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KJC3_000783-T1, KJC3_000783-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000783-T1
Unique NameKJC3_000783-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1935241..1936991+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000783-T1 ID=KJC3_000783-T1|Name=KJC3_000783-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1751bp|location=Sequence derived from alignment at ch1:1935241..1936991+ (Aspergillus niger KJC3)
TATACATCATCACTTTCGCCCTCGCCGTTTGCTGGAGATTCTCTGACGGC
CTCCACATTCTCTCTAGCATATTCCGTCCGACGGTCTTTCGTCAACTTGC
TCGTCCTCTTGTCTAATATTCCTTTGTATTCCATCGCGCATCAATAATGG
GTTGGTTCTGGGCAGACTCTCAAGCAAAGCCCGCGCCCGCGGCTCCGCAC
CCCGTGCCATCTTCAGACGCCTCTCCTCCCGTGAGTAAAGATGCTACTTA
GACGCAATTTCGAGCGAGGAATCTGACGGATGCTTATAGCCAGGATGTCC
CATGCACGCATCTAACACCACGCCGGCAATGCCAGCCCCATCACCCACCT
CCGAGCCTCCCAGTGCCTGTCCGGTCCGGTCTACAGATTCCCCGTTCTAT
GTGCCTCCGAAGTCCAAGTCTCCGGAGTCGCAGCCTCCCTCCAACCCTAC
TACCAGCTCTGACACGCGATCTACTCTTTCAAAGCTAAACCCTCTCAACT
ACATGTTCGCCTCGATCTCCCAGGAAAGGGCGCCCAACCAGACCGTGGAT
CTTCCCGTGGAGCGAGAAGTTTCGTCTATCCCGAGATCCGATATGAATGA
GAACTGGGAATATCCTTCTCCTCAGCAGATGTACAACGCCATGCTGCGCA
AGGGTTATACCGATACCCCGCAGGATGCCGTTGAGGCCATGGTTGCTGTT
CACAACTTCTTGAATGAGGGCGCTTGGGAGGAGATTGTTCGGTGGGAGCG
TATATTTTCCAAGGGTCTGGCAGATGGCTGGGAAAAGTGCCGTCGCGGAG
AGGAGAACATCATGATGGACGAGTTTAAAGAGCAGATGTCCAGCGCTCCC
AAGCAGGATGTTCCTCCGCCGCGACTCATCCGGTTCCAGGGTCGCCCGCA
AGAGCTTACGCCCAAGGCACGGATCCTTCAGGCATTGGGCTGGGTGTATC
CTGCCAAGTTCGAGTCAGTACTCCCATTAGCTCCTGTTTCTTCTCTTCCG
TTCGAAAATTTTAAACTAACATTCGCCTGTTACTGTAGGTCAAACCCACC
CTTCGATCGCCACGATTGGTTCGTAATGCGACAGACGCCTTCCGGCCCTA
AGGAAGTCCGTTATGTTATTGACTACTATTCTGGTCCCCCCGAACCCACC
GGAGAGCCTGTTTTCTACTTGGATATCCGACCGGCCCTGGACACCCCAAC
TGCCGCCGTTGAGCGACTAATGAGATGGGGAGGAGATGTCTGGTGGCGTG
CCAGTGGCGCCTCTGTTCGGGAAAATTAAGTGACTGACTGATTGATCTAT
CAATCGGTTGATTGTCCTTAGCACCGCATGCCCGCGATCTTGGTCGACAG
CCGTTCAGCAGGATACTCTTGACACTCTGGGAAGGCGCAGGCGTCTGGTT
TCGGTTCTTCGTTCATTCTGTGGAACCGCCCTGCTATAGTATTCATGTTC
TTGTTCGTTCGGATCTCCTGGATTGCGCGCCCCTTTCTCTTCATTTCGGC
TATGTCTTTATTATAACGTCATGTGGATGCTGGAGTATCAAGGAAGTTCG
TCATCGTATTGGACGCCTGGGGTTATTTCTTTCTATCGGTTGCATGCTTT
GTCTGGGCTTAAACGCCCCCCCCCCCCCCCCCCCCCCTCTCTGCTCCACT
