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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1685904..1689130+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000729-T1 ID=KJC3_000729-T1|Name=KJC3_000729-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3227bp|location=Sequence derived from alignment at ch1:1685904..1689130+ (Aspergillus niger KJC3)
CCTCCTCTTCTCCGGACTGGCGACTCCGGACCAGATTGTTCTGTAAAAGC
CGTCGAACTTAACCTTTAGCGTTTTAGAGACTCCGAAAATTATCCACAAT
TGTTCCATTCCACCCTTCTCCCTCCTCCTCCCCCCGGTATCGACTCTGAC
TTAGTCACCATGAACTAAAGTCCATTCACTCTACTATTTGCTCCTCAGTC
CTCTCGAATCTCCTGCGCCGCTGTTTGCCCCCCCGCCCTCTGTCCGCTAA
TTAACCTTCCACCATGGCTTGAATGAATGGTACACCCATTTCTGCTGCTT
GCTTTAATTTACTCTCGACTACGGCGGGATTCTTCTCTTGATTCTCACTT
CCTCTCTTGGGTCTAGTCCCTCAATTTTGTTCTGTATCCTGCCGGTGCTC
TTTCTTCCTTCCGTGGCCCCCTCCATCACCGCCGGTACCCTTTCGTTCGG
CTTCCTCCTTACCGTTTCCCTTTCTTCTTTTCTCTACCTCTCCTCCCTCG
TACTTTCTTCATATTACATCTGCTTGGGCTTCATTCAGCCTTACCATTAC
CAACACACCCTCCTCTTCTCCTCTATCATCATCACCGCTCTCGCCATGCC
CAGCAATTCTTGTTGAGCTTTTTGCTCTCCCGCCCTGTTATTCCCATCCT
CTATCTTGCGCCGCGTTCCCGAAAATCATTCGTTCCTAGCCTACCGGGTT
TGCTTTTGACTTTGCCTTCCCTTTCTCCGGCTCGATTGGCCTTCACTTCG
CCCGCACCCAAAAATTCCACTTCCGATCGGTCATCTCCAGCATCCTGTCT
TCCGTCTTCTGTTCTTAACCCGCTGTTACTGTCTGAAAGGCAGCATTTCT
CGTGATGGAGCAAGAGCACCCTCTGGCTTGGTCGGATATGACCAACCCGG
GCGATGATGAATTCACCAACTTCCTCGAGTTTGGCATGCAGTTCCCTGAT
GTGGAGGGGCATGGGCCAAGTGACCCTCATGCTGCCCGGCCTCTTGCCCA
CCCGGCCTCCATGTCGATGCCCGCCACAACGGCACCTGCGCAGGAGCAAT
TGGTCCGCATGGATACCGATAATGTTACCACCCAGTCGCCCTCGTACGCC
CACCTCATGAACAATGATTTTTCCCTTGACCTTTCCAATCACGGGCAGCA
GGCCCAGCCGCATCCCTCGTCTTACTCGAATGCCCCAGTCACCCCGGCAT
TCTACGCGCACAAGCCCCCGCAGCCCCTGTACTTTCACCCTCAGCAGCAG
CACCAACCAATGCAGGAACAGTCACACCAGCTTTCCAACCACTCGCACCC
GACACAGCAAGCTTACGTTCCTCACGGTCAGACTGTGATACCACCCACCC
CCAACAGTATCGAACTCCAAGGAAGTGCCGCTACGCACCCACACCGGACC
GATGATAATCATGAGATGTACGAGCGGTTCACGCGAATGAATGACGAACA
