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KJC3_000751-T1, KJC3_000751-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000751-T1
Unique NameKJC3_000751-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1751362..1752863-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000751-T1 ID=KJC3_000751-T1|Name=KJC3_000751-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1502bp|location=Sequence derived from alignment at ch1:1751362..1752863- (Aspergillus niger KJC3)
GAAGCTCGGACTTCATAGCTTGGGGGTTCTTGCGGCTAAAGCTTATAGTT
ACAGCTTGTCCAGGCAACACTCCACCCTCTCCTAGGCAGCCTAGACAGAT
CACAATTTCGTCATTATATAAAGTAAGATGCAATAGCTTTATACTGCATC
AAGTTCTGTCAGCTAAATTCAAAGCAATATGTCTACGTCTGAAAATGGGT
CACCTCGGGTTCTACGTGTCCCCAGGTCTGATGAGCCCGACAGTTATGTG
CTTCTCCATGTCACACGTACCAGTTCGGCTGCATTAGACTTGAATCTCGC
TGCAACGGAAGGAGAATTTCCGTATAAAGGGGTCGGTATGGAGAATCCAT
AATGCTGTTCCCTTTACCTGTTCCTTCTTGAAGTATTGTGATATACTAAG
TCACAATAGTGCAACAGTCTCGTGCGCAGACTCATCGTTCAAAGAGTTAT
CAGGGAACCGATGAGGACTGGGATCTTATCTTGCTGCGTGCCTTGGGCCA
GCTAGAGATCAATACAGATAAATCAGAGCTGCTATCTGGTGTCGAACTAT
CCGCTAGTATTAAGGCATTAGGTAGGCAGAGCAATCAACTGGTCCTCACT
ATTCGCCGAAGGATCCAAACTATAACTGTAAACCTGACCACCAAATAATA
TAATGATGTGGTGCTGATGATTCACAGCAAAGACTCGGTTCTATAGCGCT
CAAGCAGGATGATGAACAAGATATTCAGCTCTTCGACTGGTCCGCCGTCG
CCATTGCCAGAGCTGATATGCTTGAGCAGCGGCTATCAAGATTGCAACAG
CAGTATCGCGCAGCCGACAATACCATCAAGCAGCTCAATAAGCAAATTGA
GGACTTCATCACTGCAAAATGCCGCCATGAGGAACAGCTTATGACAAACT
TTACTCAGGTTCTAAATCAGAAGAAGCTCAAAATCCGCAATCAACAACGC
TTGTTGGCTTCGGCGAAAATTGATGTGGACGATGGTAAGGTCGCATGTCT
GAGTTAAAACAACAATAGCTGATACTGGAATGATAAAAATGTAGCTGGTC
AATGTCGGGCTGCCTCATCAAAAGTTGGGGCCCGTGTCGGGAGCATGAAG
CATGCGAAACGTCCTATTGTGGAAACGAGCGATGACGAGGCTGAAAGCGA
TAATGGCTCGGAGAGTTTGGATCAGACCAAGCATCAATCCAGTCCAAGAA
GAATGATAGACACGGATGACGAACCAAATTCGACTCCGCAGCCATTGGAG
GATGTGGGTGTAGATGATACCACTGACGAAGATTTGCCCACAGCGTCCGG
CGTCGATCAGGGAATAAGTGAACAGAACAATATGGAAGAAGCTCACCATC
CACCTAGGCTGCAAGAACAGTCACCTCCACCCCGCAGGGAGCTTCCATTC
GCCAAAGGGTCAAAATCAAGCAAAGACACCGTACAGAATATACAGCATCA
GCACGACACTGCCGAAGAAACTGCAGGCGAGACAGACGACGATGAGCTAT
GA
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Coding sequence (CDS) from alignment at ch1:1751362..1752863-

>KJC3_000751-T1 ID=KJC3_000751-T1|Name=KJC3_000751-T1|organism=Aspergillus niger KJC3|type=CDS|length=4560bp|location=Sequence derived from alignment at ch1:1751362..1752863- (Aspergillus niger KJC3)
CTGGTCAATGTCGGGCTGCCTCATCAAAAGTTGGGGCCCGTGTCGGGAGC
ATGAAGCATGCGAAACGTCCTATTGTGGAAACGAGCGATGACGAGGCTGA
AAGCGATAATGGCTCGGAGAGTTTGGATCAGACCAAGCATCAATCCAGTC
CAAGAAGAATGATAGACACGGATGACGAACCAAATTCGACTCCGCAGCCA
TTGGAGGATGTGGGTGTAGATGATACCACTGACGAAGATTTGCCCACAGC
GTCCGGCGTCGATCAGGGAATAAGTGAACAGAACAATATGGAAGAAGCTC
ACCATCCACCTAGGCTGCAAGAACAGTCACCTCCACCCCGCAGGGAGCTT
CCATTCGCCAAAGGGTCAAAATCAAGCAAAGACACCGTACAGAATATACA
