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KJC3_000761-T1, KJC3_000761-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000761-T1
Unique NameKJC3_000761-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1873543..1874287+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000761-T1 ID=KJC3_000761-T1|Name=KJC3_000761-T1|organism=Aspergillus niger KJC3|type=mRNA|length=745bp|location=Sequence derived from alignment at ch1:1873543..1874287+ (Aspergillus niger KJC3)
ATGGCTGGTACAAGGAACTACGACTTTCTGGTAAGTATTGACTAAACTCC
CAAGAAACCATAAGCTAAATGTCGGTCTTTGTAGATCAAGTTACTACTTA
TTGGGGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAA
GACTCGTTCACTCCGTCGTTCATCACTACCATCGGAATCGACTTCAAAAT
ACGTACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATA
CAGCTGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGA
GCCATGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCA
AAGTGAGAAACGCCTTCCTTAAACCTGAGGTGGGTCATAAGATAATTTGA
TGCTAATGCCCAATCACCTTAGACATTCGCACCTGGTTCTCAAATGTCGA
ACAACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTG
ATTGGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCT
AATGAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAA
CATCGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGG
ATACGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAG
CAAGGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGA
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Coding sequence (CDS) from alignment at ch1:1873543..1874287+

>KJC3_000761-T1 ID=KJC3_000761-T1|Name=KJC3_000761-T1|organism=Aspergillus niger KJC3|type=CDS|length=1863bp|location=Sequence derived from alignment at ch1:1873543..1874287+ (Aspergillus niger KJC3)
ATGGCTGGTACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGG
GGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACT
CGTTCACTCCGTCGTTCATCACTACCATCGGAATCGACTTCAAAATACGT
ACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGC
TGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCA
TGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAAC
ATTCGCACCTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCA
CAAGATCCTTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGT
CAACCGAGCAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTT
GAAGTATCGGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCT
CGCATCCGACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCG
GCTCTCAGGGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGC
GCAGGTGGGAAGTGCTGTTGAATGGCTGGTACAAGGAACTACGACTTTCT
GATCAAGTTACTACTTATTGGGGACTCTGGGGTGGGAAAGTCATGCTGTC
TATTGCGATTCAGTGAAGACTCGTTCACTCCGTCGTTCATCACTACCATC
GGAATCGACTTCAAAATACGTACCATCGAATTGGACGGTAAAAGAGTAAA
GCTCCAGATATGGGATACAGCTGGGCAAGAGCGATTTAGAACTATCACTA
CTGCTTACTACAGAGGAGCCATGGGCATTCTTCTTGTATACGATGTCACT
GATGAAAGATCATTCCAAAACATTCGCACCTGGTTCTCAAATGTCGAACA
ACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTGATT
GGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCTAAT
GAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAACAT
CGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGGATA
CGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAGCAA
GGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGAATGGCTGG
TACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGGGGACTCTG
GGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACTCGTTCACT
CCGTCGTTCATCACTACCATCGGAATCGACTTCAAAATACGTACCATCGA
ATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGCTGGGCAAG
AGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCATGGGCATT
CTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAACATTCGCAC
CTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCACAAGATCC
TTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGTCAACCGAG
CAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTTGAAGTATC
GGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCTCGCATCCG
ACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCGGCTCTCAG
GGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGCGCAGGTGG
GAAGTGCTGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT2KJC3_000761Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000761-T1.exon1KJC3_000761-T1.exon1Aspergillus niger KJC3exon
KJC3_000761-T1.exon2KJC3_000761-T1.exon2Aspergillus niger KJC3exon
KJC3_000761-T1.exon3KJC3_000761-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000761-T1.cdsKJC3_000761-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000761-T1KJC3_000761-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
ProductGTPase Ypt2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1873543..1874287 +
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