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KJC3_000687-T1, KJC3_000687-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000687-T1
Unique NameKJC3_000687-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1568985..1571289-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000687-T1 ID=KJC3_000687-T1|Name=KJC3_000687-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2305bp|location=Sequence derived from alignment at ch1:1568985..1571289- (Aspergillus niger KJC3)
TCCCATCGCACTTCAGGCAGGATGAGGGAATGTTGAGGATGTTGATGATG
ATAATGCGCATCCATTCCCGTCTTGCATAATGACTCTGGGATCTTTTCGC
TAATTGATATATTGTATTTTTAAAGATACACTACATCGCATCACGAGGGA
CAAGCTGCCTCTCGTGTAATGGCTTGACCAACCCCAGATCTTGCACAGGA
TTTCGGGTAAGCTTCAGCCAGCAGCCTTGTCGGTCTTGCTGGAAGGATTT
TTGCTTTCATTGTTTTCTCCGGTGATGATCACATACCTAAGCTTAGGCAA
TGGCAACCTTGATTTCTCGCTGTTGTCGATGAAGGCTTTGTATTGACTAC
AACGGTATCTGAGGAGAAACACAACAATGATTCTGATTACTTCTGTCGGG
GTTGGCGATGGCGGCTACATTCCAGCTTGTAACTGAAGAGTTTCTTGCTG
ACTCTTCCCTGTAGTTAGAGAATCGAAAATATCTATCCAATTGAGCTTAT
AAGATTTACTGTTAAATATGGCTTCCAATACAATTCCTAGTCCTGCTTCG
GAGACTGTTGCTCCTGGCAAATCCGACTTTTCTCAGAAAAACAATGCCTC
CCCAGCTCGTCGTTCGCGGCCTCCAAGGCCCAATTACCGACACATCCATC
GCTTCCCCTTCCCGGTCGAGGTGCATCCTCTCCCTCCTCTCATCCCCCAT
AACCCTCTCTCGCTCGTCAGTGTGCTGCTGTCCTACCTGACGTACTTTAT
TTCTCCCCCTCATCAGGAAGTCTACTCCGCCTACTTTGACTCGGCCACAT
CCTCGGTTCATGTCACAGACCCTAAGGCTATAAAAGCCCTCTGGGAGATG
GGTTTCTTTGGTAAGGGAACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGA
GCGTGAGAAGAAGAGACGAGGATTACTTGGGGGGATGACTAGCGAAGAGG
TCACACGACAGCGGCGGACGGAACGTCGCGAGTTGAAACTGGAGCGCGCG
AGGATGGAAAAGCTTGCCATTGAGGAGAGACTCAAGGCCGAAGCGGCTGC
CAGGGAAGGCACTGCGACGCCAAACGAACAGTCATCCCTCTCACCCACTC
CGAATGGTGTCTCTGAAGGCACAGTACCAATTACGGAGAAGTTCTCCCTG
AGAAAAGCACGGGAAGCCAGGGAAGCCAAGCTCCTTGAGTCACAACGTCC
AGTATCACAAGACGGCAATACACGCACCCCTAACTCCGCCGGAAAGCGGT
CACCTAGTGGCAGCAAAACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAG
GAGTTCGCTTCTGATTCGGCTATCTTGAGCTTGCCAGAAATGTCTGCAGA
TAGAAATACGGACGGAGGTAAGGCGAATGATGAGCCAGAATTAAGTAATG
AAGAGCACCTTCAATTATCTAACGAAGAGGCCTTCTTCCTTGCATATGGG
CTGGGAGTCTTGCGTGTGCGCGATGATACTCGCACATCCGAGATTCCTAC
ATCTTCCCTGTTGCCATTATTATGTCAACACTCTTACTTCCCTCCTGGAG
CTCCGTCAGCGGATCCCACGCCGGACGACCCATTCATGATATCCTATGTT
GTGTACCACCATTTCCGGTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAA
ATTCGGTGTGGACTATATCCTCTACAACCGTGGGCCGGTCTTCTCACATG
CTGAGTTTGCTGTCGTGGTTGTCCCGTCCTATGGTCATGGCTACTGGTCT
GAAACGGCCGAGCGCAAGGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTG
GTGGTGGCTGCATTGTGTCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCT
TGGTAGTATGCTATGTGGAAGTGCCTCCGCCAACGTCCTACGAGCTTGAC
ACTCCCTCGGAAGAGGATATTGGTGCAATGTTGGCTCGTTATCAAGTCCG
GGAGATGGTTATTCGAAGATGGGTCCCCAATCGGACTCGGGACTAAGATG
GGTACATCATCTGGTTTCTCTGTACTATATGCAGCGTGTTGTTCGAGCGT
TTGGGTTTTCTTTTGGCAAGACGTAAAGCACTTCACTCATTGTAACCATA
TGTAACCCTGCTCCTCTCACGAACACAATGGTTGGCATTGCTGATCGTGA
AATTCCGAATTGACGAATGCAACGTTAACCTACTCCTGCGCTCCTTATAT
AGTACTGTTCATCCTCTTGTTCTATAGATGGACGGTAGATAGTCTTTCCA
GGCTTATCAATTTGGTGAAGCTAAACCTGGAGCGGTAATATTGACATATC
ACGTG
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Coding sequence (CDS) from alignment at ch1:1568985..1571289-

