You are here

Home

KJC3_000741-T1, KJC3_000741-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000741-T1
Unique NameKJC3_000741-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1723727..1725281-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000741-T1 ID=KJC3_000741-T1|Name=KJC3_000741-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1555bp|location=Sequence derived from alignment at ch1:1723727..1725281- (Aspergillus niger KJC3)
GATGTGTGAAAAGGGTGACGGTACACTGCAGACAGGTCTGTTGGCAGGCT
GGCGAATAGGCGAGGCATCAATAACACCTATGCAATTTTCCCCAAACTCT
CAGAACATGTTTGACATTAAATGGCATCCCACCTTGCCAATGTTTGCAGC
AGCAACATCGATAGGTCATGGCCCTGCCAACAAGGCTTACAAGGATACCA
GATCCCTAGTCCGAATGTATCAACCCTTGTCATCGAAAGTCTGCACCATG
GAGTTTGAGTGTCCGGCGCTAGATATCAACGACGCCCATATTTGCCCCAT
GAACCCAAGTTACGTGACAGCCAGCTGCACTGATGGAATTACCTATGTTT
GGGACCATCGACGCCCAGACCGAATTCTTCACAAGCTCCAACACGGAGAG
CCCCTAAATCAGATAGATGAAACAATCAGCAGGGAGCAAGCCGATGTTGG
TGTCCGTTTGTCTCTATGGGGTGATCGGATTGACGAGTTCTACACTGGGT
CCTCCGACGGAGTTTTAAAGAGATGGGATATTCTTAGAGCCCCGGAAGAT
GTGCTCGTCCAAGATACGGCCAGATTTGACGAGGAGATTATGTGCGGTGC
CTTTTCCAACGATAAGTCCAATCTGTTGGTCGGCGATGCTGCTGGGGGCG
TCCATCTCTTATCACCCGGCCCCTTTACAAGCAATGGGGGTCTTTCTATG
GAGTTCAAGCCTTCGTCGTTACAGCCTCAATTGCAGATGCGTCCTGATGG
GCATGTATCTAACCCCGAGTCAGGTATTAAGGCAGGTGCAGATCTCCTGG
AGTCCGGGAAGCTCACCAGGCACCCGATATTCGGAGTTGGACAAGGACCA
TACTATGATGGCCCCTTTGCAGCCTGGGCTCGTCCAGAAAACATCCCTGA
GTGTGAGATTGCACAAGCCCGCTTGAAGGAAGAGGTGCAGCTACGGCAAC
TTGAAGGTCCGCCCCCGGAATGCAGGATCGGGTTAGATACAGCGTCCCAG
CAGGATGTTAACGCGCAGATCAAGCTCGCACATATTCGGAACAAGCGGCG
CTATCAGAACAAAAGAACACGAGATGGGCTTGCAGAGCCTCTTGCATATG
GCAGGACAAATGCCGTTAATCTCGTTGGCGATGTACCCGACGAATTCAAG
CGCAGGTTACATCATGTTGTATCACCACCAGGTTCTATGCCACCGAATAC
TGAGGTCATTGAATTAGTCGGGGACACTGACACGGAATGGAAGACCGGCT
CGAATGTTATCCATTTCGCTGGATTCAAAACGGCCCTAGAAGAAGTAGAA
GAGGAACTCGAGGAAGACTTCTGGTGGCCGCCCAGTGGCACCATCGATGC
AAACATCCGAGAAGTTGACGGTATTTAGTCTGGGCCTGGCGAAATCGGTT
GGGAGAACGCTGATCCTATCACTGGCCCTCAGCTTCCTGCGGCAGGAAAG
TCATTCCTCCATGATGAATGATGTCAACGGTGTGCCGGCCAATTACATCA
CGTGGCTGAGCAGCGCCACGGGGCATTGCTGGGTGGCTTTACTTCGATAT
CCGTA
back to top

Coding sequence (CDS) from alignment at ch1:1723727..1725281-

>KJC3_000741-T1 ID=KJC3_000741-T1|Name=KJC3_000741-T1|organism=Aspergillus niger KJC3|type=CDS|length=1377bp|location=Sequence derived from alignment at ch1:1723727..1725281- (Aspergillus niger KJC3)
ATGTGTGAAAAGGGTGACGGTACACTGCAGACAGGTCTGTTGGCAGGCTG
GCGAATAGGCGAGGCATCAATAACACCTATGCAATTTTCCCCAAACTCTC
AGAACATGTTTGACATTAAATGGCATCCCACCTTGCCAATGTTTGCAGCA
GCAACATCGATAGGTCATGGCCCTGCCAACAAGGCTTACAAGGATACCAG
ATCCCTAGTCCGAATGTATCAACCCTTGTCATCGAAAGTCTGCACCATGG
AGTTTGAGTGTCCGGCGCTAGATATCAACGACGCCCATATTTGCCCCATG
AACCCAAGTTACGTGACAGCCAGCTGCACTGATGGAATTACCTATGTTTG
GGACCATCGACGCCCAGACCGAATTCTTCACAAGCTCCAACACGGAGAGC
CCCTAAATCAGATAGATGAAACAATCAGCAGGGAGCAAGCCGATGTTGGT
GTCCGTTTGTCTCTATGGGGTGATCGGATTGACGAGTTCTACACTGGGTC
CTCCGACGGAGTTTTAAAGAGATGGGATATTCTTAGAGCCCCGGAAGATG
TGCTCGTCCAAGATACGGCCAGATTTGACGAGGAGATTATGTGCGGTGCC
TTTTCCAACGATAAGTCCAATCTGTTGGTCGGCGATGCTGCTGGGGGCGT
CCATCTCTTATCACCCGGCCCCTTTACAAGCAATGGGGGTCTTTCTATGG
AGTTCAAGCCTTCGTCGTTACAGCCTCAATTGCAGATGCGTCCTGATGGG
CATGTATCTAACCCCGAGTCAGGTATTAAGGCAGGTGCAGATCTCCTGGA
GTCCGGGAAGCTCACCAGGCACCCGATATTCGGAGTTGGACAAGGACCAT
ACTATGATGGCCCCTTTGCAGCCTGGGCTCGTCCAGAAAACATCCCTGAG
TGTGAGATTGCACAAGCCCGCTTGAAGGAAGAGGTGCAGCTACGGCAACT
TGAAGGTCCGCCCCCGGAATGCAGGATCGGGTTAGATACAGCGTCCCAGC
AGGATGTTAACGCGCAGATCAAGCTCGCACATATTCGGAACAAGCGGCGC
TATCAGAACAAAAGAACACGAGATGGGCTTGCAGAGCCTCTTGCATATGG
CAGGACAAATGCCGTTAATCTCGTTGGCGATGTACCCGACGAATTCAAGC
GCAGGTTACATCATGTTGTATCACCACCAGGTTCTATGCCACCGAATACT
GAGGTCATTGAATTAGTCGGGGACACTGACACGGAATGGAAGACCGGCTC
GAATGTTATCCATTTCGCTGGATTCAAAACGGCCCTAGAAGAAGTAGAAG
AGGAACTCGAGGAAGACTTCTGGTGGCCGCCCAGTGGCACCATCGATGCA
AACATCCGAGAAGTTGACGGTATTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000741KJC3_000741Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000741-T1.cdsKJC3_000741-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000741-T1.utr3p1KJC3_000741-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000741-T1.exon1KJC3_000741-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000741-T1.utr5p1KJC3_000741-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000741-T1KJC3_000741-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1723727..1725281 -
Powered by Drupal