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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1689746..1692221- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000730-T1 ID=KJC3_000730-T1|Name=KJC3_000730-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2476bp|location=Sequence derived from alignment at ch1:1689746..1692221- (Aspergillus niger KJC3)
AAAATTAATGCCTCAGGCTCATAATCACCATGACATTTTGCAGATCGCGC
GCTTCCTCTCCTCCGATTGCCGAAAAAAAGTATCCCCCCATCTTGATCTT
CGTTGCTCCGGCTTCTCTATCTCGCGCTTGTCGTTCCCTTCTGGCACTTT
AACCTCATGCGATTCCCCCGGTGACCCTTCCCCTCCTTCTAGAGAATTGA
AGCTTTTCGCATTCTCTAGAAGCCATTCATCATGACTTCTCAAGTATGCG
ATCAATTCCCCCTCCCCTCTCTTCCCGCCCCTCATCTGTACCACTGCTAA
TGATCCGAGTAACAGTACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGA
TAATTTCGGGGAGCTTTTTGCGGTATGCTCGCTTTTGCTCACTTGGTAAC
CCGCTGCATTCATGAAGAACCATATAGTCGGTGTCAATTTGCGGGCCACA
TCGAGCAACAGGCTGACCGTTATCCGTCTTCGCCAGCGTATCTTCTCAAC
CCTCCAGCGCTATGACCGGCTCTCATTACCTCGTTTAAAATTCTACTCGC
GCCTCTCCGATCGTCAACTTCGTCATGGTCTATCTGCCATGATTCAACAC
CACCTGGTGTACCATTACACATCCTACGACGATGGCGTTACCTATTACGA
ACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCTCCGGCAAGATCCTGG
AGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCTACCCTTATGGAGACC
ATTATGTTTCTCGGACACGCACAAGTCGGCTACCTCGAGACCCTCCCTGA
ACTGCAACCCGCACCACCTAAAGCGAATGGCGTGAAACAGGAAGCCGAAG
GTGGAGAGTCCGAAGAACAAATGAATGGCGATGATGTGCACACCTCCGAC
CAGCCGGCGCTTCTACATCCTACTCTGAAAGCACTGGCTTCCCACGGTTA
TATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCTACGCTGATAACGCCC
TGGATGCGGAACGTGCCATCAAGTCGCGACCTGATGTCAAGCAGCTAAAG
GGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGACTGTTACTCTTTTGAA
AGAAAGACTTGATGGGGATCTTACCCGCGGACTCATGCATAACGGGTTAC
CCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGCAGATGCTACAAAC
AAAAAAGCACGAATGGACTACGTCGATGCTGATGAGGATGAGGATGAGGA
GGAGAACGAATGGTCGGATGACGAGATGGGTGGGGATACCACTCCCATGG
AGGTGAGACTCTGCGTTATTCTCCTTTATATGTCTGTTTGACTAATGGGT
TTGTTCAATCTAGTTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCG
ACGTTGCTCTTCGGAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCA
TCGCCAGTTACCGCACAGGTCTACGAGGGCCTCCTACGACGCATAGAATA
CCAAACCAAACAATGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGG
AAGGCGAGCAATACTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAA
GTCGACCCGCAGTTGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATC
ACAGGCCATCAACAAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATG
GAACCGACCGTGAAGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGAC
CAACACCTTTCTCTGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCG
CGTACTTTCCGGACTCATTACCTGGACCGTCGAATTCCGACACCTAGCGC
GCAAGCTCCGCCACCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGC
GACGTCGCTTTACGAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGA
CGAGAAGCGCCTACAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTC
AAGTCCTCGCTAGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTC
CCCCGAGACGCACAGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTA
TGATCCGGACCGCATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTA
TGTCTAGGTGTATGCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAG
TTCCTGGAGAAGACGGAGCGGAGTGATGTCAAGGGCAATGAGGAGCGCTA
TCTGTCTCAGGCTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGG
CCTTGTTGCTTGGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATG
CGAGACTACTGATGGGAATGATTGATCGCATTCCTTTTACTCTTCTATTC
