|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1679742..1682662- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000728-T1 ID=KJC3_000728-T1|Name=KJC3_000728-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2921bp|location=Sequence derived from alignment at ch1:1679742..1682662- (Aspergillus niger KJC3)
AATGGAATGAATGCGTGTCTCCTGTTTTCTCAACTACAATCACGGACTGC
GTACCTATTCGATGCCTGGCCACTGCAAGGTCTCTGTTGAGTTGCCGCTG
TGACTTCTGCTTCTTTTCCCCACCATGAGACCTCCAGTGCCAGATGTTGC
GCTGCCTCGATCTCGCAAGGCCTCCATCGAACAGCAGTGGATCGATCCCC
GCAGTGCCGCCCCCGCGACCTTCTTTCTGTCCCGCAATCACGGTCTCGAC
CACGATGACGACCTCTCCTCTGATGAGCCCGATGCCTCCAGGACGAGTAT
GTACGGAGTACAGAGCCTTGAAGAAAGTATCCTCCAGACTAGTCAAACTG
CGTCCGTGTCCCAGTCAGATCAGATAGTTGGTAGTAAGGCCGCCGGAGTG
GAACCGATTTCCACCTCTCAATCTCCCAACCGCGACGATAAGGAGGACGA
TGACGACCAGCTTTCCGGACTCAACCGCCGCAGGTCTACGCTCAAGCCCC
TCGATACTATTCATTCTAATAGACTGGATGCCTCTATTACCTCGGACCTG
ATCTCTCCCCGGCCCTTCACCCCCCTGAATCTCAGCAACCCCGACGACCC
TTCATCTCTCCCTAGCAGTCCCAAATCTACTTCGAACCAATCTATGCGCC
ACCTAGATGAGATCTCGATCACGGATGACTTGAGTAGCCAGGCTGTTGCC
TCTGGAGAAGAAGACGATGATGCTCGATCTATCCACAACTCAGAGCACGA
TAGCACATCCCAGTTTATCATGCCAAGCATCAAGATGCCTAGTCGGAGAC
CCTTCACATCGCGCGGGAAGTCACTCGGAAGGTTCAAAATACTTGTTGCG
GGCGCTTCTGGTAAGTCCTCTTATCTTCAAATTCGTAGTGTCTGTGATCC
TGCGGAGTGCGTGCTGACTGATGCTGCAGGCTCTGGGAAATCATCTCTCA
TTAGGTCGATCGTCCAGGCTTGTGAGGACATTGTACATGTAGACGACTTT
CCACCTACCTATACCTCGACACCGTCGCGGACATCTCTTACGACGATCCA
ACTATCTCAGGCACATCGACTACCGTTGTCAACTACATCGGAGATCTACG
CCAGTACCAAGCCGTACCCATCCTGGTGGTCAGACTTGGAAGACTCACGC
GTGCTGCGCCGTAGGAGAAGTACAGGTGATGTAGTTCTAGAACGCAATAT
CTGCTTCGTTGATACACCTGCAACTTCGCTGAGTCGCACCGGACAAGTGG
ATGCCATCATACATTACATACGTCAACAGCTATTCCGCGCAACAACAGCT
ATTGATTCTTGCAATCACGACTTCCAAAACCTGCTTGCAGGGCAGGGTGG
CACCCAAGTTGATGCTGTACTTTATCTCGTCTCTGCAGGTATGTATTCTC
GGTTAGTTCGCTCTCGTTGATTAGATAGATGAGCTCACGTATTATCAGAT
ACCTTTGTGGCAGACATGGAATGCATCGACTTGCTATGCGAATGGACCAA
CGTCATCCCTCTGATATCCAAGGCTGACTTGTTGGCTCCTGAGCAGATCT
CTGCACTTAAGTCGGGGTTCCACAAGCATACGCAAGCCACTCCGGCCAAG
CCCTTCCTTTTCGGAAACACAGGTCTTGGGGCAGATGACTTTGACGGACA
GTTGCCTTTTGCAGTATCCTCGGCCAAAACCAGTGATGAAGATGTTATGG
ATGCTAGCACTTTAATGAGCCCCGACTATGTCCAACCCCTGGTGCCCTCC
