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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1689746..1692221- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000730-T3 ID=KJC3_000730-T3|Name=KJC3_000730-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2476bp|location=Sequence derived from alignment at ch1:1689746..1692221- (Aspergillus niger KJC3)
AAAATTAATGCCTCAGGCTCATAATCACCATGACATTTTGCAGATCGCGC
GCTTCCTCTCCTCCGATTGCCGAAAAAAAGTATCCCCCCATCTTGATCTT
CGTTGCTCCGGCTTCTCTATCTCGCGCTTGTCGTTCCCTTCTGGCACTTT
AACCTCATGCGATTCCCCCGGTGACCCTTCCCCTCCTTCTAGAGAATTGA
AGCTTTTCGCATTCTCTAGAAGCCATTCATCATGACTTCTCAAGTATGCG
ATCAATTCCCCCTCCCCTCTCTTCCCGCCCCTCATCTGTACCACTGCTAA
TGATCCGAGTAACAGTACGCGGCGGAGCTATGTGCGCTCTTGGTCGAGGA
TAATTTCGGGGAGCTTTTTGCGGTATGCTCGCTTTTGCTCACTTGGTAAC
CCGCTGCATTCATGAAGAACCATATAGTCGGTGTCAATTTGCGGGCCACA
TCGAGCAACAGGCTGACCGTTATCCGTCTTCGCCAGCGTATCTTCTCAAC
CCTCCAGCGCTATGACCGGCTCTCATTACCTCGTTTAAAATTCTACTCGC
GCCTCTCCGATCGTCAACTTCGTCATGGTCTATCTGCCATGATTCAACAC
CACCTGGTGTACCATTACACATCCTACGACGATGGCGTTACCTATTACGA
ACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCTCCGGCAAGATCCTGG
AGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCTACCCTTATGGAGACC
ATTATGTTTCTCGGACACGCACAAGTCGGCTACCTCGAGACCCTCCCTGA
ACTGCAACCCGCACCACCTAAAGCGAATGGCGTGAAACAGGAAGCCGAAG
GTGGAGAGTCCGAAGAACAAATGAATGGCGATGATGTGCACACCTCCGAC
CAGCCGGCGCTTCTACATCCTACTCTGAAAGCACTGGCTTCCCACGGTTA
TATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCTACGCTGATAACGCCC
TGGATGCGGAACGTGCCATCAAGTCGCGACCTGATGTCAAGCAGCTAAAG
GGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGACTGTTACTCTTTTGAA
AGAAAGACTTGATGGGGATCTTACCCGCGGACTCATGCATAACGGGTTAC
CCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGCAGATGCTACAAAC
AAAAAAGCACGAATGGACTACGTCGATGCTGATGAGGATGAGGATGAGGA
GGAGAACGAATGGTCGGATGACGAGATGGGTGGGGATACCACTCCCATGG
AGGTGAGACTCTGCGTTATTCTCCTTTATATGTCTGTTTGACTAATGGGT
TTGTTCAATCTAGTTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCG
ACGTTGCTCTTCGGAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCA
TCGCCAGTTACCGCACAGGTCTACGAGGGCCTCCTACGACGCATAGAATA
CCAAACCAAACAATGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGG
AAGGCGAGCAATACTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAA
GTCGACCCGCAGTTGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATC
ACAGGCCATCAACAAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATG
GAACCGACCGTGAAGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGAC
CAACACCTTTCTCTGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCG
CGTACTTTCCGGACTCATTACCTGGACCGTCGAATTCCGACACCTAGCGC
GCAAGCTCCGCCACCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGC
GACGTCGCTTTACGAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGA
CGAGAAGCGCCTACAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTC
AAGTCCTCGCTAGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTC
CCCCGAGACGCACAGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTA
TGATCCGGACCGCATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTA
TGTCTAGGTGTATGCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAG
TTCCTGGAGAAGACGGAGCGGAGTGATGTCAAGGGCAATGAGGAGCGCTA
TCTGTCTCAGGCTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGG
CCTTGTTGCTTGGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATG
CGAGACTACTGATGGGAATGATTGATCGCATTCCTTTTACTCTTCTATTC
ATGGAATATGATGTTTGAAAAGATTCCACATATCAATACTGTATGTCTCA