ATGGAATATGATGTTTGAAAAGATTCCACATATCAATACTGTATGTCTCA
GACATGCAAATTATATACGCCTAGAT back to topCoding sequence (CDS) from alignment at ch1:1689746..1692221- >KJC3_000730-T1 ID=KJC3_000730-T1|Name=KJC3_000730-T1|organism=Aspergillus niger KJC3|type=CDS|length=7536bp|location=Sequence derived from alignment at ch1:1689746..1692221- (Aspergillus niger KJC3)
TTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCGACGTTGCTCTTCG
GAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCATCGCCAGTTACCG
CACAGGTCTACGAGGGCCTCCTACGACGCATAGAATACCAAACCAAACAA
TGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGGAAGGCGAGCAATA
CTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAAGTCGACCCGCAGT
TGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATCACAGGCCATCAAC
AAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATGGAACCGACCGTGA
AGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGACCAACACCTTTCTC
TGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCGCGTACTTTCCGGA
CTCATTACCTGGACCGTCGAATTCCGACACCTAGCGCGCAAGCTCCGCCA
CCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGCGACGTCGCTTTAC
GAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGACGAGAAGCGCCTA
CAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTCAAGTCCTCGCTAG
CATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTCCCCCGAGACGCAC
AGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTATGATCCGGACCGC
ATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTATGTCTAGGTGTAT
GCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAGTTCCTGGAGAAGA
CGGAGCGGAGTGATGTCAAGGGCAATGAGGAGCGCTATCTGTCTCAGGCT
GAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGG
GGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATGCGAGACTACTGAC
GTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCTCGTTTA
AAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCTATCTGC
CATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACGATGGCG
TTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCTCC
GGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCTAC
CCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCTACCTCG
AGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGCGTGAAA
CAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGATGATGT
GCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAGCACTGG
CTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCTAC
GCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACCTGATGT
CAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGACTG
TTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGACTCATG
CATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGC
AGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTGATGAGG
ATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGTGGGGAT
ACCACTCCCATGGAGTACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGA
TAATTTCGGGGAGCTTTTTGCGATGACTTCTCAATTGGCAATTGTTGTCC
GCGTGAACTATGAGAAACTCGACGTTGCTCTTCGGAATCGACGGTTTTTG
GATCTTGCGGAGATGAACTCATCGCCAGTTACCGCACAGGTCTACGAGGG
CCTCCTACGACGCATAGAATACCAAACCAAACAATGCCGAGATAGTGCTG
AGATACCCCGCGAAGGAGAGGAAGGCGAGCAATACTCCGTCCCCATCGCT
CTTAGTGCGGTGACAGAAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTC
CATAGGTCCCATGGAGATATCACAGGCCATCAACAAACGTGGGAAACGGC
CTCTGGAGGACAGTGTCAATGGAACCGACCGTGAAGGATCAGAAGCCCCC
AGCCGCACCTACGAGGTAGACCAACACCTTTCTCTGCTCTCGCAGCCCCC
CTACAACCTCACATCCAAGCGCGTACTTTCCGGACTCATTACCTGGACCG