GAATTGACTTTGTTAGTCCAGAGGTTATTCGACGCCGAGAATATCATTTG
GATGCGACACTCAGCTGCAAAGAAACTAGCCCAACAGCAACGAGAGCATT
TCTGGCAACACCCAACTCGCCAACCTAGTACCCAACCAATTAATCATGGC
TCAAGCCGGGGTTCGCCCAGCTACACTATGGCTCGGATAGCAGATCACAC
GCGACAGGAAGAGAAAATGGCCCGTTTGCAGTTGGCAAAGTGGGCATCTG
AGTTGCAGCAAAGCCTTAAGAATGAACGAGAGAGATACGCTGCCATGGCA
AGGGGCGAGCGTGCCATCTGGCTCACGGAACGGTTAGGCGAGTGCGTAGT
AGACGGATCTCTGGTCCCCATTACACAAACGCCAGGCTTTTGCGGACTCC
GAGCTCCCTTGGAGAAAGCAAGCGGGGGCAGTCTTCTTGTTCGAGCGCAA
AGTGGGCAGAATGTGGAGTATCGCCTTGCCCGGATTCGCCCGCAAGACCC
TCTGGGACTTGTCTGGTTGTCCGAGGACCTCAAGCGGCGGGGCTGGGCCA
TCGTTCAGATCGTGGGCTCCTTTGGAGTTGTCGGGGGGCTGGCTCTTTGG
CTTGCTAAAGCATGGGGACTATCCTCGCGCAGTCTGTCTGAATGGCATTT
TGACTGGTGCGGTTCGACTGATTGAGTGATCCAGCCCTACTTACTTGCTA
GGGTGGGTACTTCACACTCGTATCCCCTCATTATCCCTTTTTACTCTACT
ATTTCCTATAACCCCCTCTCCAAATCATCTATAAGAGCTGGGAGACACAT
ATGTTCTTAGGGCAATAGGCGTCAACTGGATTGACTCGCATGCAAGCAAA
CCCCGGCGTTTCCACAGACACATTTTCACCTTCCCACATCTTTTCATATC
TCCCCCCCCTCTCTCTCTTTTTCTCTTTCACCGTTTCCCAACTCTCTTTC
CATCCACCCAATATTCATTTCTGGCGTTTTCCCACTGCATACAACTTCCC
CTCAGGTCACATCTAATGAAGAAATGTGCTCAATGTACTCACGAACCACA
ACACAACTCACCAGGGAGGCTAGGTGCCTAGTTCATCCCGTTTATGTGCC
TCCTTGCTTGATCAAATCTTTCTTCAGGTAGCTTACAGTCAATCAACTCG
TAATATGGACAAAATTGGGAA back to topCoding sequence (CDS) from alignment at ch1:1679742..1682662- >KJC3_000728-T1 ID=KJC3_000728-T1|Name=KJC3_000728-T1|organism=Aspergillus niger KJC3|type=CDS|length=6516bp|location=Sequence derived from alignment at ch1:1679742..1682662- (Aspergillus niger KJC3)
ATACCTTTGTGGCAGACATGGAATGCATCGACTTGCTATGCGAATGGACC
AACGTCATCCCTCTGATATCCAAGGCTGACTTGTTGGCTCCTGAGCAGAT
CTCTGCACTTAAGTCGGGGTTCCACAAGCATACGCAAGCCACTCCGGCCA
AGCCCTTCCTTTTCGGAAACACAGGTCTTGGGGCAGATGACTTTGACGGA
CAGTTGCCTTTTGCAGTATCCTCGGCCAAAACCAGTGATGAAGATGTTAT
GGATGCTAGCACTTTAATGAGCCCCGACTATGTCCAACCCCTGGTGCCCT
CCGAATTGACTTTGTTAGTCCAGAGGTTATTCGACGCCGAGAATATCATT
TGGATGCGACACTCAGCTGCAAAGAAACTAGCCCAACAGCAACGAGAGCA
TTTCTGGCAACACCCAACTCGCCAACCTAGTACCCAACCAATTAATCATG
GCTCAAGCCGGGGTTCGCCCAGCTACACTATGGCTCGGATAGCAGATCAC
ACGCGACAGGAAGAGAAAATGGCCCGTTTGCAGTTGGCAAAGTGGGCATC
TGAGTTGCAGCAAAGCCTTAAGAATGAACGAGAGAGATACGCTGCCATGG