CTCTTTCCTTTTTGTGGAATCTGTCTTGATATCAATTATCTTGATCTGTA
ATATATATGAAACTACGCTGCCATCAAATCGTGGACGGTGATATGAAAGG
T
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Coding sequence (CDS) from alignment at ch1:1935241..1936991+

>KJC3_000783-T1 ID=KJC3_000783-T1|Name=KJC3_000783-T1|organism=Aspergillus niger KJC3|type=CDS|length=2997bp|location=Sequence derived from alignment at ch1:1935241..1936991+ (Aspergillus niger KJC3)
ATGGGTTGGTTCTGGGCAGACTCTCAAGCAAAGCCCGCGCCCGCGGCTCC
GCACCCCGTGCCATCTTCAGACGCCTCTCCTCCCCCAGGATGTCCCATGC
ACGCATCTAACACCACGCCGGCAATGCCAGCCCCATCACCCACCTCCGAG
CCTCCCAGTGCCTGTCCGGTCCGGTCTACAGATTCCCCGTTCTATGTGCC
TCCGAAGTCCAAGTCTCCGGAGTCGCAGCCTCCCTCCAACCCTACTACCA
GCTCTGACACGCGATCTACTCTTTCAAAGCTAAACCCTCTCAACTACATG
TTCGCCTCGATCTCCCAGGAAAGGGCGCCCAACCAGACCGTGGATCTTCC
CGTGGAGCGAGAAGTTTCGTCTATCCCGAGATCCGATATGAATGAGAACT
GGGAATATCCTTCTCCTCAGCAGATGTACAACGCCATGCTGCGCAAGGGT
TATACCGATACCCCGCAGGATGCCGTTGAGGCCATGGTTGCTGTTCACAA
CTTCTTGAATGAGGGCGCTTGGGAGGAGATTGTTCGGTGGGAGCGTATAT
TTTCCAAGGGTCTGGCAGATGGCTGGGAAAAGTGCCGTCGCGGAGAGGAG
AACATCATGATGGACGAGTTTAAAGAGCAGATGTCCAGCGCTCCCAAGCA
GGATGTTCCTCCGCCGCGACTCATCCGGTTCCAGGGTCGCCCGCAAGAGC
TTACGCCCAAGGCACGGATCCTTCAGGCATTGGGCTGGGTGTATCCTGCC
AAGTTCGAGTCAAACCCACCCTTCGATCGCCACGATTGGTTCGTAATGCG
ACAGACGCCTTCCGGCCCTAAGGAAGTCCGTTATGTTATTGACTACTATT
CTGGTCCCCCCGAACCCACCGGAGAGCCTGTTTTCTACTTGGATATCCGA
CCGGCCCTGGACACCCCAACTGCCGCCGTTGAGCGACTAATGAGATGGGG
AGGAGATGTCTGGTGGCGTGCCAGTGGCGCCTCTGTTCGGGAAAATTAAA
TGGGTTGGTTCTGGGCAGACTCTCAAGCAAAGCCCGCGCCCGCGGCTCCG
CACCCCGTGCCATCTTCAGACGCCTCTCCTCCCCCAGGATGTCCCATGCA
CGCATCTAACACCACGCCGGCAATGCCAGCCCCATCACCCACCTCCGAGC
CTCCCAGTGCCTGTCCGGTCCGGTCTACAGATTCCCCGTTCTATGTGCCT
CCGAAGTCCAAGTCTCCGGAGTCGCAGCCTCCCTCCAACCCTACTACCAG
CTCTGACACGCGATCTACTCTTTCAAAGCTAAACCCTCTCAACTACATGT
TCGCCTCGATCTCCCAGGAAAGGGCGCCCAACCAGACCGTGGATCTTCCC
GTGGAGCGAGAAGTTTCGTCTATCCCGAGATCCGATATGAATGAGAACTG
GGAATATCCTTCTCCTCAGCAGATGTACAACGCCATGCTGCGCAAGGGTT
ATACCGATACCCCGCAGGATGCCGTTGAGGCCATGGTTGCTGTTCACAAC
TTCTTGAATGAGGGCGCTTGGGAGGAGATTGTTCGGTGGGAGCGTATATT
TTCCAAGGGTCTGGCAGATGGCTGGGAAAAGTGCCGTCGCGGAGAGGAGA
ACATCATGATGGACGAGTTTAAAGAGCAGATGTCCAGCGCTCCCAAGCAG
GATGTTCCTCCGCCGCGACTCATCCGGTTCCAGGGTCGCCCGCAAGAGCT
TACGCCCAAGGCACGGATCCTTCAGGCATTGGGCTGGGTGTATCCTGCCA