TCGAATTCCGACACCTAGCGCGCAAGCTCCGCCACCTAGAACTGGAACGA
ATGATTGAAGCCCGCTATGGCGACGTCGCTTTACGAGTGATCCGCGTACT
CCACGCCAAGGGCAAGCTCGACGAGAAGCGCCTACAGGAAATCAGTCTCC
TCCCCTTCAAAGACCTGCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGG
TTTGTGGATCTGCAAGAAGTCCCCCGAGACGCACAGCGACAGCCCTCTCG
TACGATCTACCTCTGGTACTATGATCCGGACCGCATCCGGAGCAGCATTC
TGGAGGACACGTACAAGGCTATGTCTAGGTGTATGCAACGCCTGCGGTTT
GAGCGGAACCGACTCAAGGAGTTCCTGGAGAAGACGGAGCGGAGTGATGT
CAAGGGCAATGAGGAGCGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGG
AGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTG
GATGAGATGGTTGCGGTCATGCGAGACTACTGACGTATCTTCTCAACCCT
CCAGCGCTATGACCGGCTCTCATTACCTCGTTTAAAATTCTACTCGCGCC
TCTCCGATCGTCAACTTCGTCATGGTCTATCTGCCATGATTCAACACCAC
CTGGTGTACCATTACACATCCTACGACGATGGCGTTACCTATTACGAACC
AAACCTGCAGGCTGCGTACTATCTTGTTCGCTCCGGCAAGATCCTGGAGT
TCATCGAAGAACGGCTTGGGAAGTATGCGGCTACCCTTATGGAGACCATT
ATGTTTCTCGGACACGCACAAGTCGGCTACCTCGAGACCCTCCCTGAACT
GCAACCCGCACCACCTAAAGCGAATGGCGTGAAACAGGAAGCCGAAGGTG
GAGAGTCCGAAGAACAAATGAATGGCGATGATGTGCACACCTCCGACCAG
CCGGCGCTTCTACATCCTACTCTGAAAGCACTGGCTTCCCACGGTTATAT
CTTTCGTGTGCGCGATGCGCAATTCCAAAGCTACGCTGATAACGCCCTGG
ATGCGGAACGTGCCATCAAGTCGCGACCTGATGTCAAGCAGCTAAAGGGT
AAGAAGCTGGACGAAACAGTCCTGGAAGGGACTGTTACTCTTTTGAAAGA
AAGACTTGATGGGGATCTTACCCGCGGACTCATGCATAACGGGTTACCCC
GGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGCAGATGCTACAAACAAA
AAAGCACGAATGGACTACGTCGATGCTGATGAGGATGAGGATGAGGAGGA
GAACGAATGGTCGGATGACGAGATGGGTGGGGATACCACTCCCATGGAGT
ACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGATAATTTCGGGGAGCTT
TTTGCGATGACTTCTCAATTGGCAATTGTTGTCCGCGTGAACTATGAGAA
ACTCGACGTTGCTCTTCGGAATCGACGGTTTTTGGATCTTGCGGAGATGA
ACTCATCGCCAGTTACCGCACAGGTCTACGAGGGCCTCCTACGACGCATA
GAATACCAAACCAAACAATGCCGAGATAGTGCTGAGATACCCCGCGAAGG
AGAGGAAGGCGAGCAATACTCCGTCCCCATCGCTCTTAGTGCGGTGACAG
AAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTCCATAGGTCCCATGGAG
ATATCACAGGCCATCAACAAACGTGGGAAACGGCCTCTGGAGGACAGTGT
CAATGGAACCGACCGTGAAGGATCAGAAGCCCCCAGCCGCACCTACGAGG
TAGACCAACACCTTTCTCTGCTCTCGCAGCCCCCCTACAACCTCACATCC
AAGCGCGTACTTTCCGGACTCATTACCTGGACCGTCGAATTCCGACACCT
AGCGCGCAAGCTCCGCCACCTAGAACTGGAACGAATGATTGAAGCCCGCT
ATGGCGACGTCGCTTTACGAGTGATCCGCGTACTCCACGCCAAGGGCAAG
CTCGACGAGAAGCGCCTACAGGAAATCAGTCTCCTCCCCTTCAAAGACCT
GCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAG
AAGTCCCCCGAGACGCACAGCGACAGCCCTCTCGTACGATCTACCTCTGG
TACTATGATCCGGACCGCATCCGGAGCAGCATTCTGGAGGACACGTACAA
GGCTATGTCTAGGTGTATGCAACGCCTGCGGTTTGAGCGGAACCGACTCA
AGGAGTTCCTGGAGAAGACGGAGCGGAGTGATGTCAAGGGCAATGAGGAG
CGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAA
AGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGG
TCATGCGAGACTACTGACGTATCTTCTCAACCCTCCAGCGCTATGACCGG
CTCTCATTACCTCGTTTAAAATTCTACTCGCGCCTCTCCGATCGTCAACT
TCGTCATGGTCTATCTGCCATGATTCAACACCACCTGGTGTACCATTACA
CATCCTACGACGATGGCGTTACCTATTACGAACCAAACCTGCAGGCTGCG
TACTATCTTGTTCGCTCCGGCAAGATCCTGGAGTTCATCGAAGAACGGCT
TGGGAAGTATGCGGCTACCCTTATGGAGACCATTATGTTTCTCGGACACG
CACAAGTCGGCTACCTCGAGACCCTCCCTGAACTGCAACCCGCACCACCT
AAAGCGAATGGCGTGAAACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACA
AATGAATGGCGATGATGTGCACACCTCCGACCAGCCGGCGCTTCTACATC
CTACTCTGAAAGCACTGGCTTCCCACGGTTATATCTTTCGTGTGCGCGAT
GCGCAATTCCAAAGCTACGCTGATAACGCCCTGGATGCGGAACGTGCCAT
CAAGTCGCGACCTGATGTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAA
CAGTCCTGGAAGGGACTGTTACTCTTTTGAAAGAAAGACTTGATGGGGAT
