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KJC3_000743-T1, KJC3_000743-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000743-T1
Unique NameKJC3_000743-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1727939..1729730-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000743-T1 ID=KJC3_000743-T1|Name=KJC3_000743-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1792bp|location=Sequence derived from alignment at ch1:1727939..1729730- (Aspergillus niger KJC3)
GGACGGAGCATCCCCAATAATTCAGCTAAATTTCATATGGCATGAGCGTT
GATCCGATCAGCTGATGAGGGTCTCCCATCAGCCGAGGCACAGGCTTCGG
CAAACGTCATGTAAACCATCACCCCCAATCCAGAGCCGAGTCTTTCTCGC
ACCCGACATCGAAACAGTCCCTACTCCATTCGTCTCAAGGCCTACATATC
TACCCCTTTCTTCCTTTTCTGCAGTCATTCCTTGCGACCCTCTCGGGCAA
ATTTATTGAATTGTCGCTAGTTCCACTTACCGTCTTGTTCATACTCACTT
GTCAAAACAATTCGTATCGCATCTATAAGGATCCGAGGTACCGATTTACG
TGCACCGTCATAGTACAATATCGGCCGGCTTTCTTGACGCACCTATTCCC
GCTAGGAAAAGAGAACCACCGCGCTATCAATCATGTCTCAATCTAATATC
GAAGGGCAAAAGAAGGCGGTTGCGGTATCCGCTGCAGTCCAGCAAAGTGA
CAACATGGCACATGCATTGGCGGGCGCTGGAGGCGGTATTCTGTCGATGC
TCTTGACGTGCGGCAACACCTCCCGTTAATGAAATCAACGTTGACATCCC
ATATGTTGTAGTTACCCGCTGATAACCCTCTCAACGAGAGCGCAAGTCGA
GTCCAAGCGTGCCCATTCCACGACGTACGACGCTATACGCCGCATCATTC
AACGAGAGGGGGTTTCGGGGCTCTATTCCGGCCTTGAATCTGCGCTTTTT
GGCATCAGTGTCACGAACTTCGTCTACTACTACTGGTACGAATGGACGCG
CTCGGCTTTCGAAAAGGCGGCTGCGCGGGCTGGGCGGTCCTCAAAGAAGC
TCACAACGTCGGAGTCAATGATCGCGGGGGCCATCGCTGGGAGTGCGACA
GTCCTCATCACAAACCCAATATGGGTTGTAAACACTAGAATGACAGCCCG
CAAGTCCGAGTCGGAGCAAGAAACATTGCCAGGGGCTCCCTCCAAGAAGT
CGCGGGCATCCACAATCAGTACATTGATGGACTTGCTCCGGCAGGAGGGG
CCCAAGGCCCTCTTTGCTGGTGTTCTTCCGGCTCTTATATTGGTTATCAA
CCCGATCCTACAGTACACAATCTTTGAACAGCTGAAGAATATTCTGGAGC
GTCGTAGACGTATGACGCCAAAGGATGCGTTCTATCTTGGGGCTCTTGGT
AAGATACTGGCAACTTCGATTACCTATCCTTATATCACAGTGAAGAGCCG
CATGCATGTTGCCAGTAAAGATGGTCCTAAAGAAAGTTTGAACGGGAGTT
TGAAGAGAATTGTTAAAGAAGAGGGTTTTGTGGGTCTGTACAGAGGTATA
GTATTGACAATTGGGGATCCATGCAAACTTCAGCTAACATCACATGACAG
GCATTGGGCCGAAGGTCACACAGAGCGCCATTACTGCAGCGTTCTTGTTT
GCATTCAAGGATGTTCTTTATGACCTTATGGTCTCTCTACGGAAGAGGAA
CCGAGCAATTTCCAAGTAAAAACTGGAGAAGAAACTCATCTAGCACCATT
GCCAAAGAATCAGTATGACTTTGAACCAGAGATTTATACTTACTGATTTC
