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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1710967..1711618+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000736-T1 ID=KJC3_000736-T1|Name=KJC3_000736-T1|organism=Aspergillus niger KJC3|type=mRNA|length=652bp|location=Sequence derived from alignment at ch1:1710967..1711618+ (Aspergillus niger KJC3)
ATGGCTGTGAATTTTCCATGGATCTACCCTGTTCGGGTAATCCAGGCCAT
CTTCGGAATAATCGTCCTTGCTTTAACCGCATACTGTTCGTCAAGTCATT
CCATCACACTTCAAAGAAGAACTGAAAATAGCTGACATATGACAAGATAT
CAGTTGGTTCGCGTATAGCAGCGATTCGCCCAATTTCATGCTTTTCGTTG
CGTGCTGGACAGCCTTCATCGCAACTCCCTATCTTGCCTTGGCGCCAGTA
TTCTTCCCCCAGTTGGCGCATCGGATCGTCATCCCAGCTGTCGAAGTGAT
TACCATGATATTCTGGTTCGCAGGATTCATCGCCCTAGCTGTATTCCTTC
CACCAGCAGAAGCCTGTCACTGGAGCCGTTGCAGCGCATTACAGGCCGCA
ACCGTGTTTGGTGCACTCGAGTGGTATGACTCCCCTCTGATCAAGATCGC
CATTCTTAGCGCTCGAGCGGAAAAGTTCAACTCTGTATTTCGGGACATGA
AGGATGTCGTTGATGAGCATTGTTACTAACATGGATTGCGTAGGGTACTA
TTTCTGGTTACTTCCGTTTTTGCTGTCCTCGGCATTTCGCGTACCCGGTC
CAGCTCCAGTACGAAGCCCACCCCTAACGATCATACCCACGTTGGCGTCT
AA back to topCoding sequence (CDS) from alignment at ch1:1710967..1711618+ >KJC3_000736-T1 ID=KJC3_000736-T1|Name=KJC3_000736-T1|organism=Aspergillus niger KJC3|type=CDS|length=1413bp|location=Sequence derived from alignment at ch1:1710967..1711618+ (Aspergillus niger KJC3)
ATGGCTGTGAATTTTCCATGGATCTACCCTGTTCGGGTAATCCAGGCCAT
CTTCGGAATAATCGTCCTTGCTTTAACCGCATACTATATCAGTTGGTTCG
CGTATAGCAGCGATTCGCCCAATTTCATGCTTTTCGTTGCGTGCTGGACA
GCCTTCATCGCAACTCCCTATCTTGCCTTGGCGCCAGTATTCTTCCCCCA
GTTGGCGCATCGGATCGTCATCCCAGCTGTCGAAGTGATTACCATGATAT
TCTGGTTCGCAGGATTCATCGCCCTAGCTGTATTCCTTCCACCAGCAGAA
GCCTGTCACTGGAGCCGTTGCAGCGCATTACAGGCCGCAACCGTGTTTGG
TGCACTCGAGTGGGTACTATTTCTGGTTACTTCCGTTTTTGCTGTCCTCG
GCATTTCGCGTACCCGGTCCAGCTCCAGTACGAAGCCCACCCCTAACGAT
CATACCCACGTTGGCGTCTAAATGGCTGTGAATTTTCCATGGATCTACCC
TGTTCGGGTAATCCAGGCCATCTTCGGAATAATCGTCCTTGCTTTAACCG
CATACTATATCAGTTGGTTCGCGTATAGCAGCGATTCGCCCAATTTCATG
CTTTTCGTTGCGTGCTGGACAGCCTTCATCGCAACTCCCTATCTTGCCTT
GGCGCCAGTATTCTTCCCCCAGTTGGCGCATCGGATCGTCATCCCAGCTG
TCGAAGTGATTACCATGATATTCTGGTTCGCAGGATTCATCGCCCTAGCT
GTATTCCTTCCACCAGCAGAAGCCTGTCACTGGAGCCGTTGCAGCGCATT
ACAGGCCGCAACCGTGTTTGGTGCACTCGAGTGGGTACTATTTCTGGTTA
CTTCCGTTTTTGCTGTCCTCGGCATTTCGCGTACCCGGTCCAGCTCCAGT
ACGAAGCCCACCCCTAACGATCATACCCACGTTGGCGTCTAAATGGCTGT
GAATTTTCCATGGATCTACCCTGTTCGGGTAATCCAGGCCATCTTCGGAA
TAATCGTCCTTGCTTTAACCGCATACTATATCAGTTGGTTCGCGTATAGC
AGCGATTCGCCCAATTTCATGCTTTTCGTTGCGTGCTGGACAGCCTTCAT
CGCAACTCCCTATCTTGCCTTGGCGCCAGTATTCTTCCCCCAGTTGGCGC
ATCGGATCGTCATCCCAGCTGTCGAAGTGATTACCATGATATTCTGGTTC
GCAGGATTCATCGCCCTAGCTGTATTCCTTCCACCAGCAGAAGCCTGTCA
CTGGAGCCGTTGCAGCGCATTACAGGCCGCAACCGTGTTTGGTGCACTCG
AGTGGGTACTATTTCTGGTTACTTCCGTTTTTGCTGTCCTCGGCATTTCG
CGTACCCGGTCCAGCTCCAGTACGAAGCCCACCCCTAACGATCATACCCA
CGTTGGCGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008253 |
| DBxref | PFAM:PF01284 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1710967..1711618 + |
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