GACATGCAAATTATATACGCCTAGAT back to topCoding sequence (CDS) from alignment at ch1:1689746..1692221- >KJC3_000730-T3 ID=KJC3_000730-T3|Name=KJC3_000730-T3|organism=Aspergillus niger KJC3|type=CDS|length=5490bp|location=Sequence derived from alignment at ch1:1689746..1692221- (Aspergillus niger KJC3)
TTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCGACGTTGCTCTTCG
GAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCATCGCCAGTTACCG
CACAGGTCTACGAGGGCCTCCTACGACGCATAGAATACCAAACCAAACAA
TGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGGAAGGCGAGCAATA
CTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAAGTCGACCCGCAGT
TGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATCACAGGCCATCAAC
AAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATGGAACCGACCGTGA
AGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGACCAACACCTTTCTC
TGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCGCGTACTTTCCGGA
CTCATTACCTGGACCGTCGAATTCCGACACCTAGCGCGCAAGCTCCGCCA
CCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGCGACGTCGCTTTAC
GAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGACGAGAAGCGCCTA
CAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTCAAGTCCTCGCTAG
CATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTCCCCCGAGACGCAC
AGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTATGATCCGGACCGC
ATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTATGTCTAGGTGTAT
GCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAGTTCCTGGAGAAGA
CGGAGCGGAGTGATGTCAAGGGCAATGAGGAGCGCTATCTGTCTCAGGCT
GAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGGCCTTGTTGCTTGG
GGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATGCGAGACTACTGAC
GTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATTACCTCGTTTA
AAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATGGTCTATCTGC
CATGATTCAACACCACCTGGTGTACCATTACACATCCTACGACGATGGCG
TTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCTTGTTCGCTCC
GGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGTATGCGGCTAC
CCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTCGGCTACCTCG
AGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAATGGCGTGAAA
CAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATGGCGATGATGT
GCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTGAAAGCACTGG
CTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATTCCAAAGCTAC
GCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGCGACCTGATGT
CAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTGGAAGGGACTG
TTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCGCGGACTCATG
CATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTACCGGGTCTGC
AGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGATGCTGATGAGG
ATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGATGGGTGGGGAT
ACCACTCCCATGGAGATGAAGAACCATATATTGGCAATTGTTGTCCGCGT
GAACTATGAGAAACTCGACGTTGCTCTTCGGAATCGACGGTTTTTGGATC
TTGCGGAGATGAACTCATCGCCAGTTACCGCACAGGTCTACGAGGGCCTC
CTACGACGCATAGAATACCAAACCAAACAATGCCGAGATAGTGCTGAGAT
ACCCCGCGAAGGAGAGGAAGGCGAGCAATACTCCGTCCCCATCGCTCTTA
GTGCGGTGACAGAAGAAGTCGACCCGCAGTTGGACCTTGCAGGCTCCATA
GGTCCCATGGAGATATCACAGGCCATCAACAAACGTGGGAAACGGCCTCT
GGAGGACAGTGTCAATGGAACCGACCGTGAAGGATCAGAAGCCCCCAGCC
GCACCTACGAGGTAGACCAACACCTTTCTCTGCTCTCGCAGCCCCCCTAC
AACCTCACATCCAAGCGCGTACTTTCCGGACTCATTACCTGGACCGTCGA
ATTCCGACACCTAGCGCGCAAGCTCCGCCACCTAGAACTGGAACGAATGA
TTGAAGCCCGCTATGGCGACGTCGCTTTACGAGTGATCCGCGTACTCCAC
GCCAAGGGCAAGCTCGACGAGAAGCGCCTACAGGAAATCAGTCTCCTCCC
CTTCAAAGACCTGCGTCAAGTCCTCGCTAGCATGCAGTCCGGTGGGTTTG
TGGATCTGCAAGAAGTCCCCCGAGACGCACAGCGACAGCCCTCTCGTACG
