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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1538708..1540615+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000676-T1 ID=KJC3_000676-T1|Name=KJC3_000676-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1908bp|location=Sequence derived from alignment at ch1:1538708..1540615+ (Aspergillus niger KJC3)
ATTTCCCCAATTCATCTCCTCCGCCTTCATACCAATTCTCACCATGTTGG
GAGGGACTGGTCTCAGTGGACGCGGCGTCTTGCCCGCCGTGGCCCGGCAA
CGGTTGTATGCCTTCTCTCGTTCCAGCCGATCGGTTTGTCTTCCGCCGCA
GTCATCTCTTGTCGGCTCCAGTACGAGGTTGTTGACTTTGCCCTACAGAT
GTCCTCTTTCCGTCCGCAGACCCTGAGAACCGCCGTCCCATATGGTCAAT
CCAAGCAGACGCTGCTTGGAACACGCTCCTGGCGTCCTGCCACTGCCATC
ACCGGAGTGGCCGCCGCTCGCTTCAATTCCACCTCTTCGGCTCCTTCATC
GACTACTGTCTCGGACCCGGCGGCCAGTGATGTCTCTCTCGCACCTCAAG
GAGAAGTCAACCTCAATGATCTGACCGCGGCTGATATCAATGCGATCCCG
GAGCAGATTGGATATTTGAAGCAATTGGGCTTGGATTTCGGCTGGGGTTT
TTCGTCCATGATCGAATACAGCGTTGAGCATTTCCATATCATGGGTGGTC
TCCCCTGGTGGGGTGCGATTGTCGCAACCGGTCTCTTCGTTCGTCTGGGT
CTTCTGTACCCTACGCTTATGGCTGCGGACACTAGTACCAAGCTCAACAA
CATCAAGCACCTCACCACTCCGCTTCGGACGGAGATGGTTCAGGCCAACT
ACAAGAACGACCTGATGGAAGCGACACGGAAGCGGGCGGAGCTGAGCCAG
CTACACAAGGACCACGGTATCAAGCCCTGGAAAGCGATGATCCCGATGAT
TCATATCCCCTTCGGTTTTGGTTGTTACCGCGTCGTCAACAACATGTGCA
GTCTGCCGGTGCCCGGACTGACTACGGAACACGTTGCCTGGCTTCAGGAC
CTTACTGTTTCCGATCCCTACTATATTCTTCCTTTGATTGGATCGGTCAT
CCTACATCACACTCTCAAGGTGCGAAATTATATCTTTTCTTCCCCAACGT
CTAGCTGATGCAGTTGCTTGTAGAAAGGAGGAGAGACCGGAATGAACCAG
ATGAAAGACTCTGCTTTCAAGAGCCTTTTCCTCTACGGCATGCCCACCAT
TTCGTTCCTGTTCATGGCCAACTTCCCCGGTGCCCTTCAGCTCTACTTCT
TGACCACCAGTGTGTTTGCTCTGGGGCAAACGTACCTGCTTAGCTCGGCT
ACCTTCCGGAAGATGGCCGGTATCACCCTGGTGGATCATAACGTCCCGAA
GCCCGACGAACAGCCAAAAAACGACCTTGGCCTCCGCTTGATCAACGAGG
TACCTGACAAGGAGGCCGTCCAGAAGGCGGCTGCGGAGGCCGAACGCGAA
AGGTTGAGTCTCATTGATCGTACCCTTGGACAAGTCAAGGAGACTGGGTC
GAAGCTCAAGGATGAGATGCAGAAGAAGGTTGAGGAGTACCGGGGCAGCG
GTCCTACCAAGAACGCGGATGGAACTGTTTCCGCGGGCCCTCGACTCAGT
