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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1892522..1895155- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000768-T1 ID=KJC3_000768-T1|Name=KJC3_000768-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2634bp|location=Sequence derived from alignment at ch1:1892522..1895155- (Aspergillus niger KJC3)
CAACAACAAAACAACAACACCGGACCTCGTATCGCATGGGCGACATTCCC
CACCCTTTCTTCCTTGCTCCTTTTGCTTTTCAATCGTCCAACGCCTCTTC
GGTGGTTTGCTCTCCCCCCACCCCCTCCTCCTTTTCCATTCGTTCTTAGC
AGCTTAATACCCGGTTCGCTGGTGTAACTCCTACCTCTTTCCAACCCTTC
CATCCCTGATACGATCCCGTGTATTCCTGTGGCCCACTGCAACCGCCTAT
CTGCCAAGACCTAGCTGTTAGTTCGATTGTGACTATGCCACCCAAGAAAA
GCGCACCCAAGCCGGCTGCGGCATCAGCTGCGACGGCAAAGGGTAAACGG
GCCACATCTACTACAACTACTACGACGAAGGCAGCTACGAAAGCAACTAC
AAAGGCAACCACCAGAACAACAACGAAAGCGAATAAGACAACCGCCACGA
CCACTACTGCTCGCAAAGTTCCAATTGACAAGCGAGAGACCCCTTCGAAG
CCCAAGAAGACCACCAAGAGACAACCCGTGAAATCCACCACAGCTACCAA
AGGTGGAACAGTCGACAACCTTGCAAGCAAGAAGCATGAAGCTGAGCCTG
CGAGACGTGAGAAGCGGAAAGCAGAAGTTATCGATGAAGCTCCTGCTCGC
GATTTGAAGAAAGCTCGTGTTGCTAAACCCCGGGTTACTAAACTGAAGCC
GAAGGTGGTCATCAACCATGCGCCAACCACTCGATTAAATGTCTATGTGT
GCGGTGAAGGCAGCTCAGGCGAGTTGGGGCTAGGATCTGCTAAGAATGCA
GTTGATGTGAAGCGGCCTCGGTTGAATGCCAACTTGCCAGCGGACCGTGT
CGGTGCTGTCCAGGTCGCTGTTGGTGGCATGCATTGCGTTGCGCTTACGT
ATGACAACAGGATCCTTACATGGGGCGTCAACGATCAAGGAGCCCTTGGC
AGAGATACTGCTTGGGATGGTGGGTACAAAGATATCGACGAAGCCAACAA
TGGGTCAGACTCGGAATCCGATGATGACATTGCTCTAAACCCCTACGAAT
CAACTCCCACCGCTATTCCGTCAGAGGCTTTCCCGAAAGACACCGTCTTC
GTTCAAGTCGCTGCTGGCGACAGCTCAAGCTTTGCCCTTACAGATGATGG
TCAAGTTTATGGTTGGGGAACATTCAGAGTAAGTCAAGCTTTGCACGCCC
TTGTATACAGAGCTGCTTGAGCTAAGAGGCGATTTAGAGCAATGATGGTA
TCTTAGGTTTTGATGCCGCCAATAAAGTCCAACATACGCCTAGTCTGATA
CCGTCTTTGAAGAAAATCAAACACCTGGCATGTGGCGATAATCACGTCTT
AGCACTGAATGATAAAGGTGCTGTGTTATCATGGGGTTCGGGTCAGCAAA
ACCAATTGGGCCGTCGTATCATTGAGCGAAACAGGCTGAACGGTCTGCAG
CCGCGCGAGTTTGGCCTGCCGAAGAATATTGTGCATATTGGCTGTGGTGC
TTTCCATTCATTCGCTGTTCATCAGTCTGGAAAGGTTTACGCATGGGGTC
TGAACAGTTTCGGCGAAACGGGTATCAGGGCTGGTGCCGGTGATGACGAA
GCTGCGATTGTGCACCCCACCGTCGTGGATTCGCTATCTGGAAAAGCAGT
CACACAAATCTGCGGCGGCGCCCATCATTCGCTTGCTATCGCTAATGATG
GCGAGTGCCTTGTATGGGGACGATTGGATGGCTACCAGACAGGTCTGAAA
ATCGATAGTCTAGCCGAGGATGCGGTCATCAAGGACGAGCGTGGGCGGCC
TCGTATCTTGATAGATCCCAAAGCTGTTCCTGGAGTCAAGGCCATTGCTG
TTGCAGCCGGTTCAGACCATTCACTCGTCATTGATGTAGAGGGTCGTCCT
TGGTCGTGGGGCTTTTCCGCCACCTATCAAACGGGCCAAGGTACACCTGA
TGACATCGAAGTAGCGACTGTCATCGAGAATACTGCCGTTCGTGGTAAGA