>KJC3_000687-T1 ID=KJC3_000687-T1|Name=KJC3_000687-T1|organism=Aspergillus niger KJC3|type=CDS|length=1479bp|location=Sequence derived from alignment at ch1:1568985..1571289- (Aspergillus niger KJC3)
ATGGCTTCCAATACAATTCCTAGTCCTGCTTCGGAGACTGTTGCTCCTGG
CAAATCCGACTTTTCTCAGAAAAACAATGCCTCCCCAGCTCGTCGTTCGC
GGCCTCCAAGGCCCAATTACCGACACATCCATCGCTTCCCCTTCCCGGTC
GAGGTGCATCCTCTCCCTCCTCTCATCCCCCATAACCCTCTCTCGCTCGT
CAGTGTGCTGCTGTCCTACCTGACGTACTTTATTTCTCCCCCTCATCAGG
AAGTCTACTCCGCCTACTTTGACTCGGCCACATCCTCGGTTCATGTCACA
GACCCTAAGGCTATAAAAGCCCTCTGGGAGATGGGTTTCTTTGGTAAGGG
AACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGAGCGTGAGAAGAAGAGAC
GAGGATTACTTGGGGGGATGACTAGCGAAGAGGTCACACGACAGCGGCGG
ACGGAACGTCGCGAGTTGAAACTGGAGCGCGCGAGGATGGAAAAGCTTGC
CATTGAGGAGAGACTCAAGGCCGAAGCGGCTGCCAGGGAAGGCACTGCGA
CGCCAAACGAACAGTCATCCCTCTCACCCACTCCGAATGGTGTCTCTGAA
GGCACAGTACCAATTACGGAGAAGTTCTCCCTGAGAAAAGCACGGGAAGC
CAGGGAAGCCAAGCTCCTTGAGTCACAACGTCCAGTATCACAAGACGGCA
ATACACGCACCCCTAACTCCGCCGGAAAGCGGTCACCTAGTGGCAGCAAA
ACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAGGAGTTCGCTTCTGATTC
GGCTATCTTGAGCTTGCCAGAAATGTCTGCAGATAGAAATACGGACGGAG
GTAAGGCGAATGATGAGCCAGAATTAAGTAATGAAGAGCACCTTCAATTA
TCTAACGAAGAGGCCTTCTTCCTTGCATATGGGCTGGGAGTCTTGCGTGT
GCGCGATGATACTCGCACATCCGAGATTCCTACATCTTCCCTGTTGCCAT
TATTATGTCAACACTCTTACTTCCCTCCTGGAGCTCCGTCAGCGGATCCC
ACGCCGGACGACCCATTCATGATATCCTATGTTGTGTACCACCATTTCCG
GTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAAATTCGGTGTGGACTATA
TCCTCTACAACCGTGGGCCGGTCTTCTCACATGCTGAGTTTGCTGTCGTG
GTTGTCCCGTCCTATGGTCATGGCTACTGGTCTGAAACGGCCGAGCGCAA
GGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTGGTGGTGGCTGCATTGTG
TCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCTTGGTAGTATGCTATGTG
GAAGTGCCTCCGCCAACGTCCTACGAGCTTGACACTCCCTCGGAAGAGGA
TATTGGTGCAATGTTGGCTCGTTATCAAGTCCGGGAGATGGTTATTCGAA
GATGGGTCCCCAATCGGACTCGGGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000214tRNA-intron endonuclease complex
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
Vocabulary: Molecular Function
TermDefinition
GO:0000213tRNA-intron endonuclease activity
GO:0004518nuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000687KJC3_000687Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000687-T1KJC3_000687-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000687-T1.cdsKJC3_000687-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000687-T1.utr3p1KJC3_000687-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000687-T1.exon2KJC3_000687-T1.exon2Aspergillus niger KJC3exon
KJC3_000687-T1.exon1KJC3_000687-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000687-T1.utr5p2KJC3_000687-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000687-T1.utr5p1KJC3_000687-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262WXK
DBxrefInterPro:IPR036167
DBxrefInterPro:IPR006677
DBxrefInterPro:IPR016589
DBxrefInterPro:IPR011856
DBxrefPFAM:PF01974
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1568985..1571289 -
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