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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1613379..1616180- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000706-T1 ID=KJC3_000706-T1|Name=KJC3_000706-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2802bp|location=Sequence derived from alignment at ch1:1613379..1616180- (Aspergillus niger KJC3)
GGCCTTATCTGCAGCCCTGGATTCTGCATCGCATCCTGCATTCTACTTGA
CCGCTCTGTCTCACTACGTGCGCCCACTTTAGCTTTGACAACCCGCGTTT
TCCACGCGATGATGACGCTGAAATGCAATCGCGGCTTTTCTGAAGGAGTA
AACCCGCCTACTACTCTCACATACAGGGCTAACTATCAATCCCTAACTGG
AAATAATTTGCAATTGAATCTCGAGGATATGCATACGACCTCCGATGACT
AACACTTACCAGGAGAATAGGGGCAAACTATTGGGATTGCGAAGGTCCAA
TGGCCGTGGATGCAAATTTAGTCTGCATTCCTCAAGGACAGCTCCCCATA
TCAGGCAGTGACAACAAACATCACAGACCCTATTCCTACCAATTCCCTTT
TCTGTTAGTGGGCATGCCTCGGAATCGCCCATTCCAACCCCTCGGTCCTC
CGCGTTCACGCGCGAGGCCATTCTCCCAGCATATACATCCTTTTAGTCGG
CCTTGGCCCATTGTTTTGCTTCTCTTCCATTGTTTCCCCCGTCACGTTCA
CCACCCACATGTTCTTTATGGGCTGCACCTACTGTTCTTTCCGATACATC
AGTTTCTATCATCTCTAACCTCTCAAACCACTGGATGCTTGGCGAGTCTT
GTTAACAGAAGCCGTAGCGCAGCTGGTTCCAGCTACTCTCGACGCGGTCC
ATCATGTTCAACCGTTCAATAGCCTCCCCAAAAGGAGGCGTTTGGACCAA
AGTAGTGATATTCATCTCGTTATATGTCATGCTCTTCGACTCGTTCATTG
AATGGGCCATCGTGCTGTACCTGTATGGGATCCGCCGTGTGGACTCAAAG
ATGACCCCGAGCTTGGTCCTGGCTCTTGTTGCGGTAAGCCTCTGCCTTGA
CTTGGCCGGCTGGTAAAGACACTGACGGATACTAGTCATTCTTCACTGTT
CCTCTTGTCGCTCTCCACAGCCTCCTTGCCTGGCAATACAACAAGGTTGT
AGGGTTCGCGAGTCAGAAAGCTTTGCTGAATGCCGCTTGTACCTACATCC
TCCGACTTACGATACTCATTTGGATCGCTGCCAGTGCCGCAGGATTGGTG
TTGGTTTCGCAGCAGATGTACTGCCTGGCTGATGACGGTGGTGGTGACTT
CTGGAAGATCGGTATTAGTTGCGCGCTTCAAAGGGCTTCTGTCATTGTTT
CGATTATATCATTGTAGGTCTGCTGGCCAAAGTTTCCGATATGTTTACTG
ACTCGCGACAGCGTGACCGTGTGTCTTTTCTTCTGCTCAAGAGAACTTTG
CGAGCGTCCGTACGACATATCTCTTCTCGGTGTATACAAGCCACAATTAT
CGTCATACGATGACAAAATGTCTGCCAGCTCAACTATGGGAAGCCACGTC
AGTCTGGAAAATGACATCTATCACGTTTGCCGCCGGCCTGATGTGACATT
TGGGCGCGACCTGTACCTGTCATCAAGCAGCAACTCCATATGTAAAGCTG