CAAGGGGCGAGCGTGCCATCTGGCTCACGGAACGGTTAGGCGAGTGCGTA
GTAGACGGATCTCTGGTCCCCATTACACAAACGCCAGGCTTTTGCGGACT
CCGAGCTCCCTTGGAGAAAGCAAGCGGGGGCAGTCTTCTTGTTCGAGCGC
AAAGTGGGCAGAATGTGGAGTATCGCCTTGCCCGGATTCGCCCGCAAGAC
CCTCTGGGACTTGTCTGGTTGTCCGAGGACCTCAAGCGGCGGGGCTGGGC
CATCGTTCAGATCGTGGGCTCCTTTGGAGTTGTCGGGGGGCTGGCTCTTT
GGCTTGCTAAAGCATGGGGACTATCCTCGCGCAGTCTGTCTGAATGGCAT
TTTGACTGGTGCGGTTCGACTGATTGAGCTCTGGGAAATCATCTCTCATT
AGGTCGATCGTCCAGGCTTGTGAGGACATTGTACATGTAGACGACTTTCC
ACCTACCTATACCTCGACACCGTCGCGGACATCTCTTACGACGATCCAAC
TATCTCAGGCACATCGACTACCGTTGTCAACTACATCGGAGATCTACGCC
AGTACCAAGCCGTACCCATCCTGGTGGTCAGACTTGGAAGACTCACGCGT
GCTGCGCCGTAGGAGAAGTACAGGTGATGTAGTTCTAGAACGCAATATCT
GCTTCGTTGATACACCTGCAACTTCGCTGAGTCGCACCGGACAAGTGGAT
GCCATCATACATTACATACGTCAACAGCTATTCCGCGCAACAACAGCTAT
TGATTCTTGCAATCACGACTTCCAAAACCTGCTTGCAGGGCAGGGTGGCA
CCCAAGTTGATGCTGTACTTTATCTCGTCTCTGCAGATGAGACCTCCAGT
GCCAGATGTTGCGCTGCCTCGATCTCGCAAGGCCTCCATCGAACAGCAGT
GGATCGATCCCCGCAGTGCCGCCCCCGCGACCTTCTTTCTGTCCCGCAAT
CACGGTCTCGACCACGATGACGACCTCTCCTCTGATGAGCCCGATGCCTC
CAGGACGAGTATGTACGGAGTACAGAGCCTTGAAGAAAGTATCCTCCAGA
CTAGTCAAACTGCGTCCGTGTCCCAGTCAGATCAGATAGTTGGTAGTAAG
GCCGCCGGAGTGGAACCGATTTCCACCTCTCAATCTCCCAACCGCGACGA
TAAGGAGGACGATGACGACCAGCTTTCCGGACTCAACCGCCGCAGGTCTA
CGCTCAAGCCCCTCGATACTATTCATTCTAATAGACTGGATGCCTCTATT
ACCTCGGACCTGATCTCTCCCCGGCCCTTCACCCCCCTGAATCTCAGCAA
CCCCGACGACCCTTCATCTCTCCCTAGCAGTCCCAAATCTACTTCGAACC
AATCTATGCGCCACCTAGATGAGATCTCGATCACGGATGACTTGAGTAGC
CAGGCTGTTGCCTCTGGAGAAGAAGACGATGATGCTCGATCTATCCACAA
CTCAGAGCACGATAGCACATCCCAGTTTATCATGCCAAGCATCAAGATGC
CTAGTCGGAGACCCTTCACATCGCGCGGGAAGTCACTCGGAAGGTTCAAA
ATACTTGTTGCGGGCGCTTCTGATACCTTTGTGGCAGACATGGAATGCAT
CGACTTGCTATGCGAATGGACCAACGTCATCCCTCTGATATCCAAGGCTG
ACTTGTTGGCTCCTGAGCAGATCTCTGCACTTAAGTCGGGGTTCCACAAG
CATACGCAAGCCACTCCGGCCAAGCCCTTCCTTTTCGGAAACACAGGTCT
TGGGGCAGATGACTTTGACGGACAGTTGCCTTTTGCAGTATCCTCGGCCA
AAACCAGTGATGAAGATGTTATGGATGCTAGCACTTTAATGAGCCCCGAC
TATGTCCAACCCCTGGTGCCCTCCGAATTGACTTTGTTAGTCCAGAGGTT
ATTCGACGCCGAGAATATCATTTGGATGCGACACTCAGCTGCAAAGAAAC
TAGCCCAACAGCAACGAGAGCATTTCTGGCAACACCCAACTCGCCAACCT
AGTACCCAACCAATTAATCATGGCTCAAGCCGGGGTTCGCCCAGCTACAC
TATGGCTCGGATAGCAGATCACACGCGACAGGAAGAGAAAATGGCCCGTT
