGTGGA
GATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAAGTACAAGC
CCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTGGTGTGAGC
GCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACCGAGCCAGC
CAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCAGATCCGCC
TTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCCATACCATT
GGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCCCAGTAGCCAGTCGCG
TCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTCTGACAAGA
GTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCGTGGTGGTA
CAGAAGTGGCAATAAGCGCAAGGCTATCTCGCAGCCAACGAGTGGGACCT
CGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGATGAAGCTTCACAGG
ATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCACTGAATCGGAACCC
TCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCATTCCCCCTCCATTAC
CCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAAGAAGTTTGCGACCC
TGAACGACTTTGCGTCGGGTGGTGGAGAATCTTCAGAGGAAGACGATGCA
GGTAACCAGGACTTCTTCGCTGGAGGGGAGAAGTCGGGCTTGGCTGTGCA
GAACCCCGATGATATTAAGAAGAAGATCATTGAAAAGGCCAAAAGATGGA
GCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCATGACTA
GGACGGATCCTCACGAGGGCTCAACCTCCACCATCGGACGAACCTACCAG
AAGGTCTTTCTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGCTC
CCAGCAGGGTAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAG
CGCGTACATAGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGATGA
CGGAGAGCTGTTCAACTCCGACGACCCCGCCAACCGCGAAATCCTCGAGG
GTATCCGCCAGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGC
CAGGAGGTGGACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAGCC
CAAGCCTAAGTACAAGCCCTTCTCCGGGGCTGGACAGCGCCTCGGCAGCC
CCACGCCTGGTGTGAGCGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGT
CAGTCTACCGAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGT
GACTCTTCAGATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCA
ACACCACCCATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGC
CCCAGTAGCCAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGCAA
GGATCTTTCTGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGC
GGGGCGGCGTGGTGGTACAGAAGTGGCAATAAGCGCAAGGCTATCTCGCA
GCCAACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACA
AGATGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGG
GCACTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCT
CATTCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAA
AAAGAAGTTTGCGACCCTGAACGACTTTGCGTCGGGTGGTGGAGAATCTT
CAGAGGAAGACGATGCAGGTAACCAGGACTTCTTCGCTGGAGGGGAGAAG
TCGGGCTTGGCTGTGCAGAACCCCGATGATATTAAGAAGAAGATCATTGA
AAAGGCCAAAAGATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCA
ATTCTGCGCCATGACTAGGACGGATCCTCACGAGGGCTCAACCTCCACCA
TCGGACGAACCTACCAGAAGGTCTTTCTTCACCGGCACAGCACGTACCCT
TGGTGGTGATGAGGCTCCCAGCAGGGTAATCGAAGCCCCCAGTGCACCTG
TTTCGCAGACACCGCAGCGCGTACATAGAACCCTACACTTCTGGTCAGAT
GGCTTCTCTGTTGATGACGGAGAGCTGTTCAACTCCGACGACCCCGCCAA
CCGCGAAATCCTCGAGGGTATCCGCCAGGGCCGTGCCCCGCTCTCCATCA
TGAATGTGCAGGCTGGCCAGGAGGTGGACGTGGAGATCAAACAGCACGAC
GAGAAATACGTGAAGCCCAAGCCTAAGTACAAGCCCTTCTCCGGGGCTGG
ACAGCGCCTCGGCAGCCCCACGCCTGGTGTGAGCGCACCTGCGCCAGCAG
CAGCTCCTACTCCCAGTCAGTCTACCGAGCCAGCCAAGCCGGACGTAGAT
GAGTCGCAGCCGATAGTGACTCTTCAGATCCGCCTTGGAGACGGCTCACG
GCTCACTTCCCGGTTCAACACCACCCATACCATTGGTGACGTGTACCAGT
TTGTGTCCGCTGCCAGCCCCAGTAGCCAGTCGCGTCCCTGGGTATTGATG
ACTACGTTCCCCAGCAAGGATCTTTCTGACAAGAGTGTTGTGCTGGGTGA
TATGGCGGAGTTTAAGCGGGGCGGCGTGGTGGTACAGAAGTGGCAATAAG
CGCAAGGCTATCTCGCAGCCAACGAGTGGGACCTCGAAGCCGCAGTGACC
GAATTCTTCGCCGAACAAGATGAAGCTTCACAGGATACTGGTGCGGCTGG
TGGTGGTCGCCGACTGGGCACTGAATCGGAACCCTCTGCAGGCCGTTCGC
TTGGTGGCAGCTCCTCTCATTCCCCCTCCATTACCCCGCAGCCCTCGTCC
CGCAGGTCGGCCCCGAAAAAGAAGTTTGCGACCCTGAACGACTTTGCGTC
GGGTGGTGGAGAATCTTCAGAGGAAGACGATGCAGGTAACCAGGACTTCT
TCGCTGGAGGGGAGAAGTCGGGCTTGGCTGTGCAGAACCCCGATGATATT
AAGAAGAAGATCATTGAAAAGGCCAAAAGATGGAGCACAACGCGGATCGT
GATGAGATTGTCTCTCAATTCTGCGCCATGACTAGGACGGATCCTCACGA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBX1KJC3_000674Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000674-T1KJC3_000674-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000674-T1.cdsKJC3_000674-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000674-T1.exon3KJC3_000674-T1.exon3Aspergillus niger KJC3exon
KJC3_000674-T1.exon2KJC3_000674-T1.exon2Aspergillus niger KJC3exon
KJC3_000674-T1.exon1KJC3_000674-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG0926423H
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR036241
DBxrefInterPro:IPR001012
DBxrefInterPro:IPR012989
DBxrefPFAM:PF00789
DBxrefPFAM:PF14555
DBxrefPFAM:PF08059
ProductUBX domain-containing protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1535844..1537116 -
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