GAGAAGGACCGCAAGCTGGCGGAGGACTACGAGAGACGGCGTTCTGAGGA
GGAGGCGTGGAAGCGCGAGGAGCGGAACCATGCCCGCCGCGAGGCTCATC
TGAGGGCCATGGAGCTGCAGCGCCAGAAGGCTGCGCAGGCGAGCCGGCAA
TGAGTGCATTGATATGACCAGGCGTGAAGGGCTCCAGCGTGATGTTTTAT
TGTAATTATCTGTATTATATTGATGCTATCTCATTCTCATTCACCTCGGC
TGTTTTATAGGAATAGATTAGGTTTTGTTAACCATGGAATACCTGATGCA
TAGTTGGTGAACGTGAAGACATCCACAACATCTTGTTGGCCCCGTTCACT
AGCCATCCTGAGGCTGTCACTCATGCTTAGTCGCCACCAAATAGCTTCAC
TGGCCCTG back to topCoding sequence (CDS) from alignment at ch1:1538708..1540615+ >KJC3_000676-T1 ID=KJC3_000676-T1|Name=KJC3_000676-T1|organism=Aspergillus niger KJC3|type=CDS|length=4473bp|location=Sequence derived from alignment at ch1:1538708..1540615+ (Aspergillus niger KJC3)
ATGTTGGGAGGGACTGGTCTCAGTGGACGCGGCGTCTTGCCCGCCGTGGC
CCGGCAACGGTTGTATGCCTTCTCTCGTTCCAGCCGATCGATGTCCTCTT
TCCGTCCGCAGACCCTGAGAACCGCCGTCCCATATGGTCAATCCAAGCAG
ACGCTGCTTGGAACACGCTCCTGGCGTCCTGCCACTGCCATCACCGGAGT
GGCCGCCGCTCGCTTCAATTCCACCTCTTCGGCTCCTTCATCGACTACTG
TCTCGGACCCGGCGGCCAGTGATGTCTCTCTCGCACCTCAAGGAGAAGTC
AACCTCAATGATCTGACCGCGGCTGATATCAATGCGATCCCGGAGCAGAT
TGGATATTTGAAGCAATTGGGCTTGGATTTCGGCTGGGGTTTTTCGTCCA
TGATCGAATACAGCGTTGAGCATTTCCATATCATGGGTGGTCTCCCCTGG
TGGGGTGCGATTGTCGCAACCGGTCTCTTCGTTCGTCTGGGTCTTCTGTA
CCCTACGCTTATGGCTGCGGACACTAGTACCAAGCTCAACAACATCAAGC
ACCTCACCACTCCGCTTCGGACGGAGATGGTTCAGGCCAACTACAAGAAC
GACCTGATGGAAGCGACACGGAAGCGGGCGGAGCTGAGCCAGCTACACAA
GGACCACGGTATCAAGCCCTGGAAAGCGATGATCCCGATGATTCATATCC
CCTTCGGTTTTGGTTGTTACCGCGTCGTCAACAACATGTGCAGTCTGCCG
GTGCCCGGACTGACTACGGAACACGTTGCCTGGCTTCAGGACCTTACTGT
TTCCGATCCCTACTATATTCTTCCTTTGATTGGATCGGTCATCCTACATC
ACACTCTCAAGAAAGGAGGAGAGACCGGAATGAACCAGATGAAAGACTCT
GCTTTCAAGAGCCTTTTCCTCTACGGCATGCCCACCATTTCGTTCCTGTT
CATGGCCAACTTCCCCGGTGCCCTTCAGCTCTACTTCTTGACCACCAGTG
TGTTTGCTCTGGGGCAAACGTACCTGCTTAGCTCGGCTACCTTCCGGAAG
ATGGCCGGTATCACCCTGGTGGATCATAACGTCCCGAAGCCCGACGAACA
GCCAAAAAACGACCTTGGCCTCCGCTTGATCAACGAGGTACCTGACAAGG
AGGCCGTCCAGAAGGCGGCTGCGGAGGCCGAACGCGAAAGGTTGAGTCTC