AGTTAAACTGGGCAGGTGGTGGTGGTCAATTCTCTGTGTTCACAGAGCCT
GCAGCATTAGCATAATTTATAAGCTAATGCCAGGGAAGAAAAGGGAGGCA
CACCGGCACTTCAAATTCGTCTCCAATGGGTCCATTGCAAGGGCGTGTTT
CAATTGTCTTAGCAGTATTGTTGATTACGCTTAGACCAGTCAATAAATAC
ATTGCAGACACGGAAGAAGAGGAAAATAGAATAAAAAGGAAAATAGAAAA
AGAGAGAGAAAGGGCACATTATGCTGGTATCTGCCGCATCTCGGCATTTC
CGATAATACATGTACTTTATGTTTTATAAGTCATTCGTAAACTAGAGAAA
AGGAGCAAGGACAAGTAAAAAAAGACCGAGCTGGTTCGTAGACCGTTCTT
GTGGAATTTACGCTATGTATAAACAATTCGCCCACTGTATGAATCATGTA
TTAGTGCATTGAGTAGTTGTAATCCTCAAAATATCGATGTCATTTAAAGG
ACCCAGGTTACCTATAGGCCTACTGAGTCAAGCCCTTATATCTGATCCTG
CCAGATTATTGTTACCAATAAAACCATCCTCGTGCTCCCGAAGAAGTGCT
TCCAGCTCATCATCATCATCATCATCATCATCAT back to topCoding sequence (CDS) from alignment at ch1:1892522..1895155- >KJC3_000768-T1 ID=KJC3_000768-T1|Name=KJC3_000768-T1|organism=Aspergillus niger KJC3|type=CDS|length=3444bp|location=Sequence derived from alignment at ch1:1892522..1895155- (Aspergillus niger KJC3)
AGCAATGATGGTATCTTAGGTTTTGATGCCGCCAATAAAGTCCAACATAC
GCCTAGTCTGATACCGTCTTTGAAGAAAATCAAACACCTGGCATGTGGCG
ATAATCACGTCTTAGCACTGAATGATAAAGGTGCTGTGTTATCATGGGGT
TCGGGTCAGCAAAACCAATTGGGCCGTCGTATCATTGAGCGAAACAGGCT
GAACGGTCTGCAGCCGCGCGAGTTTGGCCTGCCGAAGAATATTGTGCATA
TTGGCTGTGGTGCTTTCCATTCATTCGCTGTTCATCAGTCTGGAAAGGTT
TACGCATGGGGTCTGAACAGTTTCGGCGAAACGGGTATCAGGGCTGGTGC
CGGTGATGACGAAGCTGCGATTGTGCACCCCACCGTCGTGGATTCGCTAT
CTGGAAAAGCAGTCACACAAATCTGCGGCGGCGCCCATCATTCGCTTGCT
ATCGCTAATGATGGCGAGTGCCTTGTATGGGGACGATTGGATGGCTACCA
GACAGGTCTGAAAATCGATAGTCTAGCCGAGGATGCGGTCATCAAGGACG
AGCGTGGGCGGCCTCGTATCTTGATAGATCCCAAAGCTGTTCCTGGAGTC
AAGGCCATTGCTGTTGCAGCCGGTTCAGACCATTCACTCGTCATTGATGT
AGAGGGTCGTCCTTGGTCGTGGGGCTTTTCCGCCACCTATCAAACGGGCC
AAGGTACACCTGATGACATCGAAGTAGCGACTGTCATCGAGAATACTGCC
GTTCGTGGTAAGAAGTTAAACTGGGCAGGTGGTGGTGGTCAATTCTCTGT
GTTCACAGAGCCTGCAGCATTAGCATAAATGCCACCCAAGAAAAGCGCAC
CCAAGCCGGCTGCGGCATCAGCTGCGACGGCAAAGGGTAAACGGGCCACA
TCTACTACAACTACTACGACGAAGGCAGCTACGAAAGCAACTACAAAGGC
AACCACCAGAACAACAACGAAAGCGAATAAGACAACCGCCACGACCACTA
CTGCTCGCAAAGTTCCAATTGACAAGCGAGAGACCCCTTCGAAGCCCAAG
AAGACCACCAAGAGACAACCCGTGAAATCCACCACAGCTACCAAAGGTGG
AACAGTCGACAACCTTGCAAGCAAGAAGCATGAAGCTGAGCCTGCGAGAC
GTGAGAAGCGGAAAGCAGAAGTTATCGATGAAGCTCCTGCTCGCGATTTG
AAGAAAGCTCGTGTTGCTAAACCCCGGGTTACTAAACTGAAGCCGAAGGT
GGTCATCAACCATGCGCCAACCACTCGATTAAATGTCTATGTGTGCGGTG
AAGGCAGCTCAGGCGAGTTGGGGCTAGGATCTGCTAAGAATGCAGTTGAT
GTGAAGCGGCCTCGGTTGAATGCCAACTTGCCAGCGGACCGTGTCGGTGC
TGTCCAGGTCGCTGTTGGTGGCATGCATTGCGTTGCGCTTACGTATGACA
ACAGGATCCTTACATGGGGCGTCAACGATCAAGGAGCCCTTGGCAGAGAT