TGCAGTTGGCAAAGTGGGCATCTGAGTTGCAGCAAAGCCTTAAGAATGAA
CGAGAGAGATACGCTGCCATGGCAAGGGGCGAGCGTGCCATCTGGCTCAC
GGAACGGTTAGGCGAGTGCGTAGTAGACGGATCTCTGGTCCCCATTACAC
AAACGCCAGGCTTTTGCGGACTCCGAGCTCCCTTGGAGAAAGCAAGCGGG
GGCAGTCTTCTTGTTCGAGCGCAAAGTGGGCAGAATGTGGAGTATCGCCT
TGCCCGGATTCGCCCGCAAGACCCTCTGGGACTTGTCTGGTTGTCCGAGG
ACCTCAAGCGGCGGGGCTGGGCCATCGTTCAGATCGTGGGCTCCTTTGGA
GTTGTCGGGGGGCTGGCTCTTTGGCTTGCTAAAGCATGGGGACTATCCTC
GCGCAGTCTGTCTGAATGGCATTTTGACTGGTGCGGTTCGACTGATTGAG
CTCTGGGAAATCATCTCTCATTAGGTCGATCGTCCAGGCTTGTGAGGACA
TTGTACATGTAGACGACTTTCCACCTACCTATACCTCGACACCGTCGCGG
ACATCTCTTACGACGATCCAACTATCTCAGGCACATCGACTACCGTTGTC
AACTACATCGGAGATCTACGCCAGTACCAAGCCGTACCCATCCTGGTGGT
CAGACTTGGAAGACTCACGCGTGCTGCGCCGTAGGAGAAGTACAGGTGAT
GTAGTTCTAGAACGCAATATCTGCTTCGTTGATACACCTGCAACTTCGCT
GAGTCGCACCGGACAAGTGGATGCCATCATACATTACATACGTCAACAGC
TATTCCGCGCAACAACAGCTATTGATTCTTGCAATCACGACTTCCAAAAC
CTGCTTGCAGGGCAGGGTGGCACCCAAGTTGATGCTGTACTTTATCTCGT
CTCTGCAGATGAGACCTCCAGTGCCAGATGTTGCGCTGCCTCGATCTCGC
AAGGCCTCCATCGAACAGCAGTGGATCGATCCCCGCAGTGCCGCCCCCGC
GACCTTCTTTCTGTCCCGCAATCACGGTCTCGACCACGATGACGACCTCT
CCTCTGATGAGCCCGATGCCTCCAGGACGAGTATGTACGGAGTACAGAGC
CTTGAAGAAAGTATCCTCCAGACTAGTCAAACTGCGTCCGTGTCCCAGTC
AGATCAGATAGTTGGTAGTAAGGCCGCCGGAGTGGAACCGATTTCCACCT
CTCAATCTCCCAACCGCGACGATAAGGAGGACGATGACGACCAGCTTTCC
GGACTCAACCGCCGCAGGTCTACGCTCAAGCCCCTCGATACTATTCATTC
TAATAGACTGGATGCCTCTATTACCTCGGACCTGATCTCTCCCCGGCCCT
TCACCCCCCTGAATCTCAGCAACCCCGACGACCCTTCATCTCTCCCTAGC
AGTCCCAAATCTACTTCGAACCAATCTATGCGCCACCTAGATGAGATCTC
GATCACGGATGACTTGAGTAGCCAGGCTGTTGCCTCTGGAGAAGAAGACG
ATGATGCTCGATCTATCCACAACTCAGAGCACGATAGCACATCCCAGTTT
ATCATGCCAAGCATCAAGATGCCTAGTCGGAGACCCTTCACATCGCGCGG
GAAGTCACTCGGAAGGTTCAAAATACTTGTTGCGGGCGCTTCTGATACCT
TTGTGGCAGACATGGAATGCATCGACTTGCTATGCGAATGGACCAACGTC
ATCCCTCTGATATCCAAGGCTGACTTGTTGGCTCCTGAGCAGATCTCTGC
ACTTAAGTCGGGGTTCCACAAGCATACGCAAGCCACTCCGGCCAAGCCCT
TCCTTTTCGGAAACACAGGTCTTGGGGCAGATGACTTTGACGGACAGTTG
CCTTTTGCAGTATCCTCGGCCAAAACCAGTGATGAAGATGTTATGGATGC
TAGCACTTTAATGAGCCCCGACTATGTCCAACCCCTGGTGCCCTCCGAAT
TGACTTTGTTAGTCCAGAGGTTATTCGACGCCGAGAATATCATTTGGATG
CGACACTCAGCTGCAAAGAAACTAGCCCAACAGCAACGAGAGCATTTCTG