ATTGATCGTACCCTTGGACAAGTCAAGGAGACTGGGTCGAAGCTCAAGGA
TGAGATGCAGAAGAAGGTTGAGGAGTACCGGGGCAGCGGTCCTACCAAGA
ACGCGGATGGAACTGTTTCCGCGGGCCCTCGACTCAGTGAGAAGGACCGC
AAGCTGGCGGAGGACTACGAGAGACGGCGTTCTGAGGAGGAGGCGTGGAA
GCGCGAGGAGCGGAACCATGCCCGCCGCGAGGCTCATCTGAGGGCCATGG
AGCTGCAGCGCCAGAAGGCTGCGCAGGCGAGCCGGCAATGAATGTTGGGA
GGGACTGGTCTCAGTGGACGCGGCGTCTTGCCCGCCGTGGCCCGGCAACG
GTTGTATGCCTTCTCTCGTTCCAGCCGATCGATGTCCTCTTTCCGTCCGC
AGACCCTGAGAACCGCCGTCCCATATGGTCAATCCAAGCAGACGCTGCTT
GGAACACGCTCCTGGCGTCCTGCCACTGCCATCACCGGAGTGGCCGCCGC
TCGCTTCAATTCCACCTCTTCGGCTCCTTCATCGACTACTGTCTCGGACC
CGGCGGCCAGTGATGTCTCTCTCGCACCTCAAGGAGAAGTCAACCTCAAT
GATCTGACCGCGGCTGATATCAATGCGATCCCGGAGCAGATTGGATATTT
GAAGCAATTGGGCTTGGATTTCGGCTGGGGTTTTTCGTCCATGATCGAAT
ACAGCGTTGAGCATTTCCATATCATGGGTGGTCTCCCCTGGTGGGGTGCG
ATTGTCGCAACCGGTCTCTTCGTTCGTCTGGGTCTTCTGTACCCTACGCT
TATGGCTGCGGACACTAGTACCAAGCTCAACAACATCAAGCACCTCACCA
CTCCGCTTCGGACGGAGATGGTTCAGGCCAACTACAAGAACGACCTGATG
GAAGCGACACGGAAGCGGGCGGAGCTGAGCCAGCTACACAAGGACCACGG
TATCAAGCCCTGGAAAGCGATGATCCCGATGATTCATATCCCCTTCGGTT
TTGGTTGTTACCGCGTCGTCAACAACATGTGCAGTCTGCCGGTGCCCGGA
CTGACTACGGAACACGTTGCCTGGCTTCAGGACCTTACTGTTTCCGATCC
CTACTATATTCTTCCTTTGATTGGATCGGTCATCCTACATCACACTCTCA
AGAAAGGAGGAGAGACCGGAATGAACCAGATGAAAGACTCTGCTTTCAAG
AGCCTTTTCCTCTACGGCATGCCCACCATTTCGTTCCTGTTCATGGCCAA
CTTCCCCGGTGCCCTTCAGCTCTACTTCTTGACCACCAGTGTGTTTGCTC
TGGGGCAAACGTACCTGCTTAGCTCGGCTACCTTCCGGAAGATGGCCGGT
ATCACCCTGGTGGATCATAACGTCCCGAAGCCCGACGAACAGCCAAAAAA
CGACCTTGGCCTCCGCTTGATCAACGAGGTACCTGACAAGGAGGCCGTCC
AGAAGGCGGCTGCGGAGGCCGAACGCGAAAGGTTGAGTCTCATTGATCGT
ACCCTTGGACAAGTCAAGGAGACTGGGTCGAAGCTCAAGGATGAGATGCA
GAAGAAGGTTGAGGAGTACCGGGGCAGCGGTCCTACCAAGAACGCGGATG
GAACTGTTTCCGCGGGCCCTCGACTCAGTGAGAAGGACCGCAAGCTGGCG
GAGGACTACGAGAGACGGCGTTCTGAGGAGGAGGCGTGGAAGCGCGAGGA
GCGGAACCATGCCCGCCGCGAGGCTCATCTGAGGGCCATGGAGCTGCAGC
GCCAGAAGGCTGCGCAGGCGAGCCGGCAATGAATGTTGGGAGGGACTGGT
CTCAGTGGACGCGGCGTCTTGCCCGCCGTGGCCCGGCAACGGTTGTATGC
