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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1636977..1640632+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000714-T1 ID=KJC3_000714-T1|Name=KJC3_000714-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3656bp|location=Sequence derived from alignment at ch1:1636977..1640632+ (Aspergillus niger KJC3)
CTGGCAGGCTCACCAGACGCCAAGATTCCCTCTCCCACGCCTGGAATCTC
CGCCTCGATTGTTGCCTGTCTGTCTTGTCTTGTCACTATTCACGCCCTAC
TCTAACTAGTTGACGACTCAGCCAGGCCAGAGACCCCCGTCATTGATCGC
CCTTCTGGAATACCCGGCTCCCCTCACACTCGTATTCCTCTCCGCTCATT
TTCCTCTCATGATTCTGAAACCTACCTGGCTGGTTAGCGGCCACTGATGT
GAGCTTAAACCAACCCTTGCAAGCTACCCAGCACGAGGTTGTGCGTATGC
GCGCGCGCTGGGATCTATTCACTCAAAAGTGATAAAGTTATGATGATAGA
CTGACTGAAGTTGTGAAGTGAGGAGTTTCAGGTGCCTTTTGATTATTATC
ATTGTACTCCTTTGTTTCACATCCTTCTTGATACCCACCTACATATACAG
CCTTACGATTCTCTGCTGGATGATTAGATTATCATTTCATTGTCCATTCA
GTCGTCAATAAGGTCATTCACCGTCTGTCAACCTTATCGCGGCCAATTTA
CACCATCCGGGAACGGAAAGTACCGCCATGTCGACGGATACCGCTACTGC
CACTAACCCTGCCCCTGTGTCTTCGCCACACTCGTCTGGTTCGTCCTTGT
CGTCCTTGTCATCTCCTCCGTCGGATACGAATACGTATCCTGCATCTATG
TCTATGTCTGTGTCGCCGGCGAGGAAACGCTCGATAGGGGATGTAGATGG
GCATATTGCTGCTGCGAAAGGGGGGGATGATACGAATGCGAATACCACTA
CGGAGATGAAGATTGATGGAGATACTCGTGCCGATACGGATGATAACAAG
GAGAATCAGGATACACAAGTGAAATTATGTGATCTTGGGGATGAGAAGAA
GACTTCGGTTGTTGGAGACTCGGCTGCCACTACGACTGCTGCTCCGGCTG
CGAAGAAGAGAAAGTTGTCGCCTGCCAGTAAAGAGGCGAAGCAGCAGGAG
AAGGAGGCGAGAGAGCGGCAGAAACTAGAGGAGAAGGCTAAGAAGGAGGA
AGAAAAGGCTAAGAGGGAAGAAGAGAAGGCTAAGAAAGAGGAAGAAAAGA
GGAAACGGGAGGCTGAGAAAGAGGAGGAGAAGCGGGTGAAAGAAGAGGAG
AAGCGAGCTAAGGAGGAGGAGAAGAAGAAGCGCGAAGCGGAAAAGGAAGA
GGAGCGCAAGAAGAAGGAAGAGAAACGGAAGGTTAAAGAGGAGGAAAAGG
CTGCTAAGGAGGAAGAGAAGCGGAAAAAAGAGGAGGAGAAGCTGAAGAAA
GAAAGAGTGAGTTGGAACTCATCCCGGGCTGAATTGCAAGTTTTGGGAAT
CTAACACGCAACAGGCGCAAACGAAGCTGAACTCCTTTTTCGCGAAACCG
AAAACCCCGGCACAACCATCATCATCGAACACGACTCTCTCACCTAGCAA
ACCGACTGGCGCTGGCGCTTCGAATGACCTTTCTCATGACTCTGGATCGA
CTGTATCTGACTACCAGCGCGAGTTTCCGGACTTCTTCCTCCAGTCACAT
ACCACACTTGCGCCACCGCACAGGTTCCAGCGCGACAACGAAGCTCTGCA
GCATACGCGGGAGAAAGTTGATGCCTACCTGAAAAGTGCCAAGGATGGCA
AGCATGAGCCTTTAATATTTCGTCCTTCCGAGCTCTTCCAGCTTATGCCA
TACCAGCGACGGCGTGGACGATTGCCCGCTTCGGTCAAACAGATCCTTTT
