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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1605791..1608164- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000703-T1 ID=KJC3_000703-T1|Name=KJC3_000703-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2374bp|location=Sequence derived from alignment at ch1:1605791..1608164- (Aspergillus niger KJC3)
TGTGAATTGCTTCTTCTCTTCTCCTCCCTTAACTACCTCTCTCCTTCTCT
TTCTCATCTGCCTCTCTGGAAGAGCTGCGTGAGCTAGTGATGGTCGATTC
CCATTCATCCGCGTAGATCGTGTCGACAGCTTCTCGACGCCATGGTGTCT
GTTCCCCGCGTAGCTGCTGCTACGAGCTCCGCGGCCCTCCGAGTGACGGC
CTTCTTCTTTCTCCGCTGGGTGCGTTGACCGTTCCTCATGGCCTATAAGA
TCATGGTAGCTAATTGGGACTGTATAGATTCCCGGCCATCACTTCCCACC
CCTCATAGTCACATTGTTGGCTGTGTACCTAGCTTCATTGGTGTCGCTTG
GCCGGCCGGCCGACCAGAGCAATGCCGATCGGCGCAAGGGCAATATCGAT
GCTCAACATGCTTCCAGTAAGTAGGGTCGACATGAGCAGACTCTACAACC
GTCAAAGGCACACAGAGTAACTTGCTATAGGATCCCCGCCGCCAACCGAA
GGCGTCCTCAAGGTTCTGCTGACTGGGCTGCCGTCCCCCCGACTACCGTT
GTCCACGCGTTTGACCGTCCTGATCAACATTGTCCTCGCTCTCCTCACCC
TAGACTTCGTGGGACGAGGCTTCATTCTCTATCCCAGCAATGATCTTGCT
TTCTCTCGTATCGGTTACGTCTCTCCGACTACCGCGAATTTGCTGGTCCG
TGAACCGGACCCGGCTCAGCTACCTTTGATCGTATACTATCAGCCAACGG
AGGAGGACCCCTCACGATGGACAGAAGAAGGCGTGATTTACTCACTGACG
GATGCGACGGACTTTACAACCACCGTAACTATCAAGAACTTGGAGCCATC
ATCCGCGTACCGCTATTCTCTATCCAACAATCTGACGGGCTCTTTCGTCA
CCGCGCCAATGCCGGGCTCAAAATCAGCCAACCGTCTGAGCTTCCTCACA
TCGAGCTGCATGAAGGCGAATTTCCCCTACAACCCCCTATCACATCCACT
ACGTATCCCGGGACTTGAGATGATGACAGAGACGGTCAACCGGCTGCCGT
CTCTGCTCCGACCAGCGTTCATGTTGTTCCTGGGGGATTTCATTTACGTT
GATGTGCCTCAGCGCTTTGGTTCCTCCATCTCTCACTACCGCAGCGAGTA
TCGCCGGGTCTATTCATCCCCATCATGGAACAAAGCCCAAGATGGTCTCC
CTTGGATTCATACACTCGATGACCACGAGATCGAGAATGACTGGTCCAAA
GGAAACACAACCGCGCCATATCCCGCCGCCGCAGAGCCCTACATCCATTA
CCACGTCAGCGCGAACCCTCCCATTCCGCCAACACCCTTTGCTAAGCCCG
AAAACACCACCTACTTCTCGTTCATCAATGGCCCGGCTTCATTCTTCATG
GTGGACACGCGCACCTACCGCTCCGAGCCCGCCCAGCCCAACTCCACCAT
CCTTGGCTCCGCACAGCTCCAGTCTCTCCTTGCCTTCCTCTCCCGTCCTG
