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KJC3_000732-T1, KJC3_000732-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000732-T1
Unique NameKJC3_000732-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1695466..1698037-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000732-T1 ID=KJC3_000732-T1|Name=KJC3_000732-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2572bp|location=Sequence derived from alignment at ch1:1695466..1698037- (Aspergillus niger KJC3)
CTGCAATTGGGAGAAAAAAACCACCATCTGAATCGATAGGTACGTATGCT
CTGCCTGGAAGCCCGTCCCACCCCCTCGTTGATCCTTCTTATATTTTCAT
ACCTCTCTTCTCTTTTCCCTCCTCTTCTCTCCTTCATCTTCTTCCCTCTT
CTTCATCCATACATACATACTTCCTGCTCCTACCGTACATATACTCAAAC
CTTCCCCCGGAGCTACCTGCTTACTTGGCCTGTCCTCCTCACCAGTGACT
TCTCCATCCGAACAACAAAACCGCTCTTCCCTACTCTCAACCCATTTCGC
TCTGGTCGTTCGTCCTTGACGTTCCGGACCTGCAGACTATCTTTCGATTC
TTCGTGATCCCTTAAGGCGACGAAGCCCCCAGATTTCCCTTGGTCAGGGC
CCCTTTCAGCGCTCCCAAGGTCAGACATGTCTACCGCTACTGCCGCGACG
GCCGCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAA
CCTGCTACGTATGTAATCTCTGCTGCAACCCCCGGACGGTTAGCTTTTGA
GGGAAACTGGTTCTGATGGCATATGTTACAGTGGGTGCTGGATTGAACCT
CTTCGAGTATGTTTTCCCTTCTCACCTGCTCCCAATCTATGCACCGTGCG
TTTCCCTAACTAACATGGAATAGGGTCACCACTTTGGGTCAGGTACGAAG
CAATAACCGAGGCGGCAATTGTCGGCTTATGCTAACTCAGTTCCTATAGC
CGCTGGAAGTGATCAAGACGACCATGGCTGCAAACCGGGGCGATAGCTTC
GCTGGTGCTATGGGTCGAATTTGGGGCCGTGGCGGGATCCTCGGTTGTAA
GTGCTCCTTCCGCCTTGTTCGCTTTTTCCGACTAGTGTGGGGTGGCATTG
TCTGACACTAGTCACCTACTTTAGATTATCAAGGTCTCATTCCGTGGGCC
TGGATTGAGGCCTCCACTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGA
GGCGGAATTCCGTGCCAAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTA
TCGCTGGAGGTATGGTCGGTGGTATTGCACAGGCATACGCGACCATGGGC
TTCTGTACCTGCATGAAGACAGTCGAGATCACCAAGCATAAGATGGCCGC
CCAGGGCGTCAAGCCCCCCAGCACCTTCGCGACTTTCATGGATATCTACC
GCAAGGAGGGCATTCGTGGTATCAACCGTGGTGTCAACGCCGTTGCCATT
CGCCAGACCACCAACTGGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGA
AACCGCTATTCGCAGGGTCACCAACAAGGAGGAGGGTCAGAAGCTCAATG
CATTTGAGAAGATCCTGGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGG
AACCAGCCCATTGAGGTGATCCGTGTCGAGATGCAGAGCAAGACTGATGA
CCCCAACCGCCCCAAGAACCTTACCGTGGGCAAGGCCGCCAAGTACATCT
ACGACAACAACGGCATCAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTG
GGTCTGGGAATCTGGCAGACCGTCTGCATGGTGGCACTTGGTGACATGTA
AGTGGAACAAACTTTCCCCTCTCTTGCATTATCAATACCCCGGGCGGAGC
ACTTCCTATGGGGGTGGCGCCCCGATCTTCATGTGATAACCGAGGAGTGA
ACTGGAGCTAACGTGTGGGTCTCCGTTACCCCGAACAGGGCCAAGGAAGC
AGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAGCACTAGAGAAGGT
CTGAGATACCCTTCTGCCATGCGCAGTCTCGGTCGGAGGAGCGGATGCTA
GATAATCTTACCCATATGGTGTGGAACTTGCTCGGTCCGTAGCTAGCTAT
GCATAGTGCCGAGCATGCCGCAAGAAAGTATTATGAAACCAAACTACCTT
AGCATAATAATGTTAATATATTTCATTTACCATGAGGCCGGCCATTCATG
ACCATATGTTGGCTTTCCATCGGAGAAATACGCACCCACAGTTGCCCAGC
TGTGTTCTGACACCGTTAATTTGTTTGTTATGCTTTTTCCCTATTCATCA
TATTTACACATCCCGTGTTACCGAGGAAGGACGGAGTGGAATAGATACAA
CAGCAGAGCCAGCCACCACATACCTAGGTAAATTCACAAGCTCGCTACTA
TCTACCTACCGAGTAGTCACCTCTGGCGTAAAAGCCCATCCTACCTGTTT
GCGGCTGAGGAATGACAGTCTCTAATCAGCCAACGGCTCCTTCGGAATGT
GCGCAAGTCCTCCCCCCTTCCCACACAGCTACCGAGACAGTAGGTACCGG
GCCATTCATTGAACGAAAGTGAAAATTACTCCGTCCGTCCGTCATCTGTC
ATATTGTGCGGGTTTTATCTCTTCCAAACCCCGATTTCCAGAGCCGGCTG
GCTGACATACCGACAGCCTTACCATCCCACCATCTTACTAGAGCATAGTA
TAAACTAGTATGCACGTATTCACAATACGGATCTTTCCCCCCCTCTCGAA
ACAAAAATTTCCGCGTTTTCCG
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Coding sequence (CDS) from alignment at ch1:1695466..1698037-

>KJC3_000732-T1 ID=KJC3_000732-T1|Name=KJC3_000732-T1|organism=Aspergillus niger KJC3|type=CDS|length=5706bp|location=Sequence derived from alignment at ch1:1695466..1698037- (Aspergillus niger KJC3)
GGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAGC
ACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCACTA
AGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCAAG
GTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTCGG
TGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAAGA
CAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCCCC
AGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGTGG
TATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTGGG
GATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGGTC
ACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTGGC
TTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGTGA
TCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGAAC
CTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATCAA
GGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCAGA
CCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGACGA
CCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAATT
TGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGGTG
CTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGCCA
CTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGCTA
CGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAG
CACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCACT
AAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCAA
GGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTCG
GTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAAG
ACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCCC
CAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGTG
GTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTGG
GGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGGT
CACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTGG
CTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGTG
ATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGAA
CCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATCA
AGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCAG
ACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGACG
ACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAAT
TTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGGT
GCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGCC
ACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGCT
ACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAA
GCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCAC
TAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCA
AGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTC
GGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAA
GACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCC
CCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGT
GGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTG
GGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGG
TCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTG
GCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGT
GATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGA
ACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATC
AAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCA
GACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGAC
GACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAA
TTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGG
TGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGC
CACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGC
TACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTA
AGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCA
CTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCC
AAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGT
CGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGA
AGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCC
CCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCG
TGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACT
GGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGG
GTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCT
GGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGG
TGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAG
AACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCAT
CAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGC
AGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGA
CGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGA
ATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGG
GTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCG
CCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTG
CTACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCT
AAGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCC
ACTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGC
CAAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGG
TCGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATG
AAGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCC
CCCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTC
GTGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAAC
TGGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAG
GGTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCC
TGGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAG
GTGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAA
GAACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCA
TCAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGG
CAGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAG
ACGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCG
AATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTG
GGTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCC
GCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCT
GCTACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGC
TAAGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTC
CACTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTG
CCAAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATG
GTCGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCAT
GAAGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGC
CCCCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATT
CGTGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAA
CTGGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCA
GGGTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATC
CTGGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGA
GGTGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCA
AGAACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGC
ATCAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTG
GCAGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAA
GACGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTC
GAATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGT
GGGTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGC
CGCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACC
TGCTAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YHM2KJC3_000732Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000732-T1KJC3_000732-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000732-T1.cdsKJC3_000732-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000732-T1.utr3p2KJC3_000732-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_000732-T1.utr3p1KJC3_000732-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000732-T1.exon7KJC3_000732-T1.exon7Aspergillus niger KJC3exon
KJC3_000732-T1.exon6KJC3_000732-T1.exon6Aspergillus niger KJC3exon
KJC3_000732-T1.exon5KJC3_000732-T1.exon5Aspergillus niger KJC3exon
KJC3_000732-T1.exon4KJC3_000732-T1.exon4Aspergillus niger KJC3exon
KJC3_000732-T1.exon3KJC3_000732-T1.exon3Aspergillus niger KJC3exon
KJC3_000732-T1.exon2KJC3_000732-T1.exon2Aspergillus niger KJC3exon
KJC3_000732-T1.exon1KJC3_000732-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000732-T1.utr5p1KJC3_000732-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263HD8
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR023395
DBxrefPFAM:PF00153
ProductMitochondrial DNA replication protein yhm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1695466..1698037 -
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