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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1745459..1747799+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000749-T1 ID=KJC3_000749-T1|Name=KJC3_000749-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2341bp|location=Sequence derived from alignment at ch1:1745459..1747799+ (Aspergillus niger KJC3)
CCGAACTGCTGCTACCCACGTACTTGCCCGCCCGTCCATCCTGACATACC
CCGATTCACGCAAGCTCACAAAACATCACGTCCAGCTTCCTTTATTGAGC
CCCAAAAGCCAATTTGTGCTTGTCACCGCTCAAGACGACTGGAGGGCACA
ACTGTCGTTCTCAATCGCCATACAAGAATCTGCTTCCATGGTAAAGTGGC
ATTACATTAACTTGCTTGAAGCCGGCTAACAGGACCGGCTAATTATCTAG
GTCGTCGATCTTGAGAAATTAGGACATGACCACAACAACTGTGACCGGCA
CTGGGAGACGCTCTTCTATACGACTACCAGACCTTCAAGTACCGGCGACT
TCATCCATCTCGCAACAAATGACCAGTCCGATAGACAAGTTCCCGCCTTT
CATTGATGAAGCACCTGAGCCTACGAGCGAACCAAGAGAAGCGCACTCCC
ATTCGGTTAGATATGCGGCGACAGATCGCTGGGAGCCACGGAAGCAACCC
CAATCTTCACGGGATAGCAGACATCCTACACTGAATTCGAAAAGAAGATC
AAGGAAAAGTATCAGTGATGCCATCAGCACAATTAGAACGCGCAACGGCA
GTGTTAGCGCCAATGCACAGGAGTTGGCTGAGGCCCTTAGAGCTCCGATA
TCATACAAGCTGATAGTAAGATTGTTGGATTCTCATGGATGTTTTCCCAC
CATATTGCTTACTCCGGGTTAGGTTCTCTGCCTCATATGGTACATGACCT
CCGCTCTGACGAATACCTCATCGAAGTCTATCTTAAATGCCCTTCCAAAA
CCAATAACGCTTACGATCGTACAATTTGCCTTCGTAGCATTCTGGTGCTT
GGTCCTAACCTATTTATCCACAGTGCTACCCTGGCTGAAAGATAGCATAC
CGGCCCTCAGGAACGGGATCCGTCCTCCGTCCCGTGATGTTGTCATGACA
GCTCTGCCTTTGGCAGTGTTCCAGTTAGCCGGCCATATACTTAGCTCTAT
GGCTACCTCACAGATTCCCGTCTCACTCGTCCACACAATCAAGGGACTGT
CACCCCTGTTCACAGTTCTGGCGTATCGGGTCTTCTTCCGAATTCGATAT
GCCAAAGCAACATATCTTTCTCTTGTCCCATTGACTTTAGGTGTGATGCT
CGCTTGCTCGACAGGCTTTTCCACAAACCTCTTCGGCATACTATGTGCGT
TAATTGCCGCATTGGTCTTCGTCTCGCAGAATATATTCTCAAAGAAGCTT
TTCAATGAAGCGTCCCGTGCAGAGTCAGAAGCAGAACCGTCGAGCCGACG
AAAATTGGATAAGTTGAACTTGCTCTACTATTGTTCCGGATTAGCCTTCA
TTCTCACACTACCTATCTGGTTCATAAGTGAAGGATATCCTTTGATTTCC
GATATTATACAGGATGGCGCCATCTCGTTGTCGGGAAATAGAGGCTCACT
GGATCATGGCGCTCTCTTCCTTGAATTCGTATTCAACGGAGTGTCGCACT
TCGCACAGAACATACTGGCATTTGTTCTCTTGTCTATGATATCACCAGTT
TCTTACTCCGTCGCATCTTTGGTGAAAAGAGTTTTCGTGATTGTTGTTGC
GATCGTGTGGTTTGGAAGCTCAACGACATCCATTCAAGGTTTTGGAATCG
CTCTTACCTTTATTGGACTCTACCTCTACGATCGCAATAGCCACGATGAT
CTAGCGGACCAGAGAGCAAATGCTGATCATTTCCGCACAAGGGAAACTGT
CCTTCCATTGAACGCCCAGACTGCAGGCAAAGTTTGGGACTCAAATGGCT