ACAGATGCAGAATCTTGCAGATCAGTCAGAGACCTCCGAAGCTGCCCAGA
GGGCTCGCGATCTTCTGAGGCAGGTGAGAATGAAATCGCTGAAATTCAGC
GAGGATGTCCGGCCTCCATACCAGGGAACCTATAGCAAGAGCCTGCCGGA
GTCATCCGTCCGCCGGTTGATGCGCAATCCTTTTCGTCGCGGGCTACCGG
AGACGAATTATGACTACGACTCGGAAGCTGAGTGGGAAGAGCCCGAGGAA
GGCGAGGACCTAGATTCAGAGGAAGAAGAGGAAGGGAGTGAAGATGGAGA
GGATGACATGGATGGCTTCCTGGATGATGAGGATGACCACCCGATTGACG
GCAAGAGACGTCACATCGTCGGGGATCTAGAACCCGTCAGCACTGGTATA
CGATGGCAGGAACATGGCGTGGACCCGGAGCTGCAGGCGTACAAAATGGA
GACCATTTCCGACTCGGTGACTTTCCCTATTGACCCGTTCTCCACTGCCT
ACTGGCAGAAACCGAAGGCGGCCGCGGAGCCAGCGCAGGCGGCTGGGCTG
GGGCGCTCGACACTGCACGCTTTCATGGGAGGACATACATCGTCGCCATC
ATCACACAAACCGACAGGGACTGGGCCGGGAGCGGACGGGGGCACCCTGG
CCGTTCTGACAGCGGGGAGGACAAAGCGAACGTTGCCGCCGGAGCAGCTG
GAAGAGTTCAAGCAGGTGGTGAATGGCAGTGATCTGACCAAGATGGGGCT
AATTGAAATCTTGAAGAAACGGTAAGACGTGGGCCCACAAGGGATGCTTG
TTGATCGGAAGGCTAATCATCAGGGTCGCGCCGCCATAGGTTCCCCAAGG
TGTCCAAGGACAGTCTGAAAGACACGCTGAACAGCGTGGCCACGCGGGTG
GGACAGAAAGAGGCTGACAAAAAATGGGTCTGCAACTAGCCGTGGCCGGG
GATTGGCAAGTTTGGCCCCCGGGAAGGACAACGCACAACCAAGGGACTGG
TTACGGTTGTGTTTTGAGGCACGGCGGTTAGAAGAAGAAGAAAATAATAA
TGAAAAGATCAGTCACAGACCGAGAGTGGTCTTGTCGGCCAATTGAGTGG
GTTGATTGGTTCCCCAACGGACGTGTATACCCCTCCTTTCTCTGCGTCTC
CAAGTGTCTCCTTTGCTTTCTTTCCTTTTTATTTTACGGTTTATCCTGTC
CCTCCTTGCCTAGTGTTTCATTTGTCGACTATACTCAACGTCTGGCCACC
CTGTCAACCAGACACACTGACTCGGGTGAGTGAGTGGATGGCTAGACTGG
TCGGGTAGTGTCGTTTGGCGAGGGGAGTTTGGGTTACGATAAAACGAAGA
AAGACAAAAAGAGAGAGGGAGGGAGGGAGAGAGCACCAGTGCCAGACAAG
GGACCTACGATGCATCTACATGGAAGTGTTTTCATCTCATCTCATCTCTC
ATCGCCTCCCATCACGTCAAGAGACGATGTTATTCGCCCCATACATCAAA
GAGGGGAAGGAGAAGGGGCTCCGTGTGGTTGTTAGAGATGATCGGAGGGG
TAGTAGCAAGTCAGAAAAGGGAACTGCACATACGGCAGGGATCGCCAATC
ACAAATGTTCCTGAGCAAACTGTCGAGCCAGGTGGAGCGGGGAATTATAG
AAACCAAAGACAGCGAGCGAAAAGAGAGAGGTGGGGGGGAAAGAAAAAGA
AAGTATCTTAATAATAGATCGGGGAAAACGCAGTGCAGTGCGGTGCCAAC
ACAACAACCACACAGCCTGCGGGAAAGCCTCATTGACATGACATGACATG
AACTGACCAGACCTGACCACTGGGATTGGCATTGGAACACTTCAGAACCC
GGGTAGATGCACCTCTCTCGGGGACCTACTTGCCTGCCTCCATGCATACG
TACATG back to topCoding sequence (CDS) from alignment at ch1:1636977..1640632+ >KJC3_000714-T1 ID=KJC3_000714-T1|Name=KJC3_000714-T1|organism=Aspergillus niger KJC3|type=CDS|length=5958bp|location=Sequence derived from alignment at ch1:1636977..1640632+ (Aspergillus niger KJC3)
