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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1713294..1716383+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000737-T1 ID=KJC3_000737-T1|Name=KJC3_000737-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3090bp|location=Sequence derived from alignment at ch1:1713294..1716383+ (Aspergillus niger KJC3)
GTTTTAGTGCGGACGAGTGGCACGCACAATCCATAGCAGCAGCCTCTTGC
TAGACTCAGAGGTATGTAACTACTCCGTCCATTAGTGTGTAGGAAATGCT
GTGCCGATGTCAAAGCCAACTCAATTGAGGAAGGAAAGCACAAGACACAG
GATAGAAATTACGGGGGGAAAAGTGTTTTCATCATAAATCATGGCCATGA
CCATCATCCGTGATCTCAAACTCGTGGTCCTTGTCTGGGGGAAGCAGGCT
TCGACCCAAAGGGAATCTCTGCGCGAGGTTGCATCCGGCGTGCTGAACCC
CCATTCCCACCCCCTCATCTTGACTGTTCCTTTTACCTAAAGATTTTCAG
TCTTGGAGCATAATTCGATTAGATTCACTATCATCATCATTCGTTGCCTC
TCTTATCGGCGGGCAAAGATGGTCTGTTGACAAGACACGATACATAATCT
CTCGACGTGCATATGCATCTCCAGCCGTGTCTGTCGTACCTTAATCGTAG
GTGGATGCGATTCATCTTTAGCGGATTTCGGAGAGGCGACACGCAGAACC
CGCTTATAAGGAGGAGCTCGACGACTGGACGGACCCGAGTTTTGGTGACT
CAATCGAACCGTGTTCCCGGTGGAGTCGGTCCTGGCGGCGAGCTTCCTTT
TTCCTTCTTTTTCGCGATTTTGACTTTTGTGACCTCTTCCCGTCACTATC
ATACACACTGTACGTCTGACGCTCTAACCTTGAGGATATCAGCATCCTCA
GATTTTGGGGCCGTTGAGGGTCTAACATGGCCTTCGGGAACAAGGTCAAA
TCCACGTCTGCCGAGGGGGAAAAGGGCAAGATGGCGCCTGAAGAGACTGT
CCAGGTTCAGCCCACGAACCCTTCGTCCGACTTGAACGACATCGATTGTG
AGAAACATGGCGCCAGTCGCGAGTCAAATCCCATGCCCGATCTCAAGCGG
AAGCTGAGAAGTCGCCATCTTCAGATGATTGCCATTGGTGAGTCCTGCTG
GCTGTCTTGAGTTCTTTCCCTTTCTTCTTCTGCCGTAAGACAGGCGGCCA
TTCCGCAAGTGACAACCTGCTCATTCAATTCATAGGTGGTACTATTGGCA
CTGGTCTGTTCATCGGTAGTGGTACTGCTGTCGCCAACGGAGGTCCTGTT
GGTGCCCTCATTGCCTACATCTTCGTCGGTACGATCGTCTACTCGGTTAT
GACCTCCCTGGGTGAAATAGCGACCTATATTCCGATTCCTGGAGCGTTCA
CAGCCTACGCTGCTCGTCTGGTGGACCCCAGTCTTGGCTTCGCCATGGGG
TGGATCTATTGGTTTTCCTGGGCTAGTACATTTGCACTCGAGTTAACGGC
AACCGGTCTGATCATTCAATTCTGGGACGACTCCATCAATATCGCTATCT
TCATCGCCATCTTTTGGGTTCTGATAGCTCTATTGAATTTCCTGCCTGTC
AGCTTCTATGGTGAATTGGAATTCTGGCTTTCAAGTATCAAAGTTATCAC