CATCACCGTGTGCCTTGAGCCAGACCACCGCTTTTTTGTCAATGATTTGG
ATATGCTCCGTACCCAAATGTACTCTTATTTGCTTCGGCACAGCGTTCTT
CTTCTTCTTCTTTCTTTTTGGCCGATCTGAGGAATCGAGATGTCTAGTTT
TTGCAATATATGCAGTACTAAGCCTTTCTGATCGGACCTGAT
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Coding sequence (CDS) from alignment at ch1:1727939..1729730-

>KJC3_000743-T1 ID=KJC3_000743-T1|Name=KJC3_000743-T1|organism=Aspergillus niger KJC3|type=CDS|length=2934bp|location=Sequence derived from alignment at ch1:1727939..1729730- (Aspergillus niger KJC3)
GCATTGGGCCGAAGGTCACACAGAGCGCCATTACTGCAGCGTTCTTGTTT
GCATTCAAGGATGTTCTTTATGACCTTATGGTCTCTCTACGGAAGAGGAA
CCGAGCAATTTCCAAGTAATTACCCGCTGATAACCCTCTCAACGAGAGCG
CAAGTCGAGTCCAAGCGTGCCCATTCCACGACGTACGACGCTATACGCCG
CATCATTCAACGAGAGGGGGTTTCGGGGCTCTATTCCGGCCTTGAATCTG
CGCTTTTTGGCATCAGTGTCACGAACTTCGTCTACTACTACTGGTACGAA
TGGACGCGCTCGGCTTTCGAAAAGGCGGCTGCGCGGGCTGGGCGGTCCTC
AAAGAAGCTCACAACGTCGGAGTCAATGATCGCGGGGGCCATCGCTGGGA
GTGCGACAGTCCTCATCACAAACCCAATATGGGTTGTAAACACTAGAATG
ACAGCCCGCAAGTCCGAGTCGGAGCAAGAAACATTGCCAGGGGCTCCCTC
CAAGAAGTCGCGGGCATCCACAATCAGTACATTGATGGACTTGCTCCGGC
AGGAGGGGCCCAAGGCCCTCTTTGCTGGTGTTCTTCCGGCTCTTATATTG
GTTATCAACCCGATCCTACAGTACACAATCTTTGAACAGCTGAAGAATAT
TCTGGAGCGTCGTAGACGTATGACGCCAAAGGATGCGTTCTATCTTGGGG
CTCTTGGTAAGATACTGGCAACTTCGATTACCTATCCTTATATCACAGTG
AAGAGCCGCATGCATGTTGCCAGTAAAGATGGTCCTAAAGAAAGTTTGAA
CGGGAGTTTGAAGAGAATTGTTAAAGAAGAGGGTTTTGTGGGTCTGTACA
GAGATGTCTCAATCTAATATCGAAGGGCAAAAGAAGGCGGTTGCGGTATC
CGCTGCAGTCCAGCAAAGTGACAACATGGCACATGCATTGGCGGGCGCTG
GAGGCGGTATTCTGTCGATGCTCTTGACGCATTGGGCCGAAGGTCACACA
GAGCGCCATTACTGCAGCGTTCTTGTTTGCATTCAAGGATGTTCTTTATG
ACCTTATGGTCTCTCTACGGAAGAGGAACCGAGCAATTTCCAAGTAATTA
CCCGCTGATAACCCTCTCAACGAGAGCGCAAGTCGAGTCCAAGCGTGCCC
ATTCCACGACGTACGACGCTATACGCCGCATCATTCAACGAGAGGGGGTT
TCGGGGCTCTATTCCGGCCTTGAATCTGCGCTTTTTGGCATCAGTGTCAC
GAACTTCGTCTACTACTACTGGTACGAATGGACGCGCTCGGCTTTCGAAA
AGGCGGCTGCGCGGGCTGGGCGGTCCTCAAAGAAGCTCACAACGTCGGAG
TCAATGATCGCGGGGGCCATCGCTGGGAGTGCGACAGTCCTCATCACAAA
CCCAATATGGGTTGTAAACACTAGAATGACAGCCCGCAAGTCCGAGTCGG
AGCAAGAAACATTGCCAGGGGCTCCCTCCAAGAAGTCGCGGGCATCCACA
ATCAGTACATTGATGGACTTGCTCCGGCAGGAGGGGCCCAAGGCCCTCTT
TGCTGGTGTTCTTCCGGCTCTTATATTGGTTATCAACCCGATCCTACAGT