GGTGAGCATAATTCTTTTTAAATCTGGAGTTTAGCCTGCATAATCTAATG
CATGCACCCGCTCTCCGCAGGCCCTTTACACGCCCCTGGTCTCACCTGCC
ATGACCCCATTGGAAAGTCAATTCCGCTTCCCTGAATACACCATCCCTGG
AGAGTACTTCACCCCTCTCACCTCGCCGGCTCTCGAAGCCCACACCTCCA
ATCCCACTGGTTACCCCTTCCACACCGGCCAAATCTCTGAAATGGGATTT
GTGCCCTCCCCGGCCGATAACGCACTCCCTATGTCGTCAGCCCCCTCCTC
GCCGGGTCTGATGCGAAAACATCGGCGCCAGCCTTCGACCACCAAGCCCT
TCTCCGCTCGCGCTAAAAAGCAACAATCGCCTTCAGTCCGGCCCCAGGCA
CGGAAAAAGTCACTTTTGAACATCAACTCGGATGAGGTCTTGAATAGCTT
AAGCCAGGACCAGGGAAGTAGCAAATCGCGCAGTTCTGGTGGTAGTGGTC
TTCGCTACGGAAGTAACGAAAGCTCTGGGCAAGATTCCGTCTCCCCAGAG
CCTCTATCTGAACCACTGATGCCGCCACCTGCTCTTCCTCCGTCCCGCAA
GTCTCCCGCGATTGCCCCTCAGACCAATCAAGTGTCACAAGCCAATGAAC
CCGCAACCCCGGCTTTGCTGATGCGCATTCAACGGTCCCCGCACAGCAAT
GCCTCTACTGGCCCGATGGCAACTGTGTCCAGGCCTGCTCCTTCTGAACC
ACATGATGATATCATGGAAGATGTTGTCCTTCCAGAAGCCGCTACCTCGT
ATGAACCGGTCTCGAGACCTCAAGTGAGCCGCATTGACACCACAGTACGG
GCGGATTCGGCGTCTTCGACTACTACGCCAGGCAGTGCCACCCCGGCTAT
GGAACCCAAGTCTGCTCCAGTGGTCCACAGACCTTCCAGTTCTATCGCGC
CCAGTCCCCGTACTTTGGCTATGCCCTCCCCCAGCGGACCGGTACCAAAG
AAGTCCGATACTCCGAAATTAGGACCCCTGGGCCGAAAGCGGCAGAGTCT
CAGCTCGTCTCAGCCTAGCCCTAATCTACGTCCCAAGATAAGCCCCAGTA
TACAGCCACTGGTTCGAGGTGATGGTAAGTGCTTTTCACGCAATCTGCGC
CTTTATCGCCCGGCGGACTCTTATCGACTGGAGAGTTGCTTTTCGACACC
TCTTGCGGCATTTCAAGCTAACTAGTGTTGTCTAGGAGGGATCACAAGCG
AAACTTCGGCCCTGTACCTTGCGTCAAAGTCGAACTATCAGCATATCTTA
GACGGCACTCTTTTGCCTGGCGTCTCCTACCCTGAAACCTTGGCCGAGAA
CCTGAGCTCAAAACGGACGAATCATAAACTCGCAGAGCAGGGACGAAGGA
ATCGCATCAACAATGCGCTCAAAGAGATCGAGACTCTTATCCCGACATCA
TTCGTTCAGATAAAGCATGCCAAAGAAGCTGCAATCTGCAACGCCAAGGG
AGGGGATAAGGAGAAGGAGAAAGAAAAGGAAAAGGCCGGAAACCAACCTA
TCAGCAAGGCTAGCACTGTGGAGATGGCTATTGATTATATCAAAGCCTTA
CAACAGGAACTGGAAGAAACAAAGGGCAAATTAGCAGCCGCTGAAGAGCG
CCTGGGGGAGGGGAAGGGGCTGGGAAAGCGTGATGACAACACAACGAACC
CTGAAAATGGGAAAACTGCAAATCCCGTTGATGCGGAATCGGCAGCCACC
