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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1943238..1944354+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000786-T1 ID=KJC3_000786-T1|Name=KJC3_000786-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1117bp|location=Sequence derived from alignment at ch1:1943238..1944354+ (Aspergillus niger KJC3)
CCTCATTCTAAACCCGGGCAACCTTGTAACATCACATTGTCCTTTTCTAC
TTTTACTCTCTTTTACTTAATTCTACCAGACCTTCCCTGCAACTTTACAC
CAACATCACCATGACTCGTGCCCAGCAGACTCTCTCCGTTCTCCTACTTG
TCTCCTCGGTATGCTACTAGCTCCGTCTAACACGCTGTACAATTGTCGCA
ACCAATATCACTAACCAGCATAACTTCCAAAACTCCAGCTCTACTTAGTC
CTCTACCTTGGCCTCGTCCCTCTCAACGAAACAGTCCAGACTGAAGTCAT
CCCTGTTGTACGTTCCTCATCGCTCACCTCCGCGACCAACAATCCCCCTC
CTCCTCCCATCTACAATATCTCCGATTCACAATTCCACACTTACAGCTTG
CTAATCATCGCACCTTGTCACTCACAGCTCCCATTCTACGCGCTAATATG
TTTTGGCTGTTATCTTCTCGGCCGGCTGGGTCTGGCCATCCTGACATTCA
ATGACGTGCCCGAGGCGCATGACGAGCTACAGAAGGAGATCGAACAGGCC
AAGGCCGAACTGCGCAGAGCGAATGTCGACGTCGATTAAATAACAGTGAA
CCCCCTTCACTTCCCAATACCATATCAGTTTTTTCTTGTTGATTCGGCTG
GTTTGTGCAATATGGTGGTCTGGTTTTCCTGGATGGGGGCGGGTTATTAC
TACTAGCTCCTTGCAATGTTAGGTTTTCCTGGGGCAAAAAGGGCCCTTGG
AGCCTTGTTTATTTTCTGATCTGTATGTGGAAGTGTGTTTTACCCCATTG
AACTACTGAAGTAAACTGTTATCTTAGTCTGAGTAATTGGGTTTCCAGCG
GTCGAGTTCGATTTGGTATGTTTGTATGTCTATGCATGGCACGTGTATTA
TTATGGAATTACTGTTGTTGCAGCTGTGGGTGTTGGTTTGTCGTGGTAGG
AATTCTCCCCCAGGGCTGGGAATTCTCTGAGTTATGACATATTACCATCT
AGGTACTATGTTGAGCGCCAGGAAAGAAACGGGTTGTTTCGAATTCTGCG
TAAGCGAACCTGAATTGCAACTATCCTTAATTGCAATACCGGTCCCTGTC
AAAGATATGCAGGCGCT back to topCoding sequence (CDS) from alignment at ch1:1943238..1944354+ >KJC3_000786-T1 ID=KJC3_000786-T1|Name=KJC3_000786-T1|organism=Aspergillus niger KJC3|type=CDS|length=837bp|location=Sequence derived from alignment at ch1:1943238..1944354+ (Aspergillus niger KJC3)
ATGACTCGTGCCCAGCAGACTCTCTCCGTTCTCCTACTTGTCTCCTCGCT
CTACTTAGTCCTCTACCTTGGCCTCGTCCCTCTCAACGAAACAGTCCAGA
CTGAAGTCATCCCTGTTCTCCCATTCTACGCGCTAATATGTTTTGGCTGT
TATCTTCTCGGCCGGCTGGGTCTGGCCATCCTGACATTCAATGACGTGCC
CGAGGCGCATGACGAGCTACAGAAGGAGATCGAACAGGCCAAGGCCGAAC
TGCGCAGAGCGAATGTCGACGTCGATTAAATGACTCGTGCCCAGCAGACT
CTCTCCGTTCTCCTACTTGTCTCCTCGCTCTACTTAGTCCTCTACCTTGG
CCTCGTCCCTCTCAACGAAACAGTCCAGACTGAAGTCATCCCTGTTCTCC
CATTCTACGCGCTAATATGTTTTGGCTGTTATCTTCTCGGCCGGCTGGGT
CTGGCCATCCTGACATTCAATGACGTGCCCGAGGCGCATGACGAGCTACA
GAAGGAGATCGAACAGGCCAAGGCCGAACTGCGCAGAGCGAATGTCGACG
TCGATTAAATGACTCGTGCCCAGCAGACTCTCTCCGTTCTCCTACTTGTC
TCCTCGCTCTACTTAGTCCTCTACCTTGGCCTCGTCCCTCTCAACGAAAC
AGTCCAGACTGAAGTCATCCCTGTTCTCCCATTCTACGCGCTAATATGTT
TTGGCTGTTATCTTCTCGGCCGGCTGGGTCTGGCCATCCTGACATTCAAT
GACGTGCCCGAGGCGCATGACGAGCTACAGAAGGAGATCGAACAGGCCAA
GGCCGAACTGCGCAGAGCGAATGTCGACGTCGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006486 | protein glycosylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000786-T1.utr5p1 | KJC3_000786-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013174 |
| DBxref | PFAM:PF08285 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1943238..1944354 + |
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