GTAGTATTGAACACCCTGCATCCGTATATGAGAAACCCCAGTTAAAGCTC
GACACAAAATGTGAAGCAGAGACCTCAGGGATATACTCTGGAACTACGCT
CTCGGTTGATGGCACGCCATCCAAAAATTCTTCCAGGGATGGAACAAACT
CCGATGTCAGTTCGAATGCCTCAACTACACCCCCCAAAGCCACGTTAAGG
GCTCCTTTCGACTCTTATCGCCCGGCTGTACTGGCAGAACTACCGGGATC
TCCGCAAATCAAAAATCAAAGGCACCAGGCCTCTGGATCCCCGTTCTTCC
GACTCCTTCCTAAGGTTTTCGCAAGTCAGATCTCGTTGTCATCGGACCCT
GACATCCTTGCTCTCGCTGGTCCTGATTCTGGTACGGATGTTGAGCAACC
AGCAGAGGAGAAGTCAACAGAGATAATCGAGCCACCGCCAACTCCCAAAA
GGGAATATGCCCCTGGACACCCGCTCGCATCTTCCCCTGTGGAGCTTCCA
TTCCCAACCTCTCCTCCAGTGGAGAGGTCTATGTTTGCCATGACGAACAG
TAACCCTGAGCTTAAGTCGAGTCGGTCCGAAGGAAGCACGCTTCCACGAT
CAATATCAAGCAGCTCCGCTGATGCCCCCGAAGTTGTCGCGCCAGAGCCA
CTTAGAATTCAGAGATCCAACACTTCACACACAGCTCCAATTACTAGCCA
GTACAACTTCTCTCGGCCAAAACCTCCGGCTGTACCTCCGATCCCGCCAC
GACAGCCAAATCACAGCTACCAAGGCTCTCTATTGCAGCACGGACGATCC
AGACGCCAAAACTCGATTCGTTCGAGCGGACGACGAAGCCAAGTCTACCG
TTTTGAAGCATGCCAGATACCGCGGCACACACAAAGCCAATATCATCCCC
AGCAAAGCCGCTACACTCGTCGATCGTACTTTGATACCCACCGTCGAATG
CCCTCACGGCGGCGTCGAAATGACGTCGAAATCGTGTACTCTAGCACCCG
GCGCCCTCGCAGCAACACCTGTGGAGGATTCGGCACAACATCCAGTCTAG
ACTGTATCCGCGAGTCTGGGGCCTCCGTTGATGAACCGGAAGATATTTTT
GCGGATGGAAACACGTATAGAGGCACTACTCGAACTGCTAGTGCCCACGG
CATGTACGCATTTTGAGTGAAGTCTGCGGGTCGGACTGGCTATGATCGAA
TCTGTTCCATTATCACGTTCTTATTGGCTCATGATTGATATTAACTGTAT
ACTAGCACGCTTCTTTTCCTTTGTTTACCTTTCTTGCCATATACTATTGG
AT back to topCoding sequence (CDS) from alignment at ch1:1613379..1616180- >KJC3_000706-T1 ID=KJC3_000706-T1|Name=KJC3_000706-T1|organism=Aspergillus niger KJC3|type=CDS|length=5589bp|location=Sequence derived from alignment at ch1:1613379..1616180- (Aspergillus niger KJC3)
CGTGACCGTGTGTCTTTTCTTCTGCTCAAGAGAACTTTGCGAGCGTCCGT
ACGACATATCTCTTCTCGGTGTATACAAGCCACAATTATCGTCATACGAT
GACAAAATGTCTGCCAGCTCAACTATGGGAAGCCACGTCAGTCTGGAAAA
TGACATCTATCACGTTTGCCGCCGGCCTGATGTGACATTTGGGCGCGACC
TGTACCTGTCATCAAGCAGCAACTCCATATGTAAAGCTGGTAGTATTGAA
CACCCTGCATCCGTATATGAGAAACCCCAGTTAAAGCTCGACACAAAATG