AGTCATGAAATAGACAACTCTGCATAG back to topCoding sequence (CDS) from alignment at ch1:1685904..1689130+ >KJC3_000729-T1 ID=KJC3_000729-T1|Name=KJC3_000729-T1|organism=Aspergillus niger KJC3|type=CDS|length=6579bp|location=Sequence derived from alignment at ch1:1685904..1689130+ (Aspergillus niger KJC3)
ATGGAGCAAGAGCACCCTCTGGCTTGGTCGGATATGACCAACCCGGGCGA
TGATGAATTCACCAACTTCCTCGAGTTTGGCATGCAGTTCCCTGATGTGG
AGGGGCATGGGCCAAGTGACCCTCATGCTGCCCGGCCTCTTGCCCACCCG
GCCTCCATGTCGATGCCCGCCACAACGGCACCTGCGCAGGAGCAATTGGT
CCGCATGGATACCGATAATGTTACCACCCAGTCGCCCTCGTACGCCCACC
TCATGAACAATGATTTTTCCCTTGACCTTTCCAATCACGGGCAGCAGGCC
CAGCCGCATCCCTCGTCTTACTCGAATGCCCCAGTCACCCCGGCATTCTA
CGCGCACAAGCCCCCGCAGCCCCTGTACTTTCACCCTCAGCAGCAGCACC
AACCAATGCAGGAACAGTCACACCAGCTTTCCAACCACTCGCACCCGACA
CAGCAAGCTTACGTTCCTCACGGTCAGACTGTGATACCACCCACCCCCAA
CAGTATCGAACTCCAAGGAAGTGCCGCTACGCACCCACACCGGACCGATG
ATAATCATGAGATGTACGAGCGGTTCACGCGAATGAATGACGAACAGGCC
CTTTACACGCCCCTGGTCTCACCTGCCATGACCCCATTGGAAAGTCAATT
CCGCTTCCCTGAATACACCATCCCTGGAGAGTACTTCACCCCTCTCACCT
CGCCGGCTCTCGAAGCCCACACCTCCAATCCCACTGGTTACCCCTTCCAC
ACCGGCCAAATCTCTGAAATGGGATTTGTGCCCTCCCCGGCCGATAACGC
ACTCCCTATGTCGTCAGCCCCCTCCTCGCCGGGTCTGATGCGAAAACATC
GGCGCCAGCCTTCGACCACCAAGCCCTTCTCCGCTCGCGCTAAAAAGCAA
CAATCGCCTTCAGTCCGGCCCCAGGCACGGAAAAAGTCACTTTTGAACAT
CAACTCGGATGAGGTCTTGAATAGCTTAAGCCAGGACCAGGGAAGTAGCA
AATCGCGCAGTTCTGGTGGTAGTGGTCTTCGCTACGGAAGTAACGAAAGC
TCTGGGCAAGATTCCGTCTCCCCAGAGCCTCTATCTGAACCACTGATGCC
GCCACCTGCTCTTCCTCCGTCCCGCAAGTCTCCCGCGATTGCCCCTCAGA
CCAATCAAGTGTCACAAGCCAATGAACCCGCAACCCCGGCTTTGCTGATG
CGCATTCAACGGTCCCCGCACAGCAATGCCTCTACTGGCCCGATGGCAAC
TGTGTCCAGGCCTGCTCCTTCTGAACCACATGATGATATCATGGAAGATG
TTGTCCTTCCAGAAGCCGCTACCTCGTATGAACCGGTCTCGAGACCTCAA
GTGAGCCGCATTGACACCACAGTACGGGCGGATTCGGCGTCTTCGACTAC
TACGCCAGGCAGTGCCACCCCGGCTATGGAACCCAAGTCTGCTCCAGTGG
TCCACAGACCTTCCAGTTCTATCGCGCCCAGTCCCCGTACTTTGGCTATG