ACACAATCTTTGAACAGCTGAAGAATATTCTGGAGCGTCGTAGACGTATG
ACGCCAAAGGATGCGTTCTATCTTGGGGCTCTTGGTAAGATACTGGCAAC
TTCGATTACCTATCCTTATATCACAGTGAAGAGCCGCATGCATGTTGCCA
GTAAAGATGGTCCTAAAGAAAGTTTGAACGGGAGTTTGAAGAGAATTGTT
AAAGAAGAGGGTTTTGTGGGTCTGTACAGAGATGTCTCAATCTAATATCG
AAGGGCAAAAGAAGGCGGTTGCGGTATCCGCTGCAGTCCAGCAAAGTGAC
AACATGGCACATGCATTGGCGGGCGCTGGAGGCGGTATTCTGTCGATGCT
CTTGACGCATTGGGCCGAAGGTCACACAGAGCGCCATTACTGCAGCGTTC
TTGTTTGCATTCAAGGATGTTCTTTATGACCTTATGGTCTCTCTACGGAA
GAGGAACCGAGCAATTTCCAAGTAATTACCCGCTGATAACCCTCTCAACG
AGAGCGCAAGTCGAGTCCAAGCGTGCCCATTCCACGACGTACGACGCTAT
ACGCCGCATCATTCAACGAGAGGGGGTTTCGGGGCTCTATTCCGGCCTTG
AATCTGCGCTTTTTGGCATCAGTGTCACGAACTTCGTCTACTACTACTGG
TACGAATGGACGCGCTCGGCTTTCGAAAAGGCGGCTGCGCGGGCTGGGCG
GTCCTCAAAGAAGCTCACAACGTCGGAGTCAATGATCGCGGGGGCCATCG
CTGGGAGTGCGACAGTCCTCATCACAAACCCAATATGGGTTGTAAACACT
AGAATGACAGCCCGCAAGTCCGAGTCGGAGCAAGAAACATTGCCAGGGGC
TCCCTCCAAGAAGTCGCGGGCATCCACAATCAGTACATTGATGGACTTGC
TCCGGCAGGAGGGGCCCAAGGCCCTCTTTGCTGGTGTTCTTCCGGCTCTT
ATATTGGTTATCAACCCGATCCTACAGTACACAATCTTTGAACAGCTGAA
GAATATTCTGGAGCGTCGTAGACGTATGACGCCAAAGGATGCGTTCTATC
TTGGGGCTCTTGGTAAGATACTGGCAACTTCGATTACCTATCCTTATATC
ACAGTGAAGAGCCGCATGCATGTTGCCAGTAAAGATGGTCCTAAAGAAAG
TTTGAACGGGAGTTTGAAGAGAATTGTTAAAGAAGAGGGTTTTGTGGGTC
TGTACAGAGATGTCTCAATCTAATATCGAAGGGCAAAAGAAGGCGGTTGC
GGTATCCGCTGCAGTCCAGCAAAGTGACAACATGGCACATGCATTGGCGG
GCGCTGGAGGCGGTATTCTGTCGATGCTCTTGAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000743KJC3_000743Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000743-T1KJC3_000743-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000743-T1.cdsKJC3_000743-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000743-T1.utr3p1KJC3_000743-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000743-T1.exon3KJC3_000743-T1.exon3Aspergillus niger KJC3exon
KJC3_000743-T1.exon2KJC3_000743-T1.exon2Aspergillus niger KJC3exon
KJC3_000743-T1.exon1KJC3_000743-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000743-T1.utr5p1KJC3_000743-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR023395
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1727939..1729730 -
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