AACCGGCCGAAGTCCGCTGGAAGATCGTAGCCTCCAGCGTTCCCTTCACC
AAGAACTGGCATGTCGGCACCACCGACACATGGGGTGGCTTCCTCAACGA
ACGTCGCACTGTCTTCGAAGCCATGTGGCGCGCAGAGCGTGAGCTAGGCG
TCCGCATTGTCCTCCTCAGCGGGGACCGTCATGAATTCGGAGCCACCCGT
TTCCCAGATCCCGAACTCGGCCTCACCCACGAAGAGCTCCTCCCAAACAC
AGCAGGCGAGGGACTGCATGAGTTCTGCGTCGGCCCCCTCAACATGTTCT
ACCTCCCCATCCGGACTTACCGCCAAGACGACAACGAAGACGTTGCCATC
AAATACATCCCCGATGGGAACACCAAGTACGGCCTCATCGACATTGACGT
CCAAGATGAGCTCATTACCACTCCCACTGGGAAGACCATCTCCGTCCCCA
GCTCCGTCTTCACTTACTCCCTGTACGTCAACACCGATTTAATCTGGAAA
TATTCCCTTGCTGTTCCTCTACCTGGCCACGAGGCTGCGGTCGCCTCCGC
GTCGACTTGGAAACACCCTCGCTTCCCACCGGGTAAGCTCCTCCTGGATG
ATCGCGAGCAAGTTACGTGGGATGCATCTATCAAGACGGTGATTGGCCGC
GTTGAGGAAACGGTAGGTCGAGTGCGTTCGTATGTATTGGGGCAGGCCTA
TGAATTATTGGATAGAGTTAGACGGGTGGAGAGGGTGGATTGATCCTGAT
TGGTATCGGTATCAGTCTTGGTGTTGGATCAGTTGATCTTACTTTTAATA
TTCCTTGCGTCTCTTTTTTAGTAATAGTTGCATTGTCGTTCTCAAGATAA
TTTAATTCGAACAGTCAACTTTCT back to topCoding sequence (CDS) from alignment at ch1:1605791..1608164- >KJC3_000703-T1 ID=KJC3_000703-T1|Name=KJC3_000703-T1|organism=Aspergillus niger KJC3|type=CDS|length=5940bp|location=Sequence derived from alignment at ch1:1605791..1608164- (Aspergillus niger KJC3)
GATCCCCGCCGCCAACCGAAGGCGTCCTCAAGGTTCTGCTGACTGGGCTG
CCGTCCCCCCGACTACCGTTGTCCACGCGTTTGACCGTCCTGATCAACAT
TGTCCTCGCTCTCCTCACCCTAGACTTCGTGGGACGAGGCTTCATTCTCT
ATCCCAGCAATGATCTTGCTTTCTCTCGTATCGGTTACGTCTCTCCGACT
ACCGCGAATTTGCTGGTCCGTGAACCGGACCCGGCTCAGCTACCTTTGAT
CGTATACTATCAGCCAACGGAGGAGGACCCCTCACGATGGACAGAAGAAG
GCGTGATTTACTCACTGACGGATGCGACGGACTTTACAACCACCGTAACT
ATCAAGAACTTGGAGCCATCATCCGCGTACCGCTATTCTCTATCCAACAA
TCTGACGGGCTCTTTCGTCACCGCGCCAATGCCGGGCTCAAAATCAGCCA
ACCGTCTGAGCTTCCTCACATCGAGCTGCATGAAGGCGAATTTCCCCTAC
AACCCCCTATCACATCCACTACGTATCCCGGGACTTGAGATGATGACAGA
GACGGTCAACCGGCTGCCGTCTCTGCTCCGACCAGCGTTCATGTTGTTCC
TGGGGGATTTCATTTACGTTGATGTGCCTCAGCGCTTTGGTTCCTCCATC
TCTCACTACCGCAGCGAGTATCGCCGGGTCTATTCATCCCCATCATGGAA
CAAAGCCCAAGATGGTCTCCCTTGGATTCATACACTCGATGACCACGAGA
TCGAGAATGACTGGTCCAAAGGAAACACAACCGCGCCATATCCCGCCGCC
GCAGAGCCCTACATCCATTACCACGTCAGCGCGAACCCTCCCATTCCGCC
AACACCCTTTGCTAAGCCCGAAAACACCACCTACTTCTCGTTCATCAATG
GCCCGGCTTCATTCTTCATGGTGGACACGCGCACCTACCGCTCCGAGCCC
GCCCAGCCCAACTCCACCATCCTTGGCTCCGCACAGCTCCAGTCTCTCCT
TGCCTTCCTCTCCCGTCCTGAACCGGCCGAAGTCCGCTGGAAGATCGTAG
CCTCCAGCGTTCCCTTCACCAAGAACTGGCATGTCGGCACCACCGACACA
TGGGGTGGCTTCCTCAACGAACGTCGCACTGTCTTCGAAGCCATGTGGCG
CGCAGAGCGTGAGCTAGGCGTCCGCATTGTCCTCCTCAGCGGGGACCGTC
ATGAATTCGGAGCCACCCGTTTCCCAGATCCCGAACTCGGCCTCACCCAC
GAAGAGCTCCTCCCAAACACAGCAGGCGAGGGACTGCATGAGTTCTGCGT
CGGCCCCCTCAACATGTTCTACCTCCCCATCCGGACTTACCGCCAAGACG
ACAACGAAGACGTTGCCATCAAATACATCCCCGATGGGAACACCAAGTAC
GGCCTCATCGACATTGACGTCCAAGATGAGCTCATTACCACTCCCACTGG
GAAGACCATCTCCGTCCCCAGCTCCGTCTTCACTTACTCCCTGTACGTCA
ACACCGATTTAATCTGGAAATATTCCCTTGCTGTTCCTCTACCTGGCCAC
GAGGCTGCGGTCGCCTCCGCGTCGACTTGGAAACACCCTCGCTTCCCACC
GGGTAAGCTCCTCCTGGATGATCGCGAGCAAGTTACGTGGGATGCATCTA
TCAAGACGGTGATTGGCCGCGTTGAGGAAACGGTAGGTCGAGTGCGTTCG
TATGTATTGGGGCAGGCCTATGAATTATTGGATAGAGTTAGACGGGTGGA
GAGGGTGGATTGAATTCCCGGCCATCACTTCCCACCCCTCATAGTCACAT
TGTTGGCTGTGTACCTAGCTTCATTGGTGTCGCTTGGCCGGCCGGCCGAC
CAGAGCAATGCCGATCGGCGCAAGGGCAATATCGATGCTCAACATGCTTC
CAATGGTGTCTGTTCCCCGCGTAGCTGCTGCTACGAGCTCCGCGGCCCTC
CGAGTGACGGCCTTCTTCTTTCTCCGCTGGGATCCCCGCCGCCAACCGAA
GGCGTCCTCAAGGTTCTGCTGACTGGGCTGCCGTCCCCCCGACTACCGTT
GTCCACGCGTTTGACCGTCCTGATCAACATTGTCCTCGCTCTCCTCACCC
TAGACTTCGTGGGACGAGGCTTCATTCTCTATCCCAGCAATGATCTTGCT
TTCTCTCGTATCGGTTACGTCTCTCCGACTACCGCGAATTTGCTGGTCCG
TGAACCGGACCCGGCTCAGCTACCTTTGATCGTATACTATCAGCCAACGG
AGGAGGACCCCTCACGATGGACAGAAGAAGGCGTGATTTACTCACTGACG
GATGCGACGGACTTTACAACCACCGTAACTATCAAGAACTTGGAGCCATC
ATCCGCGTACCGCTATTCTCTATCCAACAATCTGACGGGCTCTTTCGTCA
CCGCGCCAATGCCGGGCTCAAAATCAGCCAACCGTCTGAGCTTCCTCACA
TCGAGCTGCATGAAGGCGAATTTCCCCTACAACCCCCTATCACATCCACT
ACGTATCCCGGGACTTGAGATGATGACAGAGACGGTCAACCGGCTGCCGT
CTCTGCTCCGACCAGCGTTCATGTTGTTCCTGGGGGATTTCATTTACGTT