ACTGCTTGGGATGGTGGGTACAAAGATATCGACGAAGCCAACAATGGGTC
AGACTCGGAATCCGATGATGACATTGCTCTAAACCCCTACGAATCAACTC
CCACCGCTATTCCGTCAGAGGCTTTCCCGAAAGACACCGTCTTCGTTCAA
GTCGCTGCTGGCGACAGCTCAAGCTTTGCCCTTACAGATGATGGTCAAGT
TTATGGTTGGGGAACATTCAGAAGCAATGATGGTATCTTAGGTTTTGATG
CCGCCAATAAAGTCCAACATACGCCTAGTCTGATACCGTCTTTGAAGAAA
ATCAAACACCTGGCATGTGGCGATAATCACGTCTTAGCACTGAATGATAA
AGGTGCTGTGTTATCATGGGGTTCGGGTCAGCAAAACCAATTGGGCCGTC
GTATCATTGAGCGAAACAGGCTGAACGGTCTGCAGCCGCGCGAGTTTGGC
CTGCCGAAGAATATTGTGCATATTGGCTGTGGTGCTTTCCATTCATTCGC
TGTTCATCAGTCTGGAAAGGTTTACGCATGGGGTCTGAACAGTTTCGGCG
AAACGGGTATCAGGGCTGGTGCCGGTGATGACGAAGCTGCGATTGTGCAC
CCCACCGTCGTGGATTCGCTATCTGGAAAAGCAGTCACACAAATCTGCGG
CGGCGCCCATCATTCGCTTGCTATCGCTAATGATGGCGAGTGCCTTGTAT
GGGGACGATTGGATGGCTACCAGACAGGTCTGAAAATCGATAGTCTAGCC
GAGGATGCGGTCATCAAGGACGAGCGTGGGCGGCCTCGTATCTTGATAGA
TCCCAAAGCTGTTCCTGGAGTCAAGGCCATTGCTGTTGCAGCCGGTTCAG
ACCATTCACTCGTCATTGATGTAGAGGGTCGTCCTTGGTCGTGGGGCTTT
TCCGCCACCTATCAAACGGGCCAAGGTACACCTGATGACATCGAAGTAGC
GACTGTCATCGAGAATACTGCCGTTCGTGGTAAGAAGTTAAACTGGGCAG
GTGGTGGTGGTCAATTCTCTGTGTTCACAGAGCCTGCAGCATTAGCATAA
ATGCCACCCAAGAAAAGCGCACCCAAGCCGGCTGCGGCATCAGCTGCGAC
GGCAAAGGGTAAACGGGCCACATCTACTACAACTACTACGACGAAGGCAG
CTACGAAAGCAACTACAAAGGCAACCACCAGAACAACAACGAAAGCGAAT
AAGACAACCGCCACGACCACTACTGCTCGCAAAGTTCCAATTGACAAGCG
AGAGACCCCTTCGAAGCCCAAGAAGACCACCAAGAGACAACCCGTGAAAT
CCACCACAGCTACCAAAGGTGGAACAGTCGACAACCTTGCAAGCAAGAAG
CATGAAGCTGAGCCTGCGAGACGTGAGAAGCGGAAAGCAGAAGTTATCGA
TGAAGCTCCTGCTCGCGATTTGAAGAAAGCTCGTGTTGCTAAACCCCGGG
TTACTAAACTGAAGCCGAAGGTGGTCATCAACCATGCGCCAACCACTCGA
TTAAATGTCTATGTGTGCGGTGAAGGCAGCTCAGGCGAGTTGGGGCTAGG
ATCTGCTAAGAATGCAGTTGATGTGAAGCGGCCTCGGTTGAATGCCAACT
TGCCAGCGGACCGTGTCGGTGCTGTCCAGGTCGCTGTTGGTGGCATGCAT
TGCGTTGCGCTTACGTATGACAACAGGATCCTTACATGGGGCGTCAACGA
TCAAGGAGCCCTTGGCAGAGATACTGCTTGGGATGGTGGGTACAAAGATA
TCGACGAAGCCAACAATGGGTCAGACTCGGAATCCGATGATGACATTGCT
CTAAACCCCTACGAATCAACTCCCACCGCTATTCCGTCAGAGGCTTTCCC
GAAAGACACCGTCTTCGTTCAAGTCGCTGCTGGCGACAGCTCAAGCTTTG
CCCTTACAGATGATGGTCAAGTTTATGGTTGGGGAACATTCAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000768-T1.utr3p1 | KJC3_000768-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000768-T1.utr5p1 | KJC3_000768-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009091 |
| DBxref | InterPro:IPR000408 |
| DBxref | PFAM:PF13540 |
| DBxref | PFAM:PF00415 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1892522..1895155 - |
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