ATGGCGCTTCGGCAAGCAAGCTCTCTTACTATCAGTCACCAGATGGCCCT
ACCTCGCATGCAAGTACACCTAAGAAAGAAGATGATGACCAGGGCCGTGT
CCGTCCCAGAGGAGGCAGTAGCTCCCGGGTGTGGCTACCTCCTGGCACAA
AGCAAGAGACCACTTGGAAGGCGAATGATTCCTAGGTCTCTCATCTCTTG
GATGTCATCTTCATTGTCTTTGTTCTAAAACATCCGCTGTCTGATTATCT
TTTGAATTTCGAATGTAGCATATTACCATGGTCTCTAGTGAGGTGGCATC
AATATTGTAACAGACGCATTCTCTGACCAATCTGAAGCTATGCATGCCTA
AGCATATCTTCAGCTTGCATAGTTATATCAGCCTCATTGATAAGCAAAGT
TGGGCTATAGTGCTGGAAAACGAGTATACATGTCGATACCCGGCGAAAGT
TATGCTAAGGATGAGTTGAATGAGTCTTGGTGGGGAGGGGCAACTACTGC
TGCGACGCTCTGCTTACGAGATCGAGCTCCTAATGTTGACC back to topCoding sequence (CDS) from alignment at ch1:1745459..1747799+ >KJC3_000749-T1 ID=KJC3_000749-T1|Name=KJC3_000749-T1|organism=Aspergillus niger KJC3|type=CDS|length=3306bp|location=Sequence derived from alignment at ch1:1745459..1747799+ (Aspergillus niger KJC3)
ATGACCACAACAACTGTGACCGGCACTGGGAGACGCTCTTCTATACGACT
ACCAGACCTTCAAGTACCGGCGACTTCATCCATCTCGCAACAAATGACCA
GTCCGATAGACAAGTTCCCGCCTTTCATTGATGAAGCACCTGAGCCTACG
AGCGAACCAAGAGAAGCGCACTCCCATTCGGTTAGATATGCGGCGACAGA
TCGCTGGGAGCCACGGAAGCAACCCCAATCTTCACGGGATAGCAGACATC
CTACACTGAATTCGAAAAGAAGATCAAGGAAAAGTATCAGTGATGCCATC
AGCACAATTAGAACGCGCAACGGCAGTGTTAGCGCCAATGCACAGGAGTT
GGCTGAGGCCCTTAGAGCTCCGATATCATACAAGCTGATAGTTCTCTGCC
TCATATGGTACATGACCTCCGCTCTGACGAATACCTCATCGAAGTCTATC
TTAAATGCCCTTCCAAAACCAATAACGCTTACGATCGTACAATTTGCCTT
CGTAGCATTCTGGTGCTTGGTCCTAACCTATTTATCCACAGTGCTACCCT
GGCTGAAAGATAGCATACCGGCCCTCAGGAACGGGATCCGTCCTCCGTCC
CGTGATGTTGTCATGACAGCTCTGCCTTTGGCAGTGTTCCAGTTAGCCGG
CCATATACTTAGCTCTATGGCTACCTCACAGATTCCCGTCTCACTCGTCC
ACACAATCAAGGGACTGTCACCCCTGTTCACAGTTCTGGCGTATCGGGTC
TTCTTCCGAATTCGATATGCCAAAGCAACATATCTTTCTCTTGTCCCATT
GACTTTAGGTGTGATGCTCGCTTGCTCGACAGGCTTTTCCACAAACCTCT
TCGGCATACTATGTGCGTTAATTGCCGCATTGGTCTTCGTCTCGCAGAAT
ATATTCTCAAAGAAGCTTTTCAATGAAGCGTCCCGTGCAGAGTCAGAAGC
AGAACCGTCGAGCCGACGAAAATTGGATAAGTTGAACTTGCTCTACTATT
GTTCCGGATTAGCCTTCATTCTCACACTACCTATCTGGTTCATAAGTGAA
GGATATCCTTTGATTTCCGATATTATACAGGATGGCGCCATCTCGTTGTC
GGGAAATAGAGGCTCACTGGATCATGGCGCTCTCTTCCTTGAATTCGTAT
TCAACGGAGTGTCGCACTTCGCACAGAACATACTGGCATTTGTTCTCTTG
TCTATGATATCACCAGTTTCTTACTCCGTCGCATCTTTGGTGAAAAGAGT
TTTCGTGATTGTTGTTGCGATCGTGTGGTTTGGAAGCTCAACGACATCCA
TTCAAGGTTTTGGAATCGCTCTTACCTTTATTGGACTCTACCTCTACGAT
CGCAATAGCCACGATGATCTAGCGGACCAGAGAGCAAATGCTGATCATTT
