|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1944395..1945850- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000787-T1 ID=KJC3_000787-T1|Name=KJC3_000787-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1456bp|location=Sequence derived from alignment at ch1:1944395..1945850- (Aspergillus niger KJC3) AAAAATTTCTGGGATCCAATCTACCCCTCATATGTGATCTTGCCATCTCC
GTACTCATTAGTATCTTCACCTATCCATCTCACTTGTACACCCCCCTCAC
CTCGGGTCAAGCCTCTTGATCATCTCCAACTCTACTACTTATCATATATC
CTCAATCGGTCAATTCCTGCGAACCCCTCGCACCCGCCGTCAAAATGCCG
CAGAAGGTTTATGTCACGTACAACCAGGTATGCAGTTGCCTTTGAAATCT
CTACATTTCCCTTTCAATCCCTTGCAGCCACATGTAGATGATCGTGGGGT
TTCGTGCTTGTGTGAGGGCTTGTCTGCCATTAACGGCCTAGCATGCACAT
ACTTCTCTGGTTCATTTGGCCACATGCCCACGTCGCAGCCTAGCTTGGCC
GTCGCACACTCGTCCGTTCACTTGAAAAACAATCCGCTAACATCCGAATG
TCCTTGGCAGGTTCACAAACTATGCCAGGCCTCCGCTGACAAGATCCTGG
ACACCTTCCAGCCCAATCTTATGATTGCTATCGGCGGTGGTGGCTACATC
CCTGCCCGCATTCTCCGGTTCGTCGGATCAAAACCACAACTTGATTTTGG
AACCCGTTTCTGACGCATATCCTTCACACAGCTCTTTCCTGAAGCGCCCC
GGCGAGCCTAACATTCCCATTCAGGCCATCGGTCTTTCGCTTTACGAGGA
CCTGGGCCGCGGTGACGCCGAAGAAGTCCCCGGAACCAAGGTTACCCGCA
CACAATGGCTGGACCTTAGCTCTCTGGAAATGGCCAACCTCATTGGCAAG
AACATTCTCATTGTTGACGAAGTCGACGATACCCGTACGACCCTCGAATA
TGCCGTCCGCGAGCTCCAGAAGGATGTCGAGATTGCGCAGAAGCAGCTCG
GCCGTGAAGGCGAGAAGACAAACTTCTTCGTCTACGTTGTTCACGTACGT
TTATCATTACGATATATCAATTTCGCCGAACCTATCGTCTCCACATGACT
AACAATCTCTTCAGAATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAG
GATATGATGACCTCTGGCCGTTACCACGCATCCGTGACCACCGCTGATGT
TTGGATCTGCTATCCTTGGGAAGCTAAGTACGTCATCCGATACAGTACCA
GGCTTGGAAGTCCCAATGCTAACATATACATTTCACAGGGACATTGACGA
GCACGACAGACTAGCTGAGGAGAACCCTCTCGTCTGAGCTTCTACTCAGC
GCGATTTTGCTCTCGCTTAGCCACATTTTTACCTCGTCTCTTCGTCCTGG
TTATGCCGCCCACGCATAGATACCGGCTCTCTTTGGTTGCATATATGTTG
CGTCCCCCCCTTAGACATTTGAAGAAGAGTTTTGCATGTTTCGGGTTTGC
TACGGAAAGGTGTTTTGATGGGTTTATTTGATAGAACAAAAGCAGTTTTG
GTACCA back to topCoding sequence (CDS) from alignment at ch1:1944395..1945850- >KJC3_000787-T1 ID=KJC3_000787-T1|Name=KJC3_000787-T1|organism=Aspergillus niger KJC3|type=CDS|length=3075bp|location=Sequence derived from alignment at ch1:1944395..1945850- (Aspergillus niger KJC3) GGACATTGACGAGCACGACAGACTAGCTGAGGAGAACCCTCTCGTCTGAA ATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAGGATATGATGACCTCT GGCCGTTACCACGCATCCGTGACCACCGCTGATGTTTGGATCTGCTATCC TTGGGAAGCTAACTCTTTCCTGAAGCGCCCCGGCGAGCCTAACATTCCCA TTCAGGCCATCGGTCTTTCGCTTTACGAGGACCTGGGCCGCGGTGACGCC GAAGAAGTCCCCGGAACCAAGGTTACCCGCACACAATGGCTGGACCTTAG CTCTCTGGAAATGGCCAACCTCATTGGCAAGAACATTCTCATTGTTGACG AAGTCGACGATACCCGTACGACCCTCGAATATGCCGTCCGCGAGCTCCAG AAGGATGTCGAGATTGCGCAGAAGCAGCTCGGCCGTGAAGGCGAGAAGAC AAACTTCTTCGTCTACGTTGTTCACGTTCACAAACTATGCCAGGCCTCCG CTGACAAGATCCTGGACACCTTCCAGCCCAATCTTATGATTGCTATCGGC GGTGGTGGCTACATCCCTGCCCGCATTCTCCGATGCCGCAGAAGGTTTAT GTCACGTACAACCAGGGACATTGACGAGCACGACAGACTAGCTGAGGAGA ACCCTCTCGTCTGAAATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAG GATATGATGACCTCTGGCCGTTACCACGCATCCGTGACCACCGCTGATGT TTGGATCTGCTATCCTTGGGAAGCTAACTCTTTCCTGAAGCGCCCCGGCG AGCCTAACATTCCCATTCAGGCCATCGGTCTTTCGCTTTACGAGGACCTG GGCCGCGGTGACGCCGAAGAAGTCCCCGGAACCAAGGTTACCCGCACACA ATGGCTGGACCTTAGCTCTCTGGAAATGGCCAACCTCATTGGCAAGAACA TTCTCATTGTTGACGAAGTCGACGATACCCGTACGACCCTCGAATATGCC GTCCGCGAGCTCCAGAAGGATGTCGAGATTGCGCAGAAGCAGCTCGGCCG TGAAGGCGAGAAGACAAACTTCTTCGTCTACGTTGTTCACGTTCACAAAC TATGCCAGGCCTCCGCTGACAAGATCCTGGACACCTTCCAGCCCAATCTT ATGATTGCTATCGGCGGTGGTGGCTACATCCCTGCCCGCATTCTCCGATG CCGCAGAAGGTTTATGTCACGTACAACCAGGGACATTGACGAGCACGACA GACTAGCTGAGGAGAACCCTCTCGTCTGAAATAAGGACAAGCCGAAGAAG GGTGTCTTGCCGGAGGATATGATGACCTCTGGCCGTTACCACGCATCCGT GACCACCGCTGATGTTTGGATCTGCTATCCTTGGGAAGCTAACTCTTTCC TGAAGCGCCCCGGCGAGCCTAACATTCCCATTCAGGCCATCGGTCTTTCG CTTTACGAGGACCTGGGCCGCGGTGACGCCGAAGAAGTCCCCGGAACCAA GGTTACCCGCACACAATGGCTGGACCTTAGCTCTCTGGAAATGGCCAACC TCATTGGCAAGAACATTCTCATTGTTGACGAAGTCGACGATACCCGTACG ACCCTCGAATATGCCGTCCGCGAGCTCCAGAAGGATGTCGAGATTGCGCA GAAGCAGCTCGGCCGTGAAGGCGAGAAGACAAACTTCTTCGTCTACGTTG TTCACGTTCACAAACTATGCCAGGCCTCCGCTGACAAGATCCTGGACACC TTCCAGCCCAATCTTATGATTGCTATCGGCGGTGGTGGCTACATCCCTGC CCGCATTCTCCGATGCCGCAGAAGGTTTATGTCACGTACAACCAGGGACA TTGACGAGCACGACAGACTAGCTGAGGAGAACCCTCTCGTCTGAAATAAG GACAAGCCGAAGAAGGGTGTCTTGCCGGAGGATATGATGACCTCTGGCCG TTACCACGCATCCGTGACCACCGCTGATGTTTGGATCTGCTATCCTTGGG AAGCTAACTCTTTCCTGAAGCGCCCCGGCGAGCCTAACATTCCCATTCAG GCCATCGGTCTTTCGCTTTACGAGGACCTGGGCCGCGGTGACGCCGAAGA AGTCCCCGGAACCAAGGTTACCCGCACACAATGGCTGGACCTTAGCTCTC TGGAAATGGCCAACCTCATTGGCAAGAACATTCTCATTGTTGACGAAGTC GACGATACCCGTACGACCCTCGAATATGCCGTCCGCGAGCTCCAGAAGGA TGTCGAGATTGCGCAGAAGCAGCTCGGCCGTGAAGGCGAGAAGACAAACT TCTTCGTCTACGTTGTTCACGTTCACAAACTATGCCAGGCCTCCGCTGAC AAGATCCTGGACACCTTCCAGCCCAATCTTATGATTGCTATCGGCGGTGG TGGCTACATCCCTGCCCGCATTCTCCGATGCCGCAGAAGGTTTATGTCAC GTACAACCAGGGACATTGACGAGCACGACAGACTAGCTGAGGAGAACCCT CTCGTCTGAAATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAGGATAT GATGACCTCTGGCCGTTACCACGCATCCGTGACCACCGCTGATGTTTGGA TCTGCTATCCTTGGGAAGCTAACTCTTTCCTGAAGCGCCCCGGCGAGCCT AACATTCCCATTCAGGCCATCGGTCTTTCGCTTTACGAGGACCTGGGCCG CGGTGACGCCGAAGAAGTCCCCGGAACCAAGGTTACCCGCACACAATGGC TGGACCTTAGCTCTCTGGAAATGGCCAACCTCATTGGCAAGAACATTCTC ATTGTTGACGAAGTCGACGATACCCGTACGACCCTCGAATATGCCGTCCG CGAGCTCCAGAAGGATGTCGAGATTGCGCAGAAGCAGCTCGGCCGTGAAG GCGAGAAGACAAACTTCTTCGTCTACGTTGTTCACGTTCACAAACTATGC CAGGCCTCCGCTGACAAGATCCTGGACACCTTCCAGCCCAATCTTATGAT TGCTATCGGCGGTGGTGGCTACATCCCTGCCCGCATTCTCCGATGCCGCA GAAGGTTTATGTCACGTACAACCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0009116 | nucleoside metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_000787-T1.utr3p1 | KJC3_000787-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_000787-T1.utr5p1 | KJC3_000787-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR000836 |
DBxref | InterPro:IPR029057 |
Product | hypoxanthine-guanine phosphoribosyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:1944395..1945850 - |
|