CCCTCCCCCAGCGGACCGGTACCAAAGAAGTCCGATACTCCGAAATTAGG
ACCCCTGGGCCGAAAGCGGCAGAGTCTCAGCTCGTCTCAGCCTAGCCCTA
ATCTACGTCCCAAGATAAGCCCCAGTATACAGCCACTGGTTCGAGGTGAT
GGAGGGATCACAAGCGAAACTTCGGCCCTGTACCTTGCGTCAAAGTCGAA
CTATCAGCATATCTTAGACGGCACTCTTTTGCCTGGCGTCTCCTACCCTG
AAACCTTGGCCGAGAACCTGAGCTCAAAACGGACGAATCATAAACTCGCA
GAGCAGGGACGAAGGAATCGCATCAACAATGCGCTCAAAGAGATCGAGAC
TCTTATCCCGACATCATTCGTTCAGATAAAGCATGCCAAAGAAGCTGCAA
TCTGCAACGCCAAGGGAGGGGATAAGGAGAAGGAGAAAGAAAAGGAAAAG
GCCGGAAACCAACCTATCAGCAAGGCTAGCACTGTGGAGATGGCTATTGA
TTATATCAAAGCCTTACAACAGGAACTGGAAGAAACAAAGGGCAAATTAG
CAGCCGCTGAAGAGCGCCTGGGGGAGGGGAAGGGGCTGGGAAAGCGTGAT
GACAACACAACGAACCCTGAAAATGGGAAAACTGCAAATCCCGTTGATGC
GGAATCGGCAGCCACCAGTCATGAAATAGACAACTCTGCATAGATGGAGC
AAGAGCACCCTCTGGCTTGGTCGGATATGACCAACCCGGGCGATGATGAA
TTCACCAACTTCCTCGAGTTTGGCATGCAGTTCCCTGATGTGGAGGGGCA
TGGGCCAAGTGACCCTCATGCTGCCCGGCCTCTTGCCCACCCGGCCTCCA
TGTCGATGCCCGCCACAACGGCACCTGCGCAGGAGCAATTGGTCCGCATG
GATACCGATAATGTTACCACCCAGTCGCCCTCGTACGCCCACCTCATGAA
CAATGATTTTTCCCTTGACCTTTCCAATCACGGGCAGCAGGCCCAGCCGC
ATCCCTCGTCTTACTCGAATGCCCCAGTCACCCCGGCATTCTACGCGCAC
AAGCCCCCGCAGCCCCTGTACTTTCACCCTCAGCAGCAGCACCAACCAAT
GCAGGAACAGTCACACCAGCTTTCCAACCACTCGCACCCGACACAGCAAG
CTTACGTTCCTCACGGTCAGACTGTGATACCACCCACCCCCAACAGTATC
GAACTCCAAGGAAGTGCCGCTACGCACCCACACCGGACCGATGATAATCA
TGAGATGTACGAGCGGTTCACGCGAATGAATGACGAACAGGCCCTTTACA
CGCCCCTGGTCTCACCTGCCATGACCCCATTGGAAAGTCAATTCCGCTTC
CCTGAATACACCATCCCTGGAGAGTACTTCACCCCTCTCACCTCGCCGGC
TCTCGAAGCCCACACCTCCAATCCCACTGGTTACCCCTTCCACACCGGCC
AAATCTCTGAAATGGGATTTGTGCCCTCCCCGGCCGATAACGCACTCCCT
ATGTCGTCAGCCCCCTCCTCGCCGGGTCTGATGCGAAAACATCGGCGCCA
GCCTTCGACCACCAAGCCCTTCTCCGCTCGCGCTAAAAAGCAACAATCGC
CTTCAGTCCGGCCCCAGGCACGGAAAAAGTCACTTTTGAACATCAACTCG
GATGAGGTCTTGAATAGCTTAAGCCAGGACCAGGGAAGTAGCAAATCGCG
CAGTTCTGGTGGTAGTGGTCTTCGCTACGGAAGTAACGAAAGCTCTGGGC
AAGATTCCGTCTCCCCAGAGCCTCTATCTGAACCACTGATGCCGCCACCT