AGTTCGAGTCAAACCCACCCTTCGATCGCCACGATTGGTTCGTAATGCGA
CAGACGCCTTCCGGCCCTAAGGAAGTCCGTTATGTTATTGACTACTATTC
TGGTCCCCCCGAACCCACCGGAGAGCCTGTTTTCTACTTGGATATCCGAC
CGGCCCTGGACACCCCAACTGCCGCCGTTGAGCGACTAATGAGATGGGGA
GGAGATGTCTGGTGGCGTGCCAGTGGCGCCTCTGTTCGGGAAAATTAAAT
GGGTTGGTTCTGGGCAGACTCTCAAGCAAAGCCCGCGCCCGCGGCTCCGC
ACCCCGTGCCATCTTCAGACGCCTCTCCTCCCCCAGGATGTCCCATGCAC
GCATCTAACACCACGCCGGCAATGCCAGCCCCATCACCCACCTCCGAGCC
TCCCAGTGCCTGTCCGGTCCGGTCTACAGATTCCCCGTTCTATGTGCCTC
CGAAGTCCAAGTCTCCGGAGTCGCAGCCTCCCTCCAACCCTACTACCAGC
TCTGACACGCGATCTACTCTTTCAAAGCTAAACCCTCTCAACTACATGTT
CGCCTCGATCTCCCAGGAAAGGGCGCCCAACCAGACCGTGGATCTTCCCG
TGGAGCGAGAAGTTTCGTCTATCCCGAGATCCGATATGAATGAGAACTGG
GAATATCCTTCTCCTCAGCAGATGTACAACGCCATGCTGCGCAAGGGTTA
TACCGATACCCCGCAGGATGCCGTTGAGGCCATGGTTGCTGTTCACAACT
TCTTGAATGAGGGCGCTTGGGAGGAGATTGTTCGGTGGGAGCGTATATTT
TCCAAGGGTCTGGCAGATGGCTGGGAAAAGTGCCGTCGCGGAGAGGAGAA
CATCATGATGGACGAGTTTAAAGAGCAGATGTCCAGCGCTCCCAAGCAGG
ATGTTCCTCCGCCGCGACTCATCCGGTTCCAGGGTCGCCCGCAAGAGCTT
ACGCCCAAGGCACGGATCCTTCAGGCATTGGGCTGGGTGTATCCTGCCAA
GTTCGAGTCAAACCCACCCTTCGATCGCCACGATTGGTTCGTAATGCGAC
AGACGCCTTCCGGCCCTAAGGAAGTCCGTTATGTTATTGACTACTATTCT
GGTCCCCCCGAACCCACCGGAGAGCCTGTTTTCTACTTGGATATCCGACC
GGCCCTGGACACCCCAACTGCCGCCGTTGAGCGACTAATGAGATGGGGAG
GAGATGTCTGGTGGCGTGCCAGTGGCGCCTCTGTTCGGGAAAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0004408holocytochrome-c synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CYT2_1KJC3_000783Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000783-T1KJC3_000783-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000783-T1.utr5p1KJC3_000783-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000783-T1.exon1KJC3_000783-T1.exon1Aspergillus niger KJC3exon
KJC3_000783-T1.exon2KJC3_000783-T1.exon2Aspergillus niger KJC3exon
KJC3_000783-T1.exon3KJC3_000783-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000783-T1.cdsKJC3_000783-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000783-T1.utr3p1KJC3_000783-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000511
DBxrefPFAM:PF01265
ProductCytochrome c1 heme lyase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1935241..1936991 +
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