ATGTCGACGGATACCGCTACTGCCACTAACCCTGCCCCTGTGTCTTCGCC
ACACTCGTCTGGTTCGTCCTTGTCGTCCTTGTCATCTCCTCCGTCGGATA
CGAATACGTATCCTGCATCTATGTCTATGTCTGTGTCGCCGGCGAGGAAA
CGCTCGATAGGGGATGTAGATGGGCATATTGCTGCTGCGAAAGGGGGGGA
TGATACGAATGCGAATACCACTACGGAGATGAAGATTGATGGAGATACTC
GTGCCGATACGGATGATAACAAGGAGAATCAGGATACACAAGTGAAATTA
TGTGATCTTGGGGATGAGAAGAAGACTTCGGTTGTTGGAGACTCGGCTGC
CACTACGACTGCTGCTCCGGCTGCGAAGAAGAGAAAGTTGTCGCCTGCCA
GTAAAGAGGCGAAGCAGCAGGAGAAGGAGGCGAGAGAGCGGCAGAAACTA
GAGGAGAAGGCTAAGAAGGAGGAAGAAAAGGCTAAGAGGGAAGAAGAGAA
GGCTAAGAAAGAGGAAGAAAAGAGGAAACGGGAGGCTGAGAAAGAGGAGG
AGAAGCGGGTGAAAGAAGAGGAGAAGCGAGCTAAGGAGGAGGAGAAGAAG
AAGCGCGAAGCGGAAAAGGAAGAGGAGCGCAAGAAGAAGGAAGAGAAACG
GAAGGTTAAAGAGGAGGAAAAGGCTGCTAAGGAGGAAGAGAAGCGGAAAA
AAGAGGAGGAGAAGCTGAAGAAAGAAAGAGCGCAAACGAAGCTGAACTCC
TTTTTCGCGAAACCGAAAACCCCGGCACAACCATCATCATCGAACACGAC
TCTCTCACCTAGCAAACCGACTGGCGCTGGCGCTTCGAATGACCTTTCTC
ATGACTCTGGATCGACTGTATCTGACTACCAGCGCGAGTTTCCGGACTTC
TTCCTCCAGTCACATACCACACTTGCGCCACCGCACAGGTTCCAGCGCGA
CAACGAAGCTCTGCAGCATACGCGGGAGAAAGTTGATGCCTACCTGAAAA
GTGCCAAGGATGGCAAGCATGAGCCTTTAATATTTCGTCCTTCCGAGCTC
TTCCAGCTTATGCCATACCAGCGACGGCGTGGACGATTGCCCGCTTCGGT
CAAACAGATCCTTTTACAGATGCAGAATCTTGCAGATCAGTCAGAGACCT
CCGAAGCTGCCCAGAGGGCTCGCGATCTTCTGAGGCAGGTGAGAATGAAA
TCGCTGAAATTCAGCGAGGATGTCCGGCCTCCATACCAGGGAACCTATAG
CAAGAGCCTGCCGGAGTCATCCGTCCGCCGGTTGATGCGCAATCCTTTTC
GTCGCGGGCTACCGGAGACGAATTATGACTACGACTCGGAAGCTGAGTGG
GAAGAGCCCGAGGAAGGCGAGGACCTAGATTCAGAGGAAGAAGAGGAAGG
GAGTGAAGATGGAGAGGATGACATGGATGGCTTCCTGGATGATGAGGATG
ACCACCCGATTGACGGCAAGAGACGTCACATCGTCGGGGATCTAGAACCC
GTCAGCACTGGTATACGATGGCAGGAACATGGCGTGGACCCGGAGCTGCA
GGCGTACAAAATGGAGACCATTTCCGACTCGGTGACTTTCCCTATTGACC
CGTTCTCCACTGCCTACTGGCAGAAACCGAAGGCGGCCGCGGAGCCAGCG
CAGGCGGCTGGGCTGGGGCGCTCGACACTGCACGCTTTCATGGGAGGACA
TACATCGTCGCCATCATCACACAAACCGACAGGGACTGGGCCGGGAGCGG
ACGGGGGCACCCTGGCCGTTCTGACAGCGGGGAGGACAAAGCGAACGTTG
CCGCCGGAGCAGCTGGAAGAGTTCAAGCAGGTGGTGAATGGCAGTGATCT
GACCAAGATGGGGCTAATTGAAATCTTGAAGAAACGGTTCCCCAAGGTGT
CCAAGGACAGTCTGAAAGACACGCTGAACAGCGTGGCCACGCGGGTGGGA
CAGAAAGAGGCTGACAAAAAATGGGTCTGCAACTAGATGTCGACGGATAC
CGCTACTGCCACTAACCCTGCCCCTGTGTCTTCGCCACACTCGTCTGGTT
CGTCCTTGTCGTCCTTGTCATCTCCTCCGTCGGATACGAATACGTATCCT
GCATCTATGTCTATGTCTGTGTCGCCGGCGAGGAAACGCTCGATAGGGGA
TGTAGATGGGCATATTGCTGCTGCGAAAGGGGGGGATGATACGAATGCGA
ATACCACTACGGAGATGAAGATTGATGGAGATACTCGTGCCGATACGGAT
GATAACAAGGAGAATCAGGATACACAAGTGAAATTATGTGATCTTGGGGA
TGAGAAGAAGACTTCGGTTGTTGGAGACTCGGCTGCCACTACGACTGCTG
CTCCGGCTGCGAAGAAGAGAAAGTTGTCGCCTGCCAGTAAAGAGGCGAAG
CAGCAGGAGAAGGAGGCGAGAGAGCGGCAGAAACTAGAGGAGAAGGCTAA
GAAGGAGGAAGAAAAGGCTAAGAGGGAAGAAGAGAAGGCTAAGAAAGAGG
AAGAAAAGAGGAAACGGGAGGCTGAGAAAGAGGAGGAGAAGCGGGTGAAA
GAAGAGGAGAAGCGAGCTAAGGAGGAGGAGAAGAAGAAGCGCGAAGCGGA
AAAGGAAGAGGAGCGCAAGAAGAAGGAAGAGAAACGGAAGGTTAAAGAGG
AGGAAAAGGCTGCTAAGGAGGAAGAGAAGCGGAAAAAAGAGGAGGAGAAG
CTGAAGAAAGAAAGAGCGCAAACGAAGCTGAACTCCTTTTTCGCGAAACC
GAAAACCCCGGCACAACCATCATCATCGAACACGACTCTCTCACCTAGCA
AACCGACTGGCGCTGGCGCTTCGAATGACCTTTCTCATGACTCTGGATCG
ACTGTATCTGACTACCAGCGCGAGTTTCCGGACTTCTTCCTCCAGTCACA
TACCACACTTGCGCCACCGCACAGGTTCCAGCGCGACAACGAAGCTCTGC
AGCATACGCGGGAGAAAGTTGATGCCTACCTGAAAAGTGCCAAGGATGGC
AAGCATGAGCCTTTAATATTTCGTCCTTCCGAGCTCTTCCAGCTTATGCC
ATACCAGCGACGGCGTGGACGATTGCCCGCTTCGGTCAAACAGATCCTTT
TACAGATGCAGAATCTTGCAGATCAGTCAGAGACCTCCGAAGCTGCCCAG
AGGGCTCGCGATCTTCTGAGGCAGGTGAGAATGAAATCGCTGAAATTCAG
CGAGGATGTCCGGCCTCCATACCAGGGAACCTATAGCAAGAGCCTGCCGG
AGTCATCCGTCCGCCGGTTGATGCGCAATCCTTTTCGTCGCGGGCTACCG
GAGACGAATTATGACTACGACTCGGAAGCTGAGTGGGAAGAGCCCGAGGA
AGGCGAGGACCTAGATTCAGAGGAAGAAGAGGAAGGGAGTGAAGATGGAG
AGGATGACATGGATGGCTTCCTGGATGATGAGGATGACCACCCGATTGAC
GGCAAGAGACGTCACATCGTCGGGGATCTAGAACCCGTCAGCACTGGTAT
ACGATGGCAGGAACATGGCGTGGACCCGGAGCTGCAGGCGTACAAAATGG
AGACCATTTCCGACTCGGTGACTTTCCCTATTGACCCGTTCTCCACTGCC
TACTGGCAGAAACCGAAGGCGGCCGCGGAGCCAGCGCAGGCGGCTGGGCT
GGGGCGCTCGACACTGCACGCTTTCATGGGAGGACATACATCGTCGCCAT
CATCACACAAACCGACAGGGACTGGGCCGGGAGCGGACGGGGGCACCCTG
GCCGTTCTGACAGCGGGGAGGACAAAGCGAACGTTGCCGCCGGAGCAGCT
GGAAGAGTTCAAGCAGGTGGTGAATGGCAGTGATCTGACCAAGATGGGGC
TAATTGAAATCTTGAAGAAACGGTTCCCCAAGGTGTCCAAGGACAGTCTG
AAAGACACGCTGAACAGCGTGGCCACGCGGGTGGGACAGAAAGAGGCTGA
CAAAAAATGGGTCTGCAACTAGATGTCGACGGATACCGCTACTGCCACTA
ACCCTGCCCCTGTGTCTTCGCCACACTCGTCTGGTTCGTCCTTGTCGTCC
TTGTCATCTCCTCCGTCGGATACGAATACGTATCCTGCATCTATGTCTAT
GTCTGTGTCGCCGGCGAGGAAACGCTCGATAGGGGATGTAGATGGGCATA
TTGCTGCTGCGAAAGGGGGGGATGATACGAATGCGAATACCACTACGGAG