TGAAGCAGAGACCTCAGGGATATACTCTGGAACTACGCTCTCGGTTGATG
GCACGCCATCCAAAAATTCTTCCAGGGATGGAACAAACTCCGATGTCAGT
TCGAATGCCTCAACTACACCCCCCAAAGCCACGTTAAGGGCTCCTTTCGA
CTCTTATCGCCCGGCTGTACTGGCAGAACTACCGGGATCTCCGCAAATCA
AAAATCAAAGGCACCAGGCCTCTGGATCCCCGTTCTTCCGACTCCTTCCT
AAGGTTTTCGCAAGTCAGATCTCGTTGTCATCGGACCCTGACATCCTTGC
TCTCGCTGGTCCTGATTCTGGTACGGATGTTGAGCAACCAGCAGAGGAGA
AGTCAACAGAGATAATCGAGCCACCGCCAACTCCCAAAAGGGAATATGCC
CCTGGACACCCGCTCGCATCTTCCCCTGTGGAGCTTCCATTCCCAACCTC
TCCTCCAGTGGAGAGGTCTATGTTTGCCATGACGAACAGTAACCCTGAGC
TTAAGTCGAGTCGGTCCGAAGGAAGCACGCTTCCACGATCAATATCAAGC
AGCTCCGCTGATGCCCCCGAAGTTGTCGCGCCAGAGCCACTTAGAATTCA
GAGATCCAACACTTCACACACAGCTCCAATTACTAGCCAGTACAACTTCT
CTCGGCCAAAACCTCCGGCTGTACCTCCGATCCCGCCACGACAGCCAAAT
CACAGCTACCAAGGCTCTCTATTGCAGCACGGACGATCCAGACGCCAAAA
CTCGATTCGTTCGAGCGGACGACGAAGCCAAGTCTACCGTTTTGAAGCAT
GCCAGATACCGCGGCACACACAAAGCCAATATCATCCCCAGCAAAGCCGC
TACACTCGTCGATCGTACTTTGATACCCACCGTCGAATGCCCTCACGGCG
GCGTCGAAATGACGTCGAAATCGTGTACTCTAGCACCCGGCGCCCTCGCA
GCAACACCTGTGGAGGATTCGGCACAACATCCAGTCTAGACTGTATCCGC
GAGTCTGGGGCCTCCGTTGATGAACCGGAAGATATTTTTGCGGATGGAAA
CACGTATAGAGGCACTACTCGAACTGCTAGTGCCCACGGCATGTACGCAT
TTTGATCATTCTTCACTGTTCCTCTTGTCGCTCTCCACAGCCTCCTTGCC
TGGCAATACAACAAGGTTGTAGGGTTCGCGAGTCAGAAAGCTTTGCTGAA
TGCCGCTTGTACCTACATCCTCCGACTTACGATACTCATTTGGATCGCTG
CCAGTGCCGCAGGATTGGTGTTGGTTTCGCAGCAGATGTACTGCCTGGCT
GATGACGGTGGTGGTGACTTCTGGAAGATCGGTATTAGTTGCGCGCTTCA
AAGGGCTTCTGTCATTGTTTCGATTATATCATTATGTTCAACCGTTCAAT
AGCCTCCCCAAAAGGAGGCGTTTGGACCAAAGTAGTGATATTCATCTCGT
TATATGTCATGCTCTTCGACTCGTTCATTGAATGGGCCATCGTGCTGTAC
CTGTATGGGATCCGCCGTGTGGACTCAAAGATGACCCCGAGCTTGGTCCT
GGCTCTTGTTGCGCGTGACCGTGTGTCTTTTCTTCTGCTCAAGAGAACTT
TGCGAGCGTCCGTACGACATATCTCTTCTCGGTGTATACAAGCCACAATT
ATCGTCATACGATGACAAAATGTCTGCCAGCTCAACTATGGGAAGCCACG
TCAGTCTGGAAAATGACATCTATCACGTTTGCCGCCGGCCTGATGTGACA
TTTGGGCGCGACCTGTACCTGTCATCAAGCAGCAACTCCATATGTAAAGC
TGGTAGTATTGAACACCCTGCATCCGTATATGAGAAACCCCAGTTAAAGC