CGTTGTTGGGTTCATGATCTTCGCCATCTGCATTGACGCCGGCGTCGGTG
ACAAAGGGTATCTCGGATTTCGCTATTGGGTCGACCCAGGCCCCTTTGCT
CCTTATTCGGGTGTCCACCCCGACTCGACAGCAAAGTTCGTCGGTTTCTG
GTCCGTTCTTATCCAGGCTGGCTTTTCGTATCAGGGAACGGAACTGGTCG
GTATCGCAGCCGCTGAGACAGAAAACCCTCGCAAAACGGTGCCTGCGGCT
ATTCGCAAGACCTTCTACCGCATTCTGTTCTTCTTCGTCCTGACCATCTT
CTTCATCGGTCTTCTGGTGCCCTACACCAACGAGAACCTCCTGACCGATG
GAAACGATGCTAACTCGTCGCCTTTTGTCATTGCGGCTAGGCTTGCTGGA
GTTAAGGTTCTGCCTCACATTATCAACGCAGTCCTGCTGACTGTGGTGCT
CTCTGCTGCCAATTCAAATGTTTACAGTGGCAGTCGTATCTTGCTTGGTC
TGGCTCAAGAAGGGTTTGCCCCGCGCTGGTTCAAGAAGACTTCTAAGAAG
GGTGTGCCATACTTCAGCGTTGCCTTCACGGCAGCCTTCGGTCTTCTCGG
TTTCATGAATGTCTCCAATGCAGGTAGCACTGTGTTCAACTGGCTCGTCA
ACATCGCCGGTGTCGCAGGCTTCATCACTTGGGCATCGTTGAACGGCTGC
CATCTTGCTTTCATGCGTGCCCTGAAGGCTCGCGACATCTCCCGTGACAC
CCTTCCTTATAAAGCTATCTGGCAGCCCTACTATTCCTGGTACGGGCTGT
TCTTCAACATCCTCATTATCATCACGCAAGGTTTCACCTCCTTTATTACC
AGCTTCAGCGTCACGGATTTCTTCATTGATTACATCAGTCTGATTCTCTT
CGTCGTGCTCTATGTTGGCCACAAGATCTACTTCCGGACATCTTTTGTCC
ATCCTCTTGAGGCTGATATTGATACGGGCCGCCAGGAGGTCGAGAACGAA
ACGTGGGAAACGGAGGCTCCCGCCACGAAATGGCACCAGAAGCTTGCACG
CTCATTCCTGGGCTGAGAGGATCGCGACTGGGCATCTCAGTACGGGCCCG
TCGTTACACCACTTGTGCTTCTGCTTTTTTATTGTCTTGTTTTAATTCTC
CCATATTCACGCCATACCTCTCCTCGGTTGATAGAGAGAGAGATATCCCT
ATTGCTTCTACATTTGAACCCTTTGGTTAATACATATGGCGCTTAGAAGT
TGGGGTTCACGCATATACACATCTGCTGAGACAGCTGTTGCTTGTCGGTA
TATATAAAAAAAGAGAGAAAGAGAGAGCGAGAGAGCGAGACGGATCTGCA
TGAGTTGATGATGAATGAGGGTCGGATGGGTGTCTTCCTCTTGATTATGA
GGGGCTTTTGTCTATATCTTTGGGTTCAACGGTCGAGCCTCTTCTGTACA
GTATACAAGTTGGGATGTCAGCATTGGCATGGAGTTTGGTAAATGGTTTT
TACTGTCGAACGTCTTGTTCGAACTGACTGTGGTCTAACTTTCCTGGAAT
CGAAAGTTTGCAATTAATCGACGTACTCTTGAATCTGCAG back to topCoding sequence (CDS) from alignment at ch1:1713294..1716383+ >KJC3_000737-T1 ID=KJC3_000737-T1|Name=KJC3_000737-T1|organism=Aspergillus niger KJC3|type=CDS|length=3384bp|location=Sequence derived from alignment at ch1:1713294..1716383+ (Aspergillus niger KJC3)
ATGGCCTTCGGGAACAAGGTCAAATCCACGTCTGCCGAGGGGGAAAAGGG