CCGCACAAGGGAAACTGTCCTTCCATTGAACGCCCAGACTGCAGGCAAAG
TTTGGGACTCAAATGGCTATGGCGCTTCGGCAAGCAAGCTCTCTTACTAT
CAGTCACCAGATGGCCCTACCTCGCATGCAAGTACACCTAAGAAAGAAGA
TGATGACCAGGGCCGTGTCCGTCCCAGAGGAGGCAGTAGCTCCCGGGTGT
GGCTACCTCCTGGCACAAAGCAAGAGACCACTTGGAAGGCGAATGATTCC
TAGATGACCACAACAACTGTGACCGGCACTGGGAGACGCTCTTCTATACG
ACTACCAGACCTTCAAGTACCGGCGACTTCATCCATCTCGCAACAAATGA
CCAGTCCGATAGACAAGTTCCCGCCTTTCATTGATGAAGCACCTGAGCCT
ACGAGCGAACCAAGAGAAGCGCACTCCCATTCGGTTAGATATGCGGCGAC
AGATCGCTGGGAGCCACGGAAGCAACCCCAATCTTCACGGGATAGCAGAC
ATCCTACACTGAATTCGAAAAGAAGATCAAGGAAAAGTATCAGTGATGCC
ATCAGCACAATTAGAACGCGCAACGGCAGTGTTAGCGCCAATGCACAGGA
GTTGGCTGAGGCCCTTAGAGCTCCGATATCATACAAGCTGATAGTTCTCT
GCCTCATATGGTACATGACCTCCGCTCTGACGAATACCTCATCGAAGTCT
ATCTTAAATGCCCTTCCAAAACCAATAACGCTTACGATCGTACAATTTGC
CTTCGTAGCATTCTGGTGCTTGGTCCTAACCTATTTATCCACAGTGCTAC
CCTGGCTGAAAGATAGCATACCGGCCCTCAGGAACGGGATCCGTCCTCCG
TCCCGTGATGTTGTCATGACAGCTCTGCCTTTGGCAGTGTTCCAGTTAGC
CGGCCATATACTTAGCTCTATGGCTACCTCACAGATTCCCGTCTCACTCG
TCCACACAATCAAGGGACTGTCACCCCTGTTCACAGTTCTGGCGTATCGG
GTCTTCTTCCGAATTCGATATGCCAAAGCAACATATCTTTCTCTTGTCCC
ATTGACTTTAGGTGTGATGCTCGCTTGCTCGACAGGCTTTTCCACAAACC
TCTTCGGCATACTATGTGCGTTAATTGCCGCATTGGTCTTCGTCTCGCAG
AATATATTCTCAAAGAAGCTTTTCAATGAAGCGTCCCGTGCAGAGTCAGA
AGCAGAACCGTCGAGCCGACGAAAATTGGATAAGTTGAACTTGCTCTACT
ATTGTTCCGGATTAGCCTTCATTCTCACACTACCTATCTGGTTCATAAGT
GAAGGATATCCTTTGATTTCCGATATTATACAGGATGGCGCCATCTCGTT
GTCGGGAAATAGAGGCTCACTGGATCATGGCGCTCTCTTCCTTGAATTCG
TATTCAACGGAGTGTCGCACTTCGCACAGAACATACTGGCATTTGTTCTC
TTGTCTATGATATCACCAGTTTCTTACTCCGTCGCATCTTTGGTGAAAAG
AGTTTTCGTGATTGTTGTTGCGATCGTGTGGTTTGGAAGCTCAACGACAT
CCATTCAAGGTTTTGGAATCGCTCTTACCTTTATTGGACTCTACCTCTAC
GATCGCAATAGCCACGATGATCTAGCGGACCAGAGAGCAAATGCTGATCA
TTTCCGCACAAGGGAAACTGTCCTTCCATTGAACGCCCAGACTGCAGGCA
AAGTTTGGGACTCAAATGGCTATGGCGCTTCGGCAAGCAAGCTCTCTTAC
TATCAGTCACCAGATGGCCCTACCTCGCATGCAAGTACACCTAAGAAAGA
AGATGATGACCAGGGCCGTGTCCGTCCCAGAGGAGGCAGTAGCTCCCGGG
TGTGGCTACCTCCTGGCACAAAGCAAGAGACCACTTGGAAGGCGAATGAT
TCCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000749-T1.utr3p1 | KJC3_000749-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004853 |
| DBxref | PFAM:PF03151 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1745459..1747799 + |
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