|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1618104..1618950+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000707-T1 ID=KJC3_000707-T1|Name=KJC3_000707-T1|organism=Aspergillus niger KJC3|type=mRNA|length=847bp|location=Sequence derived from alignment at ch1:1618104..1618950+ (Aspergillus niger KJC3)
AACGGGTCTTAACCGAATTGCATATTCAGAATGCGTGATGCTCCAAAATT
GGGCCCGATCAATGACTGCGCCTTGTACAGGATTTTGACCCTTTTCGCGA
TTGCGGCTCTAAGGAGGTTTCGTCCGTTTAAGGGAAGCGTTCTTATGTTG
ACAGATCGAATTTGTGTCAAATACGGACAACATGTAGACTTATCAGAGGC
AGGTACTATGTGTTTCATCTCACAGAACACATCTATACCGGTTCCAAAAG
TCCTGTGCGCCTTTACGCACCAGCGTTGCACCTACATTGTGATGGAAAGA
ATCAAAGGGGAAATGATTGGTGCCGGCTGGGTTTATCGGAGTGAGGAGTC
GAAGGCAAAGGTTCTTACTCAGTTGCAGAAGATGGTCCAGGAGATGCGAA
CACTCCCACCTCCAGCAGGCATGGGTGTGGGCTCCGTTGTGGACGGGACT
CTCTTTGATGGCCGCCTGCCGGGCACTTCCCTACGCTTTGGGCCTTTTCC
CAGTGTCCAAGAATTCCACCGACATTTGCGAGGTGGCATGGACTTTGACC
CGGGACTTGATCCCGCCATACAGGAACTGATCAGACAACATGATAGATCT
TTCCCGATTAAATTTACCCATGGCGATCTTAGTAGCCTCAACATTCTGGC
CCGCGGGGACACTATTGTTGGAATTATTGACTGGGAAACTGCCGGCTGGT
ATCCATCATACTGGGAATATACTACAGCTTGCCCAAGTCAACCCCCAAAA
CTCCTTTTGGATCAATGAAATCGATAAATTCATCACCCCTATGCCGGACG
AACTGGCAATGGAACGAATTCGCCAAAAGTTTTTCGGGGATTATTGA back to topCoding sequence (CDS) from alignment at ch1:1618104..1618950+ >KJC3_000707-T1 ID=KJC3_000707-T1|Name=KJC3_000707-T1|organism=Aspergillus niger KJC3|type=CDS|length=1512bp|location=Sequence derived from alignment at ch1:1618104..1618950+ (Aspergillus niger KJC3)
ATGCGTGATGCTCCAAAATTGGGCCCGATCAATGACTGCGCCTTGTACAG
GATTTTGACCCTTTTCGCGATTGCGGCTCTAAGGAGGTTTCGTCCGTTTA
AGGGAAGCGTTCTTATGTTGACAGATCGAATTTGTGTCAAATACGGACAA
CATGTAGACTTATCAGAGGCAGGTACTATGTGTTTCATCTCACAGAACAC
ATCTATACCGGTTCCAAAAGTCCTGTGCGCCTTTACGCACCAGCGTTGCA
CCTACATTGTGATGGAAAGAATCAAAGGGGAAATGATTGGTGCCGGCTGG
GTTTATCGGAGTGAGGAGTCGAAGGCAAAGGTTCTTACTCAGTTGCAGAA
GATGGTCCAGGAGATGCGAACACTCCCACCTCCAGCAGGCATGGGTGTGG
GCTCCGTTGTGGACGGGACTCTCTTTGATGGCCGCCTGCCGGGCACTTCC
CTACGCTTTGGGCCTTTTCCCAGTGTCCAAGAATTCCACCGACATTTGCG
AGGTGGCATGGACTTTGACCCGGGACTTGATCCCGCCATACAGGAACTGA
TCAGACAACATGATAGATCTTTCCCGATTAAATTTACCCATGGCGATCTT
AGTAGCCTCAACATTCTGGCCCGCGGGGACACTATTCTTGCCCAAGTCAA
CCCCCAAAACTCCTTTTGGATCAATGAAATCGATAAATTCATCACCCCTA
TGCCGGACGAACTGGCAATGGAACGAATTCGCCAAAAGTTTTTCGGGGAT
TATTGAATGCGTGATGCTCCAAAATTGGGCCCGATCAATGACTGCGCCTT
GTACAGGATTTTGACCCTTTTCGCGATTGCGGCTCTAAGGAGGTTTCGTC
CGTTTAAGGGAAGCGTTCTTATGTTGACAGATCGAATTTGTGTCAAATAC
GGACAACATGTAGACTTATCAGAGGCAGGTACTATGTGTTTCATCTCACA
GAACACATCTATACCGGTTCCAAAAGTCCTGTGCGCCTTTACGCACCAGC
GTTGCACCTACATTGTGATGGAAAGAATCAAAGGGGAAATGATTGGTGCC
GGCTGGGTTTATCGGAGTGAGGAGTCGAAGGCAAAGGTTCTTACTCAGTT
GCAGAAGATGGTCCAGGAGATGCGAACACTCCCACCTCCAGCAGGCATGG
GTGTGGGCTCCGTTGTGGACGGGACTCTCTTTGATGGCCGCCTGCCGGGC
ACTTCCCTACGCTTTGGGCCTTTTCCCAGTGTCCAAGAATTCCACCGACA
TTTGCGAGGTGGCATGGACTTTGACCCGGGACTTGATCCCGCCATACAGG
AACTGATCAGACAACATGATAGATCTTTCCCGATTAAATTTACCCATGGC
GATCTTAGTAGCCTCAACATTCTGGCCCGCGGGGACACTATTCTTGCCCA
AGTCAACCCCCAAAACTCCTTTTGGATCAATGAAATCGATAAATTCATCA
CCCCTATGCCGGACGAACTGGCAATGGAACGAATTCGCCAAAAGTTTTTC
GGGGATTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000707-T1.utr5p1 | KJC3_000707-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1618104..1618950 + |
|