CAAGATGGCGCCTGAAGAGACTGTCCAGGTTCAGCCCACGAACCCTTCGT
CCGACTTGAACGACATCGATTGTGAGAAACATGGCGCCAGTCGCGAGTCA
AATCCCATGCCCGATCTCAAGCGGAAGCTGAGAAGTCGCCATCTTCAGAT
GATTGCCATTGGTGGTACTATTGGCACTGGTCTGTTCATCGGTAGTGGTA
CTGCTGTCGCCAACGGAGGTCCTGTTGGTGCCCTCATTGCCTACATCTTC
GTCGGTACGATCGTCTACTCGGTTATGACCTCCCTGGGTGAAATAGCGAC
CTATATTCCGATTCCTGGAGCGTTCACAGCCTACGCTGCTCGTCTGGTGG
ACCCCAGTCTTGGCTTCGCCATGGGGTGGATCTATTGGTTTTCCTGGGCT
AGTACATTTGCACTCGAGTTAACGGCAACCGGTCTGATCATTCAATTCTG
GGACGACTCCATCAATATCGCTATCTTCATCGCCATCTTTTGGGTTCTGA
TAGCTCTATTGAATTTCCTGCCTGTCAGCTTCTATGGTGAATTGGAATTC
TGGCTTTCAAGTATCAAAGTTATCACCGTTGTTGGGTTCATGATCTTCGC
CATCTGCATTGACGCCGGCGTCGGTGACAAAGGGTATCTCGGATTTCGCT
ATTGGGTCGACCCAGGCCCCTTTGCTCCTTATTCGGGTGTCCACCCCGAC
TCGACAGCAAAGTTCGTCGGTTTCTGGTCCGTTCTTATCCAGGCTGGCTT
TTCGTATCAGGGAACGGAACTGGTCGGTATCGCAGCCGCTGAGACAGAAA
ACCCTCGCAAAACGGTGCCTGCGGCTATTCGCAAGACCTTCTACCGCATT
CTGTTCTTCTTCGTCCTGACCATCTTCTTCATCGGTCTTCTGGTGCCCTA
CACCAACGAGAACCTCCTGACCGATGGAAACGATGCTAACTCGTCGCCTT
TTGTCATTGCGGCTAGGCTTGCTGGAGTTAAGGTTCTGCCTCACATTATC
AACGCAGTCCTGCTGACTGTGGTGCTCTCTGCTGCCAATTCAAATGTTTA
CAGTGGCAGTCGTATCTTGCTTGGTCTGGCTCAAGAAGGGTTTGCCCCGC
GCTGGTTCAAGAAGACTTCTAAGAAGGGTGTGCCATACTTCAGCGTTGCC
TTCACGGCAGCCTTCGGTCTTCTCGGTTTCATGAATGTCTCCAATGCAGG
TAGCACTGTGTTCAACTGGCTCGTCAACATCGCCGGTGTCGCAGGCTTCA
TCACTTGGGCATCGTTGAACGGCTGCCATCTTGCTTTCATGCGTGCCCTG
AAGGCTCGCGACATCTCCCGTGACACCCTTCCTTATAAAGCTATCTGGCA
GCCCTACTATTCCTGGTACGGGCTGTTCTTCAACATCCTCATTATCATCA
CGCAAGGTTTCACCTCCTTTATTACCAGCTTCAGCGTCACGGATTTCTTC
ATTGATTACATCAGTCTGATTCTCTTCGTCGTGCTCTATGTTGGCCACAA
GATCTACTTCCGGACATCTTTTGTCCATCCTCTTGAGGCTGATATTGATA
CGGGCCGCCAGGAGGTCGAGAACGAAACGTGGGAAACGGAGGCTCCCGCC
ACGAAATGGCACCAGAAGCTTGCACGCTCATTCCTGGGCTGAATGGCCTT
CGGGAACAAGGTCAAATCCACGTCTGCCGAGGGGGAAAAGGGCAAGATGG
CGCCTGAAGAGACTGTCCAGGTTCAGCCCACGAACCCTTCGTCCGACTTG
AACGACATCGATTGTGAGAAACATGGCGCCAGTCGCGAGTCAAATCCCAT
GCCCGATCTCAAGCGGAAGCTGAGAAGTCGCCATCTTCAGATGATTGCCA
