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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1962502..1963714- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000794-T1 ID=KJC3_000794-T1|Name=KJC3_000794-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1213bp|location=Sequence derived from alignment at ch1:1962502..1963714- (Aspergillus niger KJC3)
GGGATAGAGAAGCGTCCGTGGGCAGCGCATCTCCAAACATCAACAACATC
CACTGCGTTGCCGGTTTGCACTGTTTGCAGACCCGGGGTTATGACATAAC
CGCCGCTTTCTCATCTTCTTCTGCCATCTCTTTCCGATCTTCCTCTTCTT
CCTGTTGCGACTCCAGCTTCACCATGGACGCTCCTTGTCTGGCGATTCGC
TCGTCCCTCCTCAGACGTTGCCATGTCTGTCTTTCCGGCTCGCGCATACC
CGATGCATCTCGATTGACCCGACCACGTGCCGTCACTCCATTCATTCGCC
GCTCCAGCACCCGCAGATATGCCACCGTCCAAGACACACAGGCGGGTAAT
GTGAGTGACTCGAAATCTCGTCAGGCGCATCCACTATCAGGCTATTATTA
TGATATTTTGTCCACCCGCTCGCCCTACCGACACCACGCAACAACCGATT
CCAAGACGGAAGAGCCCAAGCCGGAGGCGCAAACACCACAGGAAAAGATG
GCCATTGTCTTCGGCACTCGGTTAGCTGGTCCCGGCCGGTCCTCACGCTA
CGATCCCGGTTCCGCACCGGATACAACGTGGAAAACCATAAACGGGGTGG
CTATCCCTCCTCGACCGGAAGAGCCCGACAATTGCTGCATGAGTGGCTGC
GTCCACTGCGTATGGGACGATTTTCGAGACGAGCTGGAGGACTGGGCCTT
CAGGCTTGAACAAGCCAAGGCGAAGGGTGCGACCAAAAGTAATGCCTCGG
ATATGCGACATACTCCACGAGCGGAAGTCAACTCAGCCAGCATGAGCATG
GATGACGATGGTGGTGGCAGTGAGACCAATTGGTCGGCGCCTACTTCGGA
CGATGACTTGTTTGCGAGCATCCCTGTGGGGATTCGAGAGTTTATGAAGA
CGGAGAAGAAACTGAAGCAACGGCATCAACAGGAATCGGCGTGAATTGAT
GTCCACACTATTTCTTCTTGCTTGGTGACCCTTTCTCTTCTGGAATTCGA
ATACCCTTGTGTGATGATTGATGTCGATTATTTGGTGTTTGGACTACGTT
TGTACATAGATCATACTACTACTTTCTTAGATGTAGACTGTATATAAGTT
GCACTGTCATAGCATTGCTCAGTGATTATATATGTTTGAAGTGATGGGGA
ATCGTGATGCTCCTAAAGCGAGTTAACATTCACACCACAGAACTATAATA
ACCCAATTGAGAG back to topCoding sequence (CDS) from alignment at ch1:1962502..1963714- >KJC3_000794-T1 ID=KJC3_000794-T1|Name=KJC3_000794-T1|organism=Aspergillus niger KJC3|type=CDS|length=771bp|location=Sequence derived from alignment at ch1:1962502..1963714- (Aspergillus niger KJC3)
ATGGACGCTCCTTGTCTGGCGATTCGCTCGTCCCTCCTCAGACGTTGCCA
TGTCTGTCTTTCCGGCTCGCGCATACCCGATGCATCTCGATTGACCCGAC
CACGTGCCGTCACTCCATTCATTCGCCGCTCCAGCACCCGCAGATATGCC
ACCGTCCAAGACACACAGGCGGGTAATGTGAGTGACTCGAAATCTCGTCA
GGCGCATCCACTATCAGGCTATTATTATGATATTTTGTCCACCCGCTCGC
CCTACCGACACCACGCAACAACCGATTCCAAGACGGAAGAGCCCAAGCCG
GAGGCGCAAACACCACAGGAAAAGATGGCCATTGTCTTCGGCACTCGGTT
AGCTGGTCCCGGCCGGTCCTCACGCTACGATCCCGGTTCCGCACCGGATA
CAACGTGGAAAACCATAAACGGGGTGGCTATCCCTCCTCGACCGGