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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1610170..1613320+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000705-T1 ID=KJC3_000705-T1|Name=KJC3_000705-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3151bp|location=Sequence derived from alignment at ch1:1610170..1613320+ (Aspergillus niger KJC3)
CCTCCATCCATCTTCCACACTTTCTTCCATTCAGACAGAGCAATTAACTA
GTTAAGTGACGCGCATTTTCCCTCTGAATTGCCTATCCTTATCGGCTCAT
TTATCCACCCCCTAATCTCCGAAGAATCGACGATGTGCCTGATTGGGACG
TGAAGTTGTGACCGATCTTATCGCATATGTTATCTTGATCAATAAACAAT
CCCAATCGTTTCCGCCATCATGGACACGACTTCCCATGATACCGTCGGCG
CGTCCACGCTGGCCACCCCCCTCTTCATGCCTTCGTCACCGCCATCTCAT
CCTGATCAAGGAGAGAGCTATTCTCCGGTCAGCACCAGAAGCTTCCGCTA
TAGTTCGCGCGGCGCGACCGGCGCAGACCTCGACGACGCGCGTTCGCCGC
AACGCCGCTCCCCCAAATCCTCCAGAGCGTCCTCGCTCGAGCGCGCCGCG
AACGAGATCGATGCCCGTCTGGCGCAGTACACAGTCGACTTCAGTCAGTT
TCCGAGTAACCACGCGCTGGATGAGGGGCCCCTGGAGGATCTGAGACTGC
CACATGAGGACAACTTGTCCGATGTTGGTGGACCAGATGACTTTACTGCC
AATTTGGAGAAGTACCTCATGGGGGAGGATGATACCATGGATCATAAGCA
TTTTAGTATAGACAACATGGAGCGCGACTTGTTCGAGCCAGAGCCCCATT
CCGATGCCGAGCACGAGTCAGAACCCGAGCCGGAACTGCAGGACGAGCTT
CCCCAGCCTCAATCCCAGCCACAGATTCAAAGACAAGAAGTGAAACAACC
ACAGCAGCAGGAAGATTCCCAGAACAACTCTCAAATGCACCAACCAGCTG
TTGAGGATGAGCCGGAGCTCGGCGAATACAGTGAATTTGGACCGCCTGTC
GACATGTCTACCCCGTCGCATCTGCTGCGTCGGGCCGGCGGACTCGGGAA
AGATATAACCCATCTTGAGAATATTGAAGAAGACCCGGATGACGAGATAG
AAGCGACTACGACTACACCCTCCGTTCGTAAGCACAAGCGCACATCTAGT
AAGAACGAGAAGGACGTGACCGAGGATCTGCGCCGGCAGATTGCGGAGCT
CAAGGATGCGCTGCGCGAACGCGATGAACAACTTGAAAGGAACCACAGGC
GTGTCTTGGAGGCGGCTTCTGCGGGAGAGCAAATCAAGCACCTACAAGGG
GAGCTGCAGAGAAAGTCGGAGCTGCTCGAGGAACTTTACGCTAAACGCAG
TGACGAGACACTCCTGCGTGAGCAAATCCAGCTGCTACAGAAACAAAATC
AGGAGAAAGAGTCCTTCCTCCAGAAGTCTACCATGAACGCGTCCGAGCTG
GGTACTCTTCAAAAGCAGATGAGCGACATGCAGAAGGAGCTGCAGAATCG
AGGCTCACACTCCGATATTGACACAGAGCGACTAGAAACAATCGCCTATC
TGCGTCAGCAAGTGGACTTGGCTCAGGAGCAATTGCGAAAGCGCGATGCG
ACCTTGGACGAGACAATGGCCAAGCTGAAGGAGGTCACGACCGCCAAGGA
GCAGCAACTTCGGGAGAAGAATAGCGAAATCGATGGCCTCAAAGCCCAGG
TCAGTGACCATCTGCTAGAGGTCGAGAAGCTGGAGGGGGAGCTTGACCGT
GCCAACCAGGCATACGAGACTCTCGAGGAAAGAATCGCCTCTCTGGAAAC
CAAGAACCGCCCATTAGAAGAGAAGAACAGCACGCTGGAAGCCGACTTGA
CCCGCGCGCAATCGCAAGTCACTGCGCAAGAAAATGCCCTCAAGGCCATG
GCAGCGGATCTCCCGCTCGAGACGGGCAACACCTACACTGAGATCCTTGA
ATTGATCAAAGACCTCGGCCAGCCCAGCATCCGACGCACGCCAGACCCCT
TCGCCAAGGACAAAGTTTCTCAGGACCAAGATACATCCCAAGACTTCGAA
CTCAAACACTTTCATGAAGAATTATTAAAGCTCCAAACCGAACTAGCCGA
AGCTACCTCGGCGAAAACAACCCTCGAGCTACAACTGACCCGCTCGCAAG
ACCAAGCCACAGAAGCACAAACCCTCATCCACTCCATTGAAACCGAAAAC
ACGCGCCTAACCAAACGCGCCGACGAGCTCAAATCCTCCCTCGACAGAGC
CCAACAAGAGCTATCCCAAGCCAACGAAGAACGCACGCGTGCTCTGGAAA
CCATCACTCGTCTCAAGAAGGAACAAGAGGACATCCAAAAGGCCGCCCAA
CAGCAGCAACCCAGCCCACCTCCATCCCCTCCAACAAACACCCACCACCA
ACACCAATCTACATCCACATCCACAACCCAGATTCAGACTCTTGAGAGCG
AACTCACCACCCTCCGCGCCACCAACACCAACCTCCAAACCCTCCTCAAC
AGCAGCTCCAACCGTGAAACCAAGCTAAAAGCCCACATCCTCACCCTCCG
CGACCGGCATCAAACGGAACTCCGCGCGCAGAAAACCAAAATCGAGCACC
TTGAATCCATCATCGCCACGAAGGACGAAACCGCCGCTGCAGTCGACGAA
CGCATCGCGCGGTCCGTCGAGAAGCGCGAAAAGGAGTGGCAGCGGCGCGT
GGATCTCCTACTGAAGGAGCGTGAGAGGATGAGTCGTGCTTTGATGTGGT
CGTGGGGTGAGAAGGAGATGGGCAGTATCAAGGAGAGGGACAATAAGGAG
AATGCAAATGTAGATGAGAAGGGGAGAAAGAGGCAGGCGTATCGGTATAA
GTTTGCCAATGGGGTGGATGGGGAGATGAAGTCGAAGTCGCAGTCTCGAT
CGGGGTCGAAGAGGGCTTGAGCAGTTTGAGGACTATGGTTCTGGTGCTGA
TCGCCCTTGCGCGTATCCGTTTGTATGTTTGTCTGTCTGTCTGTCTGTTC
GTTTGGCCTACCTACTTGAGAATTACGTGGGATTGCGGCATAACTATTTA
GGACTGGGGTCTCTTATGGTGTCTCGGGTATATACATTTAACAAATGGTT
GGCTGGGGGGCTGGTGTTGTCCTGTGCTGTATAGGGGGTATGGCTCTAGT
TCTTGTCCTGTGGCGTTTGGGTTTGTTTTTATGGTTGGTGTCGAGACGTA
CATTAGACGGTAGTTAATTTGACCCTACTTATCTGTTCAACTAAGCCAAG
C back to topCoding sequence (CDS) from alignment at ch1:1610170..1613320+ >KJC3_000705-T1 ID=KJC3_000705-T1|Name=KJC3_000705-T1|organism=Aspergillus niger KJC3|type=CDS|length=2601bp|location=Sequence derived from alignment at ch1:1610170..1613320+ (Aspergillus niger KJC3)
ATGGACACGACTTCCCATGATACCGTCGGCGCGTCCACGCTGGCCACCCC
CCTCTTCATGCCTTCGTCACCGCCATCTCATCCTGATCAAGGAGAGAGCT
ATTCTCCGGTCAGCACCAGAAGCTTCCGCTATAGTTCGCGCGGCGCGACC
GGCGCAGACCTCGACGACGCGCGTTCGCCGCAACGCCGCTCCCCCAAATC
CTCCAGAGCGTCCTCGCTCGAGCGCGCCGCGAACGAGATCGATGCCCGTC
TGGCGCAGTACACAGTCGACTTCAGTCAGTTTCCGAGTAACCACGCGCTG
GATGAGGGGCCCCTGGAGGATCTGAGACTGCCACATGAGGACAACTTGTC
CGATGTTGGTGGACCAGATGACTTTACTGCCAATTTGGAGAAGTACCTCA
TGGGGGAGGATGATACCATGGATCATAAGCATTTTAGTATAGACAACATG
GAGCGCGACTTGTTCGAGCCAGAGCCCCATTCCGATGCCGAGCACGAGTC
AGAACCCGAGCCGGAACTGCAGGACGAGCTTCCCCAGCCTCAATCCCAGC
CACAGATTCAAAGACAAGAAGTGAAACAACCACAGCAGCAGGAAGATTCC
CAGAACAACTCTCAAATGCACCAACCAGCTGTTGAGGATGAGCCGGAGCT
CGGCGAATACAGTGAATTTGGACCGCCTGTCGACATGTCTACCCCGTCGC
ATCTGCTGCGTCGGGCCGGCGGACTCGGGAAAGATATAACCCATCTTGAG
AATATTGAAGAAGACCCGGATGACGAGATAGAAGCGACTACGACTACACC
CTCCGTTCGTAAGCACAAGCGCACATCTAGTAAGAACGAGAAGGACGTGA
CCGAGGATCTGCGCCGGCAGATTGCGGAGCTCAAGGATGCGCTGCGCGAA
CGCGATGAACAACTTGAAAGGAACCACAGGCGTGTCTTGGAGGCGGCTTC
TGCGGGAGAGCAAATCAAGCACCTACAAGGGGAGCTGCAGAGAAAGTCGG
AGCTGCTCGAGGAACTTTACGCTAAACGCAGTGACGAGACACTCCTGCGT
GAGCAAATCCAGCTGCTACAGAAACAAAATCAGGAGAAAGAGTCCTTCCT
CCAGAAGTCTACCATGAACGCGTCCGAGCTGGGTACTCTTCAAAAGCAGA
TGAGCGACATGCAGAAGGAGCTGCAGAATCGAGGCTCACACTCCGATATT
GACACAGAGCGACTAGAAACAATCGCCTATCTGCGTCAGCAAGTGGACTT
GGCTCAGGAGCAATTGCGAAAGCGCGATGCGACCTTGGACGAGACAATGG
CCAAGCTGAAGGAGGTCACGACCGCCAAGGAGCAGCAACTTCGGGAGAAG
AATAGCGAAATCGATGGCCTCAAAGCCCAGGTCAGTGACCATCTGCTAGA
GGTCGAGAAGCTGGAGGGGGAGCTTGACCGTGCCAACCAGGCATACGAGA
CTCTCGAGGAAAGAATCGCCTCTCTGGAAACCAAGAACCGCCCATTAGAA
GAGAAGAACAGCACGCTGGAAGCCGACTTGACCCGCGCGCAATCGCAAGT
CACTGCGCAAGAAAATGCCCTCAAGGCCATGGCAGCGGATCTCCCGCTCG
AGACGGGCAACACCTACACTGAGATCCTTGAATTGATCAAAGACCTCGGC
CAGCCCAGCATCCGACGCACGCCAGACCCCTTCGCCAAGGACAAAGTTTC
TCAGGACCAAGATACATCCCAAGACTTCGAACTCAAACACTTTCATGAAG
AATTATTAAAGCTCCAAACCGAACTAGCCGAAGCTACCTCGGCGAAAACA
ACCCTCGAGCTACAACTGACCCGCTCGCAAGACCAAGCCACAGAAGCACA
AACCCTCATCCACTCCATTGAAACCGAAAACACGCGCCTAACCAAACGCG
CCGACGAGCTCAAATCCTCCCTCGACAGAGCCCAACAAGAGCTATCCCAA
GCCAACGAAGAACGCACGCGTGCTCTGGAAACCATCACTCGTCTCAAGAA
GGAACAAGAGGACATCCAAAAGGCCGCCCAACAGCAGCAACCCAGCCCAC
CTCCATCCCCTCCAACAAACACCCACCACCAACACCAATCTACATCCACA
TCCACAACCCAGATTCAGACTCTTGAGAGCGAACTCACCACCCTCCGCGC
CACCAACACCAACCTCCAAACCCTCCTCAACAGCAGCTCCAACCGTGAAA
CCAAGCTAAAAGCCCACATCCTCACCCTCCGCGACCGGCATCAAACGGAA
CTCCGCGCGCAGAAAACCAAAATCGAGCACCTTGAATCCATCATCGCCAC
GAAGGACGAAACCGCCGCTGCAGTCGACGAACGCATCGCGCGGTCCGTCG
AGAAGCGCGAAAAGGAGTGGCAGCGGCGCGTGGATCTCCTACTGAAGGAG
CGTGAGAGGATGAGTCGTGCTTTGATGTGGTCGTGGGGTGAGAAGGAGAT
GGGCAGTATCAAGGAGAGGGACAATAAGGAGAATGCAAATGTAGATGAGA
AGGGGAGAAAGAGGCAGGCGTATCGGTATAAGTTTGCCAATGGGGTGGAT
GGGGAGATGAAGTCGAAGTCGCAGTCTCGATCGGGGTCGAAGAGGGCTTG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000705-T1.utr5p1 | KJC3_000705-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000705-T1.utr3p1 | KJC3_000705-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1610170..1613320 + |
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