GCATCAGCACGACACTGCCGAAGAAACTGCAGGCGAGACAGACGACGATG
AGCTATGACAAAGACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAA
GATATTCAGCTCTTCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATAT
GCTTGAGCAGCGGCTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACA
ATACCATCAAGCAGCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAA
TGCCGCCATGAGGAACAGCTTATGACAAACTTTACTCAGGTTCTAAATCA
GAAGAAGCTCAAAATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAA
TTGATGTGGACGATGTGCAACAGTCTCGTGCGCAGACTCATCGTTCAAAG
AGTTATCAGGGAACCGATGAGGACTGGGATCTTATCTTGCTGCGTGCCTT
GGGCCAGCTAGAGATCAATACAGATAAATCAGAGCTGCTATCTGGTGTCG
AACTATCCGCTAGTATTAAGGCATTAGGTAGGCAGAGCAATCAACTGGTC
CTCACTATTCGCCGAAGGATCCAAACTATAACTATGTCTACGTCTGAAAA
TGGGTCACCTCGGGTTCTACGTGTCCCCAGGTCTGATGAGCCCGACAGTT
ATGTGCTTCTCCATGTCACACGTACCAGTTCGGCTGCATTAGACTTGAAT
CTCGCTGCAACGGAAGGAGAATTTCCGTATAAAGGGGTCGCTGGTCAATG
TCGGGCTGCCTCATCAAAAGTTGGGGCCCGTGTCGGGAGCATGAAGCATG
CGAAACGTCCTATTGTGGAAACGAGCGATGACGAGGCTGAAAGCGATAAT
GGCTCGGAGAGTTTGGATCAGACCAAGCATCAATCCAGTCCAAGAAGAAT
GATAGACACGGATGACGAACCAAATTCGACTCCGCAGCCATTGGAGGATG
TGGGTGTAGATGATACCACTGACGAAGATTTGCCCACAGCGTCCGGCGTC
GATCAGGGAATAAGTGAACAGAACAATATGGAAGAAGCTCACCATCCACC
TAGGCTGCAAGAACAGTCACCTCCACCCCGCAGGGAGCTTCCATTCGCCA
AAGGGTCAAAATCAAGCAAAGACACCGTACAGAATATACAGCATCAGCAC
GACACTGCCGAAGAAACTGCAGGCGAGACAGACGACGATGAGCTATGACA
AAGACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAAGATATTCAGC
TCTTCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATATGCTTGAGCAG
CGGCTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACAATACCATCAA
GCAGCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAATGCCGCCATG
AGGAACAGCTTATGACAAACTTTACTCAGGTTCTAAATCAGAAGAAGCTC
AAAATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAATTGATGTGGA
CGATGTGCAACAGTCTCGTGCGCAGACTCATCGTTCAAAGAGTTATCAGG
GAACCGATGAGGACTGGGATCTTATCTTGCTGCGTGCCTTGGGCCAGCTA
GAGATCAATACAGATAAATCAGAGCTGCTATCTGGTGTCGAACTATCCGC
TAGTATTAAGGCATTAGGTAGGCAGAGCAATCAACTGGTCCTCACTATTC
GCCGAAGGATCCAAACTATAACTATGTCTACGTCTGAAAATGGGTCACCT
CGGGTTCTACGTGTCCCCAGGTCTGATGAGCCCGACAGTTATGTGCTTCT
CCATGTCACACGTACCAGTTCGGCTGCATTAGACTTGAATCTCGCTGCAA
CGGAAGGAGAATTTCCGTATAAAGGGGTCGCTGGTCAATGTCGGGCTGCC
TCATCAAAAGTTGGGGCCCGTGTCGGGAGCATGAAGCATGCGAAACGTCC
TATTGTGGAAACGAGCGATGACGAGGCTGAAAGCGATAATGGCTCGGAGA
GTTTGGATCAGACCAAGCATCAATCCAGTCCAAGAAGAATGATAGACACG
GATGACGAACCAAATTCGACTCCGCAGCCATTGGAGGATGTGGGTGTAGA
TGATACCACTGACGAAGATTTGCCCACAGCGTCCGGCGTCGATCAGGGAA
TAAGTGAACAGAACAATATGGAAGAAGCTCACCATCCACCTAGGCTGCAA
GAACAGTCACCTCCACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCAAA
ATCAAGCAAAGACACCGTACAGAATATACAGCATCAGCACGACACTGCCG
AAGAAACTGCAGGCGAGACAGACGACGATGAGCTATGACAAAGACTCGGT
TCTATAGCGCTCAAGCAGGATGATGAACAAGATATTCAGCTCTTCGACTG
GTCCGCCGTCGCCATTGCCAGAGCTGATATGCTTGAGCAGCGGCTATCAA
GATTGCAACAGCAGTATCGCGCAGCCGACAATACCATCAAGCAGCTCAAT