GATGTGCCTCAGCGCTTTGGTTCCTCCATCTCTCACTACCGCAGCGAGTA
TCGCCGGGTCTATTCATCCCCATCATGGAACAAAGCCCAAGATGGTCTCC
CTTGGATTCATACACTCGATGACCACGAGATCGAGAATGACTGGTCCAAA
GGAAACACAACCGCGCCATATCCCGCCGCCGCAGAGCCCTACATCCATTA
CCACGTCAGCGCGAACCCTCCCATTCCGCCAACACCCTTTGCTAAGCCCG
AAAACACCACCTACTTCTCGTTCATCAATGGCCCGGCTTCATTCTTCATG
GTGGACACGCGCACCTACCGCTCCGAGCCCGCCCAGCCCAACTCCACCAT
CCTTGGCTCCGCACAGCTCCAGTCTCTCCTTGCCTTCCTCTCCCGTCCTG
AACCGGCCGAAGTCCGCTGGAAGATCGTAGCCTCCAGCGTTCCCTTCACC
AAGAACTGGCATGTCGGCACCACCGACACATGGGGTGGCTTCCTCAACGA
ACGTCGCACTGTCTTCGAAGCCATGTGGCGCGCAGAGCGTGAGCTAGGCG
TCCGCATTGTCCTCCTCAGCGGGGACCGTCATGAATTCGGAGCCACCCGT
TTCCCAGATCCCGAACTCGGCCTCACCCACGAAGAGCTCCTCCCAAACAC
AGCAGGCGAGGGACTGCATGAGTTCTGCGTCGGCCCCCTCAACATGTTCT
ACCTCCCCATCCGGACTTACCGCCAAGACGACAACGAAGACGTTGCCATC
AAATACATCCCCGATGGGAACACCAAGTACGGCCTCATCGACATTGACGT
CCAAGATGAGCTCATTACCACTCCCACTGGGAAGACCATCTCCGTCCCCA
GCTCCGTCTTCACTTACTCCCTGTACGTCAACACCGATTTAATCTGGAAA
TATTCCCTTGCTGTTCCTCTACCTGGCCACGAGGCTGCGGTCGCCTCCGC
GTCGACTTGGAAACACCCTCGCTTCCCACCGGGTAAGCTCCTCCTGGATG
ATCGCGAGCAAGTTACGTGGGATGCATCTATCAAGACGGTGATTGGCCGC
GTTGAGGAAACGGTAGGTCGAGTGCGTTCGTATGTATTGGGGCAGGCCTA
TGAATTATTGGATAGAGTTAGACGGGTGGAGAGGGTGGATTGAATTCCCG
GCCATCACTTCCCACCCCTCATAGTCACATTGTTGGCTGTGTACCTAGCT
TCATTGGTGTCGCTTGGCCGGCCGGCCGACCAGAGCAATGCCGATCGGCG
CAAGGGCAATATCGATGCTCAACATGCTTCCAATGGTGTCTGTTCCCCGC
GTAGCTGCTGCTACGAGCTCCGCGGCCCTCCGAGTGACGGCCTTCTTCTT
TCTCCGCTGGGATCCCCGCCGCCAACCGAAGGCGTCCTCAAGGTTCTGCT
GACTGGGCTGCCGTCCCCCCGACTACCGTTGTCCACGCGTTTGACCGTCC
TGATCAACATTGTCCTCGCTCTCCTCACCCTAGACTTCGTGGGACGAGGC
TTCATTCTCTATCCCAGCAATGATCTTGCTTTCTCTCGTATCGGTTACGT
CTCTCCGACTACCGCGAATTTGCTGGTCCGTGAACCGGACCCGGCTCAGC
TACCTTTGATCGTATACTATCAGCCAACGGAGGAGGACCCCTCACGATGG
ACAGAAGAAGGCGTGATTTACTCACTGACGGATGCGACGGACTTTACAAC
CACCGTAACTATCAAGAACTTGGAGCCATCATCCGCGTACCGCTATTCTC
TATCCAACAATCTGACGGGCTCTTTCGTCACCGCGCCAATGCCGGGCTCA
AAATCAGCCAACCGTCTGAGCTTCCTCACATCGAGCTGCATGAAGGCGAA