GCAACACCCAACTCGCCAACCTAGTACCCAACCAATTAATCATGGCTCAA
GCCGGGGTTCGCCCAGCTACACTATGGCTCGGATAGCAGATCACACGCGA
CAGGAAGAGAAAATGGCCCGTTTGCAGTTGGCAAAGTGGGCATCTGAGTT
GCAGCAAAGCCTTAAGAATGAACGAGAGAGATACGCTGCCATGGCAAGGG
GCGAGCGTGCCATCTGGCTCACGGAACGGTTAGGCGAGTGCGTAGTAGAC
GGATCTCTGGTCCCCATTACACAAACGCCAGGCTTTTGCGGACTCCGAGC
TCCCTTGGAGAAAGCAAGCGGGGGCAGTCTTCTTGTTCGAGCGCAAAGTG
GGCAGAATGTGGAGTATCGCCTTGCCCGGATTCGCCCGCAAGACCCTCTG
GGACTTGTCTGGTTGTCCGAGGACCTCAAGCGGCGGGGCTGGGCCATCGT
TCAGATCGTGGGCTCCTTTGGAGTTGTCGGGGGGCTGGCTCTTTGGCTTG
CTAAAGCATGGGGACTATCCTCGCGCAGTCTGTCTGAATGGCATTTTGAC
TGGTGCGGTTCGACTGATTGAGCTCTGGGAAATCATCTCTCATTAGGTCG
ATCGTCCAGGCTTGTGAGGACATTGTACATGTAGACGACTTTCCACCTAC
CTATACCTCGACACCGTCGCGGACATCTCTTACGACGATCCAACTATCTC
AGGCACATCGACTACCGTTGTCAACTACATCGGAGATCTACGCCAGTACC
AAGCCGTACCCATCCTGGTGGTCAGACTTGGAAGACTCACGCGTGCTGCG
CCGTAGGAGAAGTACAGGTGATGTAGTTCTAGAACGCAATATCTGCTTCG
TTGATACACCTGCAACTTCGCTGAGTCGCACCGGACAAGTGGATGCCATC
ATACATTACATACGTCAACAGCTATTCCGCGCAACAACAGCTATTGATTC
TTGCAATCACGACTTCCAAAACCTGCTTGCAGGGCAGGGTGGCACCCAAG
TTGATGCTGTACTTTATCTCGTCTCTGCAGATGAGACCTCCAGTGCCAGA
TGTTGCGCTGCCTCGATCTCGCAAGGCCTCCATCGAACAGCAGTGGATCG
ATCCCCGCAGTGCCGCCCCCGCGACCTTCTTTCTGTCCCGCAATCACGGT
CTCGACCACGATGACGACCTCTCCTCTGATGAGCCCGATGCCTCCAGGAC
GAGTATGTACGGAGTACAGAGCCTTGAAGAAAGTATCCTCCAGACTAGTC
AAACTGCGTCCGTGTCCCAGTCAGATCAGATAGTTGGTAGTAAGGCCGCC
GGAGTGGAACCGATTTCCACCTCTCAATCTCCCAACCGCGACGATAAGGA
GGACGATGACGACCAGCTTTCCGGACTCAACCGCCGCAGGTCTACGCTCA
AGCCCCTCGATACTATTCATTCTAATAGACTGGATGCCTCTATTACCTCG
GACCTGATCTCTCCCCGGCCCTTCACCCCCCTGAATCTCAGCAACCCCGA
CGACCCTTCATCTCTCCCTAGCAGTCCCAAATCTACTTCGAACCAATCTA
TGCGCCACCTAGATGAGATCTCGATCACGGATGACTTGAGTAGCCAGGCT
GTTGCCTCTGGAGAAGAAGACGATGATGCTCGATCTATCCACAACTCAGA
GCACGATAGCACATCCCAGTTTATCATGCCAAGCATCAAGATGCCTAGTC
GGAGACCCTTCACATCGCGCGGGAAGTCACTCGGAAGGTTCAAAATACTT
GTTGCGGGCGCTTCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000728-T1.utr3p1 | KJC3_000728-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000728-T1.utr5p1 | KJC3_000728-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR030379 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1679742..1682662 - |
|