AAGCAAATTGAGGACTTCATCACTGCAAAATGCCGCCATGAGGAACAGCT
TATGACAAACTTTACTCAGGTTCTAAATCAGAAGAAGCTCAAAATCCGCA
ATCAACAACGCTTGTTGGCTTCGGCGAAAATTGATGTGGACGATGTGCAA
CAGTCTCGTGCGCAGACTCATCGTTCAAAGAGTTATCAGGGAACCGATGA
GGACTGGGATCTTATCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAATA
CAGATAAATCAGAGCTGCTATCTGGTGTCGAACTATCCGCTAGTATTAAG
GCATTAGGTAGGCAGAGCAATCAACTGGTCCTCACTATTCGCCGAAGGAT
CCAAACTATAACTATGTCTACGTCTGAAAATGGGTCACCTCGGGTTCTAC
GTGTCCCCAGGTCTGATGAGCCCGACAGTTATGTGCTTCTCCATGTCACA
CGTACCAGTTCGGCTGCATTAGACTTGAATCTCGCTGCAACGGAAGGAGA
ATTTCCGTATAAAGGGGTCGCTGGTCAATGTCGGGCTGCCTCATCAAAAG
TTGGGGCCCGTGTCGGGAGCATGAAGCATGCGAAACGTCCTATTGTGGAA
ACGAGCGATGACGAGGCTGAAAGCGATAATGGCTCGGAGAGTTTGGATCA
GACCAAGCATCAATCCAGTCCAAGAAGAATGATAGACACGGATGACGAAC
CAAATTCGACTCCGCAGCCATTGGAGGATGTGGGTGTAGATGATACCACT
GACGAAGATTTGCCCACAGCGTCCGGCGTCGATCAGGGAATAAGTGAACA
GAACAATATGGAAGAAGCTCACCATCCACCTAGGCTGCAAGAACAGTCAC
CTCCACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCAAAATCAAGCAAA
GACACCGTACAGAATATACAGCATCAGCACGACACTGCCGAAGAAACTGC
AGGCGAGACAGACGACGATGAGCTATGACAAAGACTCGGTTCTATAGCGC
TCAAGCAGGATGATGAACAAGATATTCAGCTCTTCGACTGGTCCGCCGTC
GCCATTGCCAGAGCTGATATGCTTGAGCAGCGGCTATCAAGATTGCAACA
GCAGTATCGCGCAGCCGACAATACCATCAAGCAGCTCAATAAGCAAATTG
AGGACTTCATCACTGCAAAATGCCGCCATGAGGAACAGCTTATGACAAAC
TTTACTCAGGTTCTAAATCAGAAGAAGCTCAAAATCCGCAATCAACAACG
CTTGTTGGCTTCGGCGAAAATTGATGTGGACGATGTGCAACAGTCTCGTG
CGCAGACTCATCGTTCAAAGAGTTATCAGGGAACCGATGAGGACTGGGAT
CTTATCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAATACAGATAAATC
AGAGCTGCTATCTGGTGTCGAACTATCCGCTAGTATTAAGGCATTAGGTA
GGCAGAGCAATCAACTGGTCCTCACTATTCGCCGAAGGATCCAAACTATA
ACTATGTCTACGTCTGAAAATGGGTCACCTCGGGTTCTACGTGTCCCCAG
GTCTGATGAGCCCGACAGTTATGTGCTTCTCCATGTCACACGTACCAGTT
CGGCTGCATTAGACTTGAATCTCGCTGCAACGGAAGGAGAATTTCCGTAT
AAAGGGGTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0006302double-strand break repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000751KJC3_000751Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000751-T1KJC3_000751-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000751-T1.cdsKJC3_000751-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000751-T1.exon5KJC3_000751-T1.exon5Aspergillus niger KJC3exon
KJC3_000751-T1.exon4KJC3_000751-T1.exon4Aspergillus niger KJC3exon
KJC3_000751-T1.exon3KJC3_000751-T1.exon3Aspergillus niger KJC3exon
KJC3_000751-T1.exon2KJC3_000751-T1.exon2Aspergillus niger KJC3exon
KJC3_000751-T1.exon1KJC3_000751-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000751-T1.utr5p2KJC3_000751-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000751-T1.utr5p1KJC3_000751-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010585
DBxrefPFAM:PF06632
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1751362..1752863 -
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