GCTCTTCCTCCGTCCCGCAAGTCTCCCGCGATTGCCCCTCAGACCAATCA
AGTGTCACAAGCCAATGAACCCGCAACCCCGGCTTTGCTGATGCGCATTC
AACGGTCCCCGCACAGCAATGCCTCTACTGGCCCGATGGCAACTGTGTCC
AGGCCTGCTCCTTCTGAACCACATGATGATATCATGGAAGATGTTGTCCT
TCCAGAAGCCGCTACCTCGTATGAACCGGTCTCGAGACCTCAAGTGAGCC
GCATTGACACCACAGTACGGGCGGATTCGGCGTCTTCGACTACTACGCCA
GGCAGTGCCACCCCGGCTATGGAACCCAAGTCTGCTCCAGTGGTCCACAG
ACCTTCCAGTTCTATCGCGCCCAGTCCCCGTACTTTGGCTATGCCCTCCC
CCAGCGGACCGGTACCAAAGAAGTCCGATACTCCGAAATTAGGACCCCTG
GGCCGAAAGCGGCAGAGTCTCAGCTCGTCTCAGCCTAGCCCTAATCTACG
TCCCAAGATAAGCCCCAGTATACAGCCACTGGTTCGAGGTGATGGAGGGA
TCACAAGCGAAACTTCGGCCCTGTACCTTGCGTCAAAGTCGAACTATCAG
CATATCTTAGACGGCACTCTTTTGCCTGGCGTCTCCTACCCTGAAACCTT
GGCCGAGAACCTGAGCTCAAAACGGACGAATCATAAACTCGCAGAGCAGG
GACGAAGGAATCGCATCAACAATGCGCTCAAAGAGATCGAGACTCTTATC
CCGACATCATTCGTTCAGATAAAGCATGCCAAAGAAGCTGCAATCTGCAA
CGCCAAGGGAGGGGATAAGGAGAAGGAGAAAGAAAAGGAAAAGGCCGGAA
ACCAACCTATCAGCAAGGCTAGCACTGTGGAGATGGCTATTGATTATATC
AAAGCCTTACAACAGGAACTGGAAGAAACAAAGGGCAAATTAGCAGCCGC
TGAAGAGCGCCTGGGGGAGGGGAAGGGGCTGGGAAAGCGTGATGACAACA
CAACGAACCCTGAAAATGGGAAAACTGCAAATCCCGTTGATGCGGAATCG
GCAGCCACCAGTCATGAAATAGACAACTCTGCATAGATGGAGCAAGAGCA
CCCTCTGGCTTGGTCGGATATGACCAACCCGGGCGATGATGAATTCACCA
ACTTCCTCGAGTTTGGCATGCAGTTCCCTGATGTGGAGGGGCATGGGCCA
AGTGACCCTCATGCTGCCCGGCCTCTTGCCCACCCGGCCTCCATGTCGAT
GCCCGCCACAACGGCACCTGCGCAGGAGCAATTGGTCCGCATGGATACCG
ATAATGTTACCACCCAGTCGCCCTCGTACGCCCACCTCATGAACAATGAT
TTTTCCCTTGACCTTTCCAATCACGGGCAGCAGGCCCAGCCGCATCCCTC
GTCTTACTCGAATGCCCCAGTCACCCCGGCATTCTACGCGCACAAGCCCC
CGCAGCCCCTGTACTTTCACCCTCAGCAGCAGCACCAACCAATGCAGGAA
CAGTCACACCAGCTTTCCAACCACTCGCACCCGACACAGCAAGCTTACGT
TCCTCACGGTCAGACTGTGATACCACCCACCCCCAACAGTATCGAACTCC
AAGGAAGTGCCGCTACGCACCCACACCGGACCGATGATAATCATGAGATG
TACGAGCGGTTCACGCGAATGAATGACGAACAGGCCCTTTACACGCCCCT
GGTCTCACCTGCCATGACCCCATTGGAAAGTCAATTCCGCTTCCCTGAAT
ACACCATCCCTGGAGAGTACTTCACCCCTCTCACCTCGCCGGCTCTCGAA
