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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1738875..1740105+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000747-T1 ID=KJC3_000747-T1|Name=KJC3_000747-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1231bp|location=Sequence derived from alignment at ch1:1738875..1740105+ (Aspergillus niger KJC3)
ACTATTTCCTAATCTTCAATCTGCATGGACCTCGGTTAATCTTGGTCCCG
GGCGCCCTTATAACGGACTCCCCCGTTGGCATCATTCACGAGGAAGTTGA
GCAGCAGAGAAACAGCAACAGATTGCACAGTAGAAGCAGTCACTCTGTTC
GAGACACCGGGAGAATTCTCGCCTTCGTTTCGAGTGCCAGAGGCCGCGCA
ACATATTCCTGAACCTGCATGACCCCTCGAATAAGCCCACTAGGTAGTTT
GAGAGCCTGGAGCAGTCTGTCACAGGATGTCAGAGCTACAGTCCTCAGAT
ATCGAGCTATTTGAAAGGTTGAGCTCATATCCCTTCGGTTCGGATCGTGA
GTTTGCAGTTGGGCTCTCCATCATACTAGGCCATCCGGAATCACCTGCAT
CGGAAGAGGAAATCAATCGCAGTGATGACCTTACACTACAAGCTAAATGC
TTCTACTTCTCAAGGTATACATAAATTCTGTATCCACCTGCGACCCCCGG
TATCATAGCATATGCATACGCCATTTCATGATAATATACAAGTACGTGGT
GCTGATTTCTGTCATCGTGCCTTGTTGTTCTCAGGAAAGAAAAGCTCACG
CCACCACTCGATTTCTCGACCTACAAAGCTTGGTTGGAATCAGCATCAAC
ATCTAAGTCAGCCGACCTTTCATCACCAGGCCCTACAGTGGACGTTCCAA
AGTCTCAAGAGGAGCCTACATATCCTTCATCCTTCGCTCATATAGTCGAA
CTCATCACGACCGGTCAACCAATCCCTGGAATCCAACAAATTCCAGACAC
CGTCTTGACAGGCCATGACAAACCGAGCGAGAAGCCAGAAAGGCGGAAAC
CATGGGAGAAAGGGATAGCTAGCAAATGACGGGATTTAAGTGCTCAGCGA
TAAATCCATGGGCTGCAACTGTCCGGGACCTGAAAATCTACATTGCCAAT
GGGTGGCTTCTGATGAAGTCCAGAGTTATGGTCAGCATGCAAATATCATT
ATTTCTGCAAATCGCAGGGTTGTGAAGGATAACAAGCTTCGGACAAATGA
GCGGCTGGTATGATACATCAGTTCATAATAAAAATATCATCCCGACGACT
AGTAGGTGAATTAGAAGTGTTCGTTCTCATAAACCAATCTCCTGACCTGC
ACTAGAATCTCCAGCAACTTCATAGGAACTGTAGTTTTTGAGTCCGTTTT
TGATACGTTTTTCGCTTGCTCGAATTTCCCC back to topCoding sequence (CDS) from alignment at ch1:1738875..1740105+ >KJC3_000747-T1 ID=KJC3_000747-T1|Name=KJC3_000747-T1|organism=Aspergillus niger KJC3|type=CDS|length=966bp|location=Sequence derived from alignment at ch1:1738875..1740105+ (Aspergillus niger KJC3)
ATGTCAGAGCTACAGTCCTCAGATATCGAGCTATTTGAAAGGTTGAGCTC
ATATCCCTTCGGTTCGGATCGTGAGTTTGCAGTTGGGCTCTCCATCATAC
TAGGCCATCCGGAATCACCTGCATCGGAAGAGGAAATCAATCGCAGTGAT
GACCTTACACTACAAGCTAAATGCTTCTACTTCTCAAGGAAAGAAAAGCT
CACGCCACCACTCGATTTCTCGACCTACAAAGCTTGGTTGGAATCAGCAT
CAACATCTAAGTCAGCCGACCTTTCATCACCAGGCCCTACAGTGGACGTT
CCAAAGTCTCAAGAGGAGCCTACATATCCTTCATCCTTCGCTCATATAGT
CGAACTCATCACGACCGGTCAACCAATCCCTGGAATCCAACAAATTCCAG
ACACCGTCTTGACAGGCCATGACAAACCGAGCGAGAAGCCAGAAAGGCGG
AAACCATGGGAGAAAGGGATAGCTAGCAAATGAATGTCAGAGCTACAGTC
CTCAGATATCGAGCTATTTGAAAGGTTGAGCTCATATCCCTTCGGTTCGG
ATCGTGAGTTTGCAGTTGGGCTCTCCATCATACTAGGCCATCCGGAATCA
CCTGCATCGGAAGAGGAAATCAATCGCAGTGATGACCTTACACTACAAGC
TAAATGCTTCTACTTCTCAAGGAAAGAAAAGCTCACGCCACCACTCGATT
TCTCGACCTACAAAGCTTGGTTGGAATCAGCATCAACATCTAAGTCAGCC
GACCTTTCATCACCAGGCCCTACAGTGGACGTTCCAAAGTCTCAAGAGGA
GCCTACATATCCTTCATCCTTCGCTCATATAGTCGAACTCATCACGACCG
GTCAACCAATCCCTGGAATCCAACAAATTCCAGACACCGTCTTGACAGGC
CATGACAAACCGAGCGAGAAGCCAGAAAGGCGGAAACCATGGGAGAAAGG
GATAGCTAGCAAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000747-T1.utr5p1 | KJC3_000747-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000747-T1.utr3p1 | KJC3_000747-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF17733 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1738875..1740105 + |
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