CTTCTCTCGTTCCAGCCGATCGATGTCCTCTTTCCGTCCGCAGACCCTGA
GAACCGCCGTCCCATATGGTCAATCCAAGCAGACGCTGCTTGGAACACGC
TCCTGGCGTCCTGCCACTGCCATCACCGGAGTGGCCGCCGCTCGCTTCAA
TTCCACCTCTTCGGCTCCTTCATCGACTACTGTCTCGGACCCGGCGGCCA
GTGATGTCTCTCTCGCACCTCAAGGAGAAGTCAACCTCAATGATCTGACC
GCGGCTGATATCAATGCGATCCCGGAGCAGATTGGATATTTGAAGCAATT
GGGCTTGGATTTCGGCTGGGGTTTTTCGTCCATGATCGAATACAGCGTTG
AGCATTTCCATATCATGGGTGGTCTCCCCTGGTGGGGTGCGATTGTCGCA
ACCGGTCTCTTCGTTCGTCTGGGTCTTCTGTACCCTACGCTTATGGCTGC
GGACACTAGTACCAAGCTCAACAACATCAAGCACCTCACCACTCCGCTTC
GGACGGAGATGGTTCAGGCCAACTACAAGAACGACCTGATGGAAGCGACA
CGGAAGCGGGCGGAGCTGAGCCAGCTACACAAGGACCACGGTATCAAGCC
CTGGAAAGCGATGATCCCGATGATTCATATCCCCTTCGGTTTTGGTTGTT
ACCGCGTCGTCAACAACATGTGCAGTCTGCCGGTGCCCGGACTGACTACG
GAACACGTTGCCTGGCTTCAGGACCTTACTGTTTCCGATCCCTACTATAT
TCTTCCTTTGATTGGATCGGTCATCCTACATCACACTCTCAAGAAAGGAG
GAGAGACCGGAATGAACCAGATGAAAGACTCTGCTTTCAAGAGCCTTTTC
CTCTACGGCATGCCCACCATTTCGTTCCTGTTCATGGCCAACTTCCCCGG
TGCCCTTCAGCTCTACTTCTTGACCACCAGTGTGTTTGCTCTGGGGCAAA
CGTACCTGCTTAGCTCGGCTACCTTCCGGAAGATGGCCGGTATCACCCTG
GTGGATCATAACGTCCCGAAGCCCGACGAACAGCCAAAAAACGACCTTGG
CCTCCGCTTGATCAACGAGGTACCTGACAAGGAGGCCGTCCAGAAGGCGG
CTGCGGAGGCCGAACGCGAAAGGTTGAGTCTCATTGATCGTACCCTTGGA
CAAGTCAAGGAGACTGGGTCGAAGCTCAAGGATGAGATGCAGAAGAAGGT
TGAGGAGTACCGGGGCAGCGGTCCTACCAAGAACGCGGATGGAACTGTTT
CCGCGGGCCCTCGACTCAGTGAGAAGGACCGCAAGCTGGCGGAGGACTAC
GAGAGACGGCGTTCTGAGGAGGAGGCGTGGAAGCGCGAGGAGCGGAACCA
TGCCCGCCGCGAGGCTCATCTGAGGGCCATGGAGCTGCAGCGCCAGAAGG
CTGCGCAGGCGAGCCGGCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0032977 | membrane insertase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000676-T1.utr5p1 | KJC3_000676-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000676-T1.utr3p1 | KJC3_000676-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001708 |
| DBxref | PFAM:PF02096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1538708..1540615 + |
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