TCGACACAAAATGTGAAGCAGAGACCTCAGGGATATACTCTGGAACTACG
CTCTCGGTTGATGGCACGCCATCCAAAAATTCTTCCAGGGATGGAACAAA
CTCCGATGTCAGTTCGAATGCCTCAACTACACCCCCCAAAGCCACGTTAA
GGGCTCCTTTCGACTCTTATCGCCCGGCTGTACTGGCAGAACTACCGGGA
TCTCCGCAAATCAAAAATCAAAGGCACCAGGCCTCTGGATCCCCGTTCTT
CCGACTCCTTCCTAAGGTTTTCGCAAGTCAGATCTCGTTGTCATCGGACC
CTGACATCCTTGCTCTCGCTGGTCCTGATTCTGGTACGGATGTTGAGCAA
CCAGCAGAGGAGAAGTCAACAGAGATAATCGAGCCACCGCCAACTCCCAA
AAGGGAATATGCCCCTGGACACCCGCTCGCATCTTCCCCTGTGGAGCTTC
CATTCCCAACCTCTCCTCCAGTGGAGAGGTCTATGTTTGCCATGACGAAC
AGTAACCCTGAGCTTAAGTCGAGTCGGTCCGAAGGAAGCACGCTTCCACG
ATCAATATCAAGCAGCTCCGCTGATGCCCCCGAAGTTGTCGCGCCAGAGC
CACTTAGAATTCAGAGATCCAACACTTCACACACAGCTCCAATTACTAGC
CAGTACAACTTCTCTCGGCCAAAACCTCCGGCTGTACCTCCGATCCCGCC
ACGACAGCCAAATCACAGCTACCAAGGCTCTCTATTGCAGCACGGACGAT
CCAGACGCCAAAACTCGATTCGTTCGAGCGGACGACGAAGCCAAGTCTAC
CGTTTTGAAGCATGCCAGATACCGCGGCACACACAAAGCCAATATCATCC
CCAGCAAAGCCGCTACACTCGTCGATCGTACTTTGATACCCACCGTCGAA
TGCCCTCACGGCGGCGTCGAAATGACGTCGAAATCGTGTACTCTAGCACC
CGGCGCCCTCGCAGCAACACCTGTGGAGGATTCGGCACAACATCCAGTCT
AGACTGTATCCGCGAGTCTGGGGCCTCCGTTGATGAACCGGAAGATATTT
TTGCGGATGGAAACACGTATAGAGGCACTACTCGAACTGCTAGTGCCCAC
GGCATGTACGCATTTTGATCATTCTTCACTGTTCCTCTTGTCGCTCTCCA
CAGCCTCCTTGCCTGGCAATACAACAAGGTTGTAGGGTTCGCGAGTCAGA
AAGCTTTGCTGAATGCCGCTTGTACCTACATCCTCCGACTTACGATACTC
ATTTGGATCGCTGCCAGTGCCGCAGGATTGGTGTTGGTTTCGCAGCAGAT
GTACTGCCTGGCTGATGACGGTGGTGGTGACTTCTGGAAGATCGGTATTA
GTTGCGCGCTTCAAAGGGCTTCTGTCATTGTTTCGATTATATCATTATGT
TCAACCGTTCAATAGCCTCCCCAAAAGGAGGCGTTTGGACCAAAGTAGTG
ATATTCATCTCGTTATATGTCATGCTCTTCGACTCGTTCATTGAATGGGC
CATCGTGCTGTACCTGTATGGGATCCGCCGTGTGGACTCAAAGATGACCC
CGAGCTTGGTCCTGGCTCTTGTTGCGCGTGACCGTGTGTCTTTTCTTCTG
CTCAAGAGAACTTTGCGAGCGTCCGTACGACATATCTCTTCTCGGTGTAT
ACAAGCCACAATTATCGTCATACGATGACAAAATGTCTGCCAGCTCAACT
ATGGGAAGCCACGTCAGTCTGGAAAATGACATCTATCACGTTTGCCGCCG
GCCTGATGTGACATTTGGGCGCGACCTGTACCTGTCATCAAGCAGCAACT
CCATATGTAAAGCTGGTAGTATTGAACACCCTGCATCCGTATATGAGAAA
CCCCAGTTAAAGCTCGACACAAAATGTGAAGCAGAGACCTCAGGGATATA
CTCTGGAACTACGCTCTCGGTTGATGGCACGCCATCCAAAAATTCTTCCA
GGGATGGAACAAACTCCGATGTCAGTTCGAATGCCTCAACTACACCCCCC
AAAGCCACGTTAAGGGCTCCTTTCGACTCTTATCGCCCGGCTGTACTGGC
AGAACTACCGGGATCTCCGCAAATCAAAAATCAAAGGCACCAGGCCTCTG
GATCCCCGTTCTTCCGACTCCTTCCTAAGGTTTTCGCAAGTCAGATCTCG
TTGTCATCGGACCCTGACATCCTTGCTCTCGCTGGTCCTGATTCTGGTAC
GGATGTTGAGCAACCAGCAGAGGAGAAGTCAACAGAGATAATCGAGCCAC
CGCCAACTCCCAAAAGGGAATATGCCCCTGGACACCCGCTCGCATCTTCC
CCTGTGGAGCTTCCATTCCCAACCTCTCCTCCAGTGGAGAGGTCTATGTT
TGCCATGACGAACAGTAACCCTGAGCTTAAGTCGAGTCGGTCCGAAGGAA
GCACGCTTCCACGATCAATATCAAGCAGCTCCGCTGATGCCCCCGAAGTT
GTCGCGCCAGAGCCACTTAGAATTCAGAGATCCAACACTTCACACACAGC
TCCAATTACTAGCCAGTACAACTTCTCTCGGCCAAAACCTCCGGCTGTAC
CTCCGATCCCGCCACGACAGCCAAATCACAGCTACCAAGGCTCTCTATTG
CAGCACGGACGATCCAGACGCCAAAACTCGATTCGTTCGAGCGGACGACG
AAGCCAAGTCTACCGTTTTGAAGCATGCCAGATACCGCGGCACACACAAA
GCCAATATCATCCCCAGCAAAGCCGCTACACTCGTCGATCGTACTTTGAT
ACCCACCGTCGAATGCCCTCACGGCGGCGTCGAAATGACGTCGAAATCGT
GTACTCTAGCACCCGGCGCCCTCGCAGCAACACCTGTGGAGGATTCGGCA
CAACATCCAGTCTAGACTGTATCCGCGAGTCTGGGGCCTCCGTTGATGAA
CCGGAAGATATTTTTGCGGATGGAAACACGTATAGAGGCACTACTCGAAC
TGCTAGTGCCCACGGCATGTACGCATTTTGATCATTCTTCACTGTTCCTC
TTGTCGCTCTCCACAGCCTCCTTGCCTGGCAATACAACAAGGTTGTAGGG
TTCGCGAGTCAGAAAGCTTTGCTGAATGCCGCTTGTACCTACATCCTCCG
ACTTACGATACTCATTTGGATCGCTGCCAGTGCCGCAGGATTGGTGTTGG
TTTCGCAGCAGATGTACTGCCTGGCTGATGACGGTGGTGGTGACTTCTGG
AAGATCGGTATTAGTTGCGCGCTTCAAAGGGCTTCTGTCATTGTTTCGAT
TATATCATTATGTTCAACCGTTCAATAGCCTCCCCAAAAGGAGGCGTTTG
GACCAAAGTAGTGATATTCATCTCGTTATATGTCATGCTCTTCGACTCGT
TCATTGAATGGGCCATCGTGCTGTACCTGTATGGGATCCGCCGTGTGGAC
TCAAAGATGACCCCGAGCTTGGTCCTGGCTCTTGTTGCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000706-T1.utr3p1 | KJC3_000706-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000706-T1.utr5p1 | KJC3_000706-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1613379..1616180 - |
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