CTTACCCGCGGACTCATGCATAACGGGTTACCCCGGGGTGCGAAGAGAAG
GCATGGTACCGGGTCTGCAGATGCTACAAACAAAAAAGCACGAATGGACT
ACGTCGATGCTGATGAGGATGAGGATGAGGAGGAGAACGAATGGTCGGAT
GACGAGATGGGTGGGGATACCACTCCCATGGAGTACGCGGCGGAGCTATG
TGCGCTCTTGGTCGAGGATAATTTCGGGGAGCTTTTTGCGATGACTTCTC
AATTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCGACGTTGCTCTT
CGGAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCATCGCCAGTTAC
CGCACAGGTCTACGAGGGCCTCCTACGACGCATAGAATACCAAACCAAAC
AATGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGGAAGGCGAGCAA
TACTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAAGTCGACCCGCA
GTTGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATCACAGGCCATCA
ACAAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATGGAACCGACCGT
GAAGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGACCAACACCTTTC
TCTGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCGCGTACTTTCCG
GACTCATTACCTGGACCGTCGAATTCCGACACCTAGCGCGCAAGCTCCGC
CACCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGCGACGTCGCTTT
ACGAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGACGAGAAGCGCC
TACAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTCAAGTCCTCGCT
AGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTCCCCCGAGACGC
ACAGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTATGATCCGGACC
GCATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTATGTCTAGGTGT
ATGCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAGTTCCTGGAGAA
GACGGAGCGGAGTGATGTCAAGGGCAATGAGGAGCGCTATCTGTCTCAGG
CTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTT
GGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATGCGAGACTACTG
ACGTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCTCGTT
TAAAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCTATCT
GCCATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACGATGG
CGTTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCT
CCGGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCT
ACCCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCTACCT
CGAGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGCGTGA
AACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGATGAT
GTGCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAGCACT
GGCTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCT
ACGCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACCTGAT
GTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGAC
TGTTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGACTCA
TGCATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCT
GCAGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTGATGA
GGATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGTGGGG
ATACCACTCCCATGGAGTACGCGGCGGAGCTATGTGCGCTCTTGGTCGAG
GATAATTTCGGGGAGCTTTTTGCGATGACTTCTCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000730-T1.utr3p1 | KJC3_000730-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000730-T1.utr5p1 | KJC3_000730-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092610QT |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR008806 |
| DBxref | InterPro:IPR013197 |
| DBxref | InterPro:IPR036388 |
| DBxref | PFAM:PF05645 |
| DBxref | PFAM:PF08221 |
| Product | RNA polymerase III subunit C82 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1689746..1692221 - |
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