TTGGTGGTACTATTGGCACTGGTCTGTTCATCGGTAGTGGTACTGCTGTC
GCCAACGGAGGTCCTGTTGGTGCCCTCATTGCCTACATCTTCGTCGGTAC
GATCGTCTACTCGGTTATGACCTCCCTGGGTGAAATAGCGACCTATATTC
CGATTCCTGGAGCGTTCACAGCCTACGCTGCTCGTCTGGTGGACCCCAGT
CTTGGCTTCGCCATGGGGTGGATCTATTGGTTTTCCTGGGCTAGTACATT
TGCACTCGAGTTAACGGCAACCGGTCTGATCATTCAATTCTGGGACGACT
CCATCAATATCGCTATCTTCATCGCCATCTTTTGGGTTCTGATAGCTCTA
TTGAATTTCCTGCCTGTCAGCTTCTATGGTGAATTGGAATTCTGGCTTTC
AAGTATCAAAGTTATCACCGTTGTTGGGTTCATGATCTTCGCCATCTGCA
TTGACGCCGGCGTCGGTGACAAAGGGTATCTCGGATTTCGCTATTGGGTC
GACCCAGGCCCCTTTGCTCCTTATTCGGGTGTCCACCCCGACTCGACAGC
AAAGTTCGTCGGTTTCTGGTCCGTTCTTATCCAGGCTGGCTTTTCGTATC
AGGGAACGGAACTGGTCGGTATCGCAGCCGCTGAGACAGAAAACCCTCGC
AAAACGGTGCCTGCGGCTATTCGCAAGACCTTCTACCGCATTCTGTTCTT
CTTCGTCCTGACCATCTTCTTCATCGGTCTTCTGGTGCCCTACACCAACG
AGAACCTCCTGACCGATGGAAACGATGCTAACTCGTCGCCTTTTGTCATT
GCGGCTAGGCTTGCTGGAGTTAAGGTTCTGCCTCACATTATCAACGCAGT
CCTGCTGACTGTGGTGCTCTCTGCTGCCAATTCAAATGTTTACAGTGGCA
GTCGTATCTTGCTTGGTCTGGCTCAAGAAGGGTTTGCCCCGCGCTGGTTC
AAGAAGACTTCTAAGAAGGGTGTGCCATACTTCAGCGTTGCCTTCACGGC
AGCCTTCGGTCTTCTCGGTTTCATGAATGTCTCCAATGCAGGTAGCACTG
TGTTCAACTGGCTCGTCAACATCGCCGGTGTCGCAGGCTTCATCACTTGG
GCATCGTTGAACGGCTGCCATCTTGCTTTCATGCGTGCCCTGAAGGCTCG
CGACATCTCCCGTGACACCCTTCCTTATAAAGCTATCTGGCAGCCCTACT
ATTCCTGGTACGGGCTGTTCTTCAACATCCTCATTATCATCACGCAAGGT
TTCACCTCCTTTATTACCAGCTTCAGCGTCACGGATTTCTTCATTGATTA
CATCAGTCTGATTCTCTTCGTCGTGCTCTATGTTGGCCACAAGATCTACT
TCCGGACATCTTTTGTCCATCCTCTTGAGGCTGATATTGATACGGGCCGC
CAGGAGGTCGAGAACGAAACGTGGGAAACGGAGGCTCCCGCCACGAAATG
GCACCAGAAGCTTGCACGCTCATTCCTGGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006865 | amino acid transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000737-T1.utr3p1 | KJC3_000737-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004840 |
| DBxref | InterPro:IPR004841 |
| DBxref | InterPro:IPR004762 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1713294..1716383 + |
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