ATCTACCTCTGGTACTATGATCCGGACCGCATCCGGAGCAGCATTCTGGA
GGACACGTACAAGGCTATGTCTAGGTGTATGCAACGCCTGCGGTTTGAGC
GGAACCGACTCAAGGAGTTCCTGGAGAAGACGGAGCGGAGTGATGTCAAG
GGCAATGAGGAGCGCTATCTGTCTCAGGCTGAGTTGACCCTGTTGGAGCA
GTGGAAGGCTAAAGAGGCCTTGTTGCTTGGGGAGGTGGCTCGGTTGGATG
AGATGGTTGCGGTCATGCGAGACTACTGACGTATCTTCTCAACCCTCCAG
CGCTATGACCGGCTCTCATTACCTCGTTTAAAATTCTACTCGCGCCTCTC
CGATCGTCAACTTCGTCATGGTCTATCTGCCATGATTCAACACCACCTGG
TGTACCATTACACATCCTACGACGATGGCGTTACCTATTACGAACCAAAC
CTGCAGGCTGCGTACTATCTTGTTCGCTCCGGCAAGATCCTGGAGTTCAT
CGAAGAACGGCTTGGGAAGTATGCGGCTACCCTTATGGAGACCATTATGT
TTCTCGGACACGCACAAGTCGGCTACCTCGAGACCCTCCCTGAACTGCAA
CCCGCACCACCTAAAGCGAATGGCGTGAAACAGGAAGCCGAAGGTGGAGA
GTCCGAAGAACAAATGAATGGCGATGATGTGCACACCTCCGACCAGCCGG
CGCTTCTACATCCTACTCTGAAAGCACTGGCTTCCCACGGTTATATCTTT
CGTGTGCGCGATGCGCAATTCCAAAGCTACGCTGATAACGCCCTGGATGC
GGAACGTGCCATCAAGTCGCGACCTGATGTCAAGCAGCTAAAGGGTAAGA
AGCTGGACGAAACAGTCCTGGAAGGGACTGTTACTCTTTTGAAAGAAAGA
CTTGATGGGGATCTTACCCGCGGACTCATGCATAACGGGTTACCCCGGGG
TGCGAAGAGAAGGCATGGTACCGGGTCTGCAGATGCTACAAACAAAAAAG
CACGAATGGACTACGTCGATGCTGATGAGGATGAGGATGAGGAGGAGAAC
GAATGGTCGGATGACGAGATGGGTGGGGATACCACTCCCATGGAGATGAA
GAACCATATATTGGCAATTGTTGTCCGCGTGAACTATGAGAAACTCGACG
TTGCTCTTCGGAATCGACGGTTTTTGGATCTTGCGGAGATGAACTCATCG
CCAGTTACCGCACAGGTCTACGAGGGCCTCCTACGACGCATAGAATACCA
AACCAAACAATGCCGAGATAGTGCTGAGATACCCCGCGAAGGAGAGGAAG
GCGAGCAATACTCCGTCCCCATCGCTCTTAGTGCGGTGACAGAAGAAGTC
GACCCGCAGTTGGACCTTGCAGGCTCCATAGGTCCCATGGAGATATCACA
GGCCATCAACAAACGTGGGAAACGGCCTCTGGAGGACAGTGTCAATGGAA
CCGACCGTGAAGGATCAGAAGCCCCCAGCCGCACCTACGAGGTAGACCAA
CACCTTTCTCTGCTCTCGCAGCCCCCCTACAACCTCACATCCAAGCGCGT
ACTTTCCGGACTCATTACCTGGACCGTCGAATTCCGACACCTAGCGCGCA
AGCTCCGCCACCTAGAACTGGAACGAATGATTGAAGCCCGCTATGGCGAC
GTCGCTTTACGAGTGATCCGCGTACTCCACGCCAAGGGCAAGCTCGACGA
GAAGCGCCTACAGGAAATCAGTCTCCTCCCCTTCAAAGACCTGCGTCAAG
TCCTCGCTAGCATGCAGTCCGGTGGGTTTGTGGATCTGCAAGAAGTCCCC
CGAGACGCACAGCGACAGCCCTCTCGTACGATCTACCTCTGGTACTATGA
TCCGGACCGCATCCGGAGCAGCATTCTGGAGGACACGTACAAGGCTATGT
CTAGGTGTATGCAACGCCTGCGGTTTGAGCGGAACCGACTCAAGGAGTTC
CTGGAGAAGACGGAGCGGAGTGATGTCAAGGGCAATGAGGAGCGCTATCT
GTCTCAGGCTGAGTTGACCCTGTTGGAGCAGTGGAAGGCTAAAGAGGCCT
TGTTGCTTGGGGAGGTGGCTCGGTTGGATGAGATGGTTGCGGTCATGCGA
GACTACTGACGTATCTTCTCAACCCTCCAGCGCTATGACCGGCTCTCATT
ACCTCGTTTAAAATTCTACTCGCGCCTCTCCGATCGTCAACTTCGTCATG
GTCTATCTGCCATGATTCAACACCACCTGGTGTACCATTACACATCCTAC
GACGATGGCGTTACCTATTACGAACCAAACCTGCAGGCTGCGTACTATCT
TGTTCGCTCCGGCAAGATCCTGGAGTTCATCGAAGAACGGCTTGGGAAGT
ATGCGGCTACCCTTATGGAGACCATTATGTTTCTCGGACACGCACAAGTC
GGCTACCTCGAGACCCTCCCTGAACTGCAACCCGCACCACCTAAAGCGAA
TGGCGTGAAACAGGAAGCCGAAGGTGGAGAGTCCGAAGAACAAATGAATG
GCGATGATGTGCACACCTCCGACCAGCCGGCGCTTCTACATCCTACTCTG
AAAGCACTGGCTTCCCACGGTTATATCTTTCGTGTGCGCGATGCGCAATT
CCAAAGCTACGCTGATAACGCCCTGGATGCGGAACGTGCCATCAAGTCGC
GACCTGATGTCAAGCAGCTAAAGGGTAAGAAGCTGGACGAAACAGTCCTG
GAAGGGACTGTTACTCTTTTGAAAGAAAGACTTGATGGGGATCTTACCCG
CGGACTCATGCATAACGGGTTACCCCGGGGTGCGAAGAGAAGGCATGGTA
CCGGGTCTGCAGATGCTACAAACAAAAAAGCACGAATGGACTACGTCGAT
GCTGATGAGGATGAGGATGAGGAGGAGAACGAATGGTCGGATGACGAGAT
GGGTGGGGATACCACTCCCATGGAGATGAAGAACCATATA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000730-T3.utr3p1 | KJC3_000730-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR008806 |
| DBxref | InterPro:IPR036388 |
| DBxref | PFAM:PF05645 |
| Product | variant 3 |
| Product | RNA polymerase III subunit C82 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1689746..1692221 - |
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