|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1770341..1771155+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000757-T1 ID=KJC3_000757-T1|Name=KJC3_000757-T1|organism=Aspergillus niger KJC3|type=mRNA|length=815bp|location=Sequence derived from alignment at ch1:1770341..1771155+ (Aspergillus niger KJC3)
CGAACACGCTGTGTCGACAATGGCGTCGTACAGCAGACTGCTTGATCTGG
TCAAGGTATTTAGCAGAGCGCAGCTTAGCTGTGATAACCCCCTTCATAGC
TGTCTCTTTTTACTTCCCAGGCTAATGCGTACCACTCCGGCCAGGTCCAA
TGTCGGATCTTCTCGCTGAACTTTAATCCCGAGAGGATGCGATTGGGAAA
CAAGATCCTACGACAGCGTCTGCGTGGCCCGGCACTTGCAGCATGGTACC
CGAGGAAGACCGTCTCATTCCGCGACTTGCAGGACACGTACAGCCGCTCA
GGTCTAACAATGTTCGATGAGGCTGAGGATGATCGCGAGGAAGCAATCCA
AATGTATGTTCCTTGGGGAAGTCTTTTCTACCATATGCTTATTTTCCTGG
GATAGTGCGAAGTTACGAGGGAAGGGCCGACCCAAAAAGAAAAGAACGGC
TGCAGGTAATGTTCAACAGTCGAGAACGGTTTGCGCATAAATGTCTAACT
TGTGAACATAGAGTCGCGGTCAGCGAAAAAGAAGAAATAGATTCCCCGTG
GCAAGTAATGTTGAACAGATAGTTTTATTGCAAAGGGTTATCCACTATGC
TGTGCGATATGGCCTATATCGAAACCATTGGATTAGTGCTCCCTTCAAGC
TTATCCGGTTTCATGTTTTCTTCATTACTGTTTTTCCTTGTTTTCTACAT
TCTGGGTCTGTACATTATAAGAGTTAGATAAATCGAACATTATGACTAAT
TTTATAGTATTGTATGTTAGCTCGAAGCAATTGTTTCTAGACCATCAAAT
GGGTGTTCGGAGAAA back to topCoding sequence (CDS) from alignment at ch1:1770341..1771155+ >KJC3_000757-T1 ID=KJC3_000757-T1|Name=KJC3_000757-T1|organism=Aspergillus niger KJC3|type=CDS|length=1296bp|location=Sequence derived from alignment at ch1:1770341..1771155+ (Aspergillus niger KJC3)
ATGGCGTCGTACAGCAGACTGCTTGATCTGGTCAAGGTCCAATGTCGGAT
CTTCTCGCTGAACTTTAATCCCGAGAGGATGCGATTGGGAAACAAGATCC
TACGACAGCGTCTGCGTGGCCCGGCACTTGCAGCATGGTACCCGAGGAAG
ACCGTCTCATTCCGCGACTTGCAGGACACGTACAGCCGCTCAGGTCTAAC
AATGTTCGATGAGGCTGAGGATGATCGCGAGGAAGCAATCCAAATTGCGA
AGTTACGAGGGAAGGGCCGACCCAAAAAGAAAAGAACGGCTGCAGAGTCG
CGGTCAGCGAAAAAGAAGAAATAGATGGCGTCGTACAGCAGACTGCTTGA
TCTGGTCAAGGTCCAATGTCGGATCTTCTCGCTGAACTTTAATCCCGAGA
GGATGCGATTGGGAAACAAGATCCTACGACAGCGTCTGCGTGGCCCGGCA
CTTGCAGCATGGTACCCGAGGAAGACCGTCTCATTCCGCGACTTGCAGGA
CACGTACAGCCGCTCAGGTCTAACAATGTTCGATGAGGCTGAGGATGATC
GCGAGGAAGCAATCCAAATTGCGAAGTTACGAGGGAAGGGCCGACCCAAA
AAGAAAAGAACGGCTGCAGAGTCGCGGTCAGCGAAAAAGAAGAAATAGAT
GGCGTCGTACAGCAGACTGCTTGATCTGGTCAAGGTCCAATGTCGGATCT
TCTCGCTGAACTTTAATCCCGAGAGGATGCGATTGGGAAACAAGATCCTA
CGACAGCGTCTGCGTGGCCCGGCACTTGCAGCATGGTACCCGAGGAAGAC
CGTCTCATTCCGCGACTTGCAGGACACGTACAGCCGCTCAGGTCTAACAA
TGTTCGATGAGGCTGAGGATGATCGCGAGGAAGCAATCCAAATTGCGAAG
TTACGAGGGAAGGGCCGACCCAAAAAGAAAAGAACGGCTGCAGAGTCGCG
GTCAGCGAAAAAGAAGAAATAGATGGCGTCGTACAGCAGACTGCTTGATC
TGGTCAAGGTCCAATGTCGGATCTTCTCGCTGAACTTTAATCCCGAGAGG
ATGCGATTGGGAAACAAGATCCTACGACAGCGTCTGCGTGGCCCGGCACT
TGCAGCATGGTACCCGAGGAAGACCGTCTCATTCCGCGACTTGCAGGACA
CGTACAGCCGCTCAGGTCTAACAATGTTCGATGAGGCTGAGGATGATCGC
GAGGAAGCAATCCAAATTGCGAAGTTACGAGGGAAGGGCCGACCCAAAAA
GAAAAGAACGGCTGCAGAGTCGCGGTCAGCGAAAAAGAAGAAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000757-T1.utr5p1 | KJC3_000757-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000757-T1.utr3p1 | KJC3_000757-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013219 |
| DBxref | PFAM:PF08293 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1770341..1771155 + |
|