ATGAAGATTGATGGAGATACTCGTGCCGATACGGATGATAACAAGGAGAA
TCAGGATACACAAGTGAAATTATGTGATCTTGGGGATGAGAAGAAGACTT
CGGTTGTTGGAGACTCGGCTGCCACTACGACTGCTGCTCCGGCTGCGAAG
AAGAGAAAGTTGTCGCCTGCCAGTAAAGAGGCGAAGCAGCAGGAGAAGGA
GGCGAGAGAGCGGCAGAAACTAGAGGAGAAGGCTAAGAAGGAGGAAGAAA
AGGCTAAGAGGGAAGAAGAGAAGGCTAAGAAAGAGGAAGAAAAGAGGAAA
CGGGAGGCTGAGAAAGAGGAGGAGAAGCGGGTGAAAGAAGAGGAGAAGCG
AGCTAAGGAGGAGGAGAAGAAGAAGCGCGAAGCGGAAAAGGAAGAGGAGC
GCAAGAAGAAGGAAGAGAAACGGAAGGTTAAAGAGGAGGAAAAGGCTGCT
AAGGAGGAAGAGAAGCGGAAAAAAGAGGAGGAGAAGCTGAAGAAAGAAAG
AGCGCAAACGAAGCTGAACTCCTTTTTCGCGAAACCGAAAACCCCGGCAC
AACCATCATCATCGAACACGACTCTCTCACCTAGCAAACCGACTGGCGCT
GGCGCTTCGAATGACCTTTCTCATGACTCTGGATCGACTGTATCTGACTA
CCAGCGCGAGTTTCCGGACTTCTTCCTCCAGTCACATACCACACTTGCGC
CACCGCACAGGTTCCAGCGCGACAACGAAGCTCTGCAGCATACGCGGGAG
AAAGTTGATGCCTACCTGAAAAGTGCCAAGGATGGCAAGCATGAGCCTTT
AATATTTCGTCCTTCCGAGCTCTTCCAGCTTATGCCATACCAGCGACGGC
GTGGACGATTGCCCGCTTCGGTCAAACAGATCCTTTTACAGATGCAGAAT
CTTGCAGATCAGTCAGAGACCTCCGAAGCTGCCCAGAGGGCTCGCGATCT
TCTGAGGCAGGTGAGAATGAAATCGCTGAAATTCAGCGAGGATGTCCGGC
CTCCATACCAGGGAACCTATAGCAAGAGCCTGCCGGAGTCATCCGTCCGC
CGGTTGATGCGCAATCCTTTTCGTCGCGGGCTACCGGAGACGAATTATGA
CTACGACTCGGAAGCTGAGTGGGAAGAGCCCGAGGAAGGCGAGGACCTAG
ATTCAGAGGAAGAAGAGGAAGGGAGTGAAGATGGAGAGGATGACATGGAT
GGCTTCCTGGATGATGAGGATGACCACCCGATTGACGGCAAGAGACGTCA
CATCGTCGGGGATCTAGAACCCGTCAGCACTGGTATACGATGGCAGGAAC
ATGGCGTGGACCCGGAGCTGCAGGCGTACAAAATGGAGACCATTTCCGAC
TCGGTGACTTTCCCTATTGACCCGTTCTCCACTGCCTACTGGCAGAAACC
GAAGGCGGCCGCGGAGCCAGCGCAGGCGGCTGGGCTGGGGCGCTCGACAC
TGCACGCTTTCATGGGAGGACATACATCGTCGCCATCATCACACAAACCG
ACAGGGACTGGGCCGGGAGCGGACGGGGGCACCCTGGCCGTTCTGACAGC
GGGGAGGACAAAGCGAACGTTGCCGCCGGAGCAGCTGGAAGAGTTCAAGC
AGGTGGTGAATGGCAGTGATCTGACCAAGATGGGGCTAATTGAAATCTTG
AAGAAACGGTTCCCCAAGGTGTCCAAGGACAGTCTGAAAGACACGCTGAA
CAGCGTGGCCACGCGGGTGGGACAGAAAGAGGCTGACAAAAAATGGGTCT
GCAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000714-T1.utr5p1 | KJC3_000714-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000714-T1.utr3p1 | KJC3_000714-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022043 |
| DBxref | PFAM:PF12253 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1636977..1640632 + |
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