TTTCCCCTACAACCCCCTATCACATCCACTACGTATCCCGGGACTTGAGA
TGATGACAGAGACGGTCAACCGGCTGCCGTCTCTGCTCCGACCAGCGTTC
ATGTTGTTCCTGGGGGATTTCATTTACGTTGATGTGCCTCAGCGCTTTGG
TTCCTCCATCTCTCACTACCGCAGCGAGTATCGCCGGGTCTATTCATCCC
CATCATGGAACAAAGCCCAAGATGGTCTCCCTTGGATTCATACACTCGAT
GACCACGAGATCGAGAATGACTGGTCCAAAGGAAACACAACCGCGCCATA
TCCCGCCGCCGCAGAGCCCTACATCCATTACCACGTCAGCGCGAACCCTC
CCATTCCGCCAACACCCTTTGCTAAGCCCGAAAACACCACCTACTTCTCG
TTCATCAATGGCCCGGCTTCATTCTTCATGGTGGACACGCGCACCTACCG
CTCCGAGCCCGCCCAGCCCAACTCCACCATCCTTGGCTCCGCACAGCTCC
AGTCTCTCCTTGCCTTCCTCTCCCGTCCTGAACCGGCCGAAGTCCGCTGG
AAGATCGTAGCCTCCAGCGTTCCCTTCACCAAGAACTGGCATGTCGGCAC
CACCGACACATGGGGTGGCTTCCTCAACGAACGTCGCACTGTCTTCGAAG
CCATGTGGCGCGCAGAGCGTGAGCTAGGCGTCCGCATTGTCCTCCTCAGC
GGGGACCGTCATGAATTCGGAGCCACCCGTTTCCCAGATCCCGAACTCGG
CCTCACCCACGAAGAGCTCCTCCCAAACACAGCAGGCGAGGGACTGCATG
AGTTCTGCGTCGGCCCCCTCAACATGTTCTACCTCCCCATCCGGACTTAC
CGCCAAGACGACAACGAAGACGTTGCCATCAAATACATCCCCGATGGGAA
CACCAAGTACGGCCTCATCGACATTGACGTCCAAGATGAGCTCATTACCA
CTCCCACTGGGAAGACCATCTCCGTCCCCAGCTCCGTCTTCACTTACTCC
CTGTACGTCAACACCGATTTAATCTGGAAATATTCCCTTGCTGTTCCTCT
ACCTGGCCACGAGGCTGCGGTCGCCTCCGCGTCGACTTGGAAACACCCTC
GCTTCCCACCGGGTAAGCTCCTCCTGGATGATCGCGAGCAAGTTACGTGG
GATGCATCTATCAAGACGGTGATTGGCCGCGTTGAGGAAACGGTAGGTCG
AGTGCGTTCGTATGTATTGGGGCAGGCCTATGAATTATTGGATAGAGTTA
GACGGGTGGAGAGGGTGGATTGAATTCCCGGCCATCACTTCCCACCCCTC
ATAGTCACATTGTTGGCTGTGTACCTAGCTTCATTGGTGTCGCTTGGCCG
GCCGGCCGACCAGAGCAATGCCGATCGGCGCAAGGGCAATATCGATGCTC
AACATGCTTCCAATGGTGTCTGTTCCCCGCGTAGCTGCTGCTACGAGCTC
CGCGGCCCTCCGAGTGACGGCCTTCTTCTTTCTCCGCTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000703-T1.utr3p1 | KJC3_000703-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000703-T1.utr5p1 | KJC3_000703-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018946 |
| DBxref | InterPro:IPR038607 |
| DBxref | PFAM:PF09423 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1605791..1608164 - |
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