GCCCACACCTCCAATCCCACTGGTTACCCCTTCCACACCGGCCAAATCTC
TGAAATGGGATTTGTGCCCTCCCCGGCCGATAACGCACTCCCTATGTCGT
CAGCCCCCTCCTCGCCGGGTCTGATGCGAAAACATCGGCGCCAGCCTTCG
ACCACCAAGCCCTTCTCCGCTCGCGCTAAAAAGCAACAATCGCCTTCAGT
CCGGCCCCAGGCACGGAAAAAGTCACTTTTGAACATCAACTCGGATGAGG
TCTTGAATAGCTTAAGCCAGGACCAGGGAAGTAGCAAATCGCGCAGTTCT
GGTGGTAGTGGTCTTCGCTACGGAAGTAACGAAAGCTCTGGGCAAGATTC
CGTCTCCCCAGAGCCTCTATCTGAACCACTGATGCCGCCACCTGCTCTTC
CTCCGTCCCGCAAGTCTCCCGCGATTGCCCCTCAGACCAATCAAGTGTCA
CAAGCCAATGAACCCGCAACCCCGGCTTTGCTGATGCGCATTCAACGGTC
CCCGCACAGCAATGCCTCTACTGGCCCGATGGCAACTGTGTCCAGGCCTG
CTCCTTCTGAACCACATGATGATATCATGGAAGATGTTGTCCTTCCAGAA
GCCGCTACCTCGTATGAACCGGTCTCGAGACCTCAAGTGAGCCGCATTGA
CACCACAGTACGGGCGGATTCGGCGTCTTCGACTACTACGCCAGGCAGTG
CCACCCCGGCTATGGAACCCAAGTCTGCTCCAGTGGTCCACAGACCTTCC
AGTTCTATCGCGCCCAGTCCCCGTACTTTGGCTATGCCCTCCCCCAGCGG
ACCGGTACCAAAGAAGTCCGATACTCCGAAATTAGGACCCCTGGGCCGAA
AGCGGCAGAGTCTCAGCTCGTCTCAGCCTAGCCCTAATCTACGTCCCAAG
ATAAGCCCCAGTATACAGCCACTGGTTCGAGGTGATGGAGGGATCACAAG
CGAAACTTCGGCCCTGTACCTTGCGTCAAAGTCGAACTATCAGCATATCT
TAGACGGCACTCTTTTGCCTGGCGTCTCCTACCCTGAAACCTTGGCCGAG
AACCTGAGCTCAAAACGGACGAATCATAAACTCGCAGAGCAGGGACGAAG
GAATCGCATCAACAATGCGCTCAAAGAGATCGAGACTCTTATCCCGACAT
CATTCGTTCAGATAAAGCATGCCAAAGAAGCTGCAATCTGCAACGCCAAG
GGAGGGGATAAGGAGAAGGAGAAAGAAAAGGAAAAGGCCGGAAACCAACC
TATCAGCAAGGCTAGCACTGTGGAGATGGCTATTGATTATATCAAAGCCT
TACAACAGGAACTGGAAGAAACAAAGGGCAAATTAGCAGCCGCTGAAGAG
CGCCTGGGGGAGGGGAAGGGGCTGGGAAAGCGTGATGACAACACAACGAA
CCCTGAAAATGGGAAAACTGCAAATCCCGTTGATGCGGAATCGGCAGCCA
CCAGTCATGAAATAGACAACTCTGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000729-T1.utr5p1 | KJC3_000729-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036638 |
| DBxref | InterPro:IPR011598 |
| DBxref | PFAM:PF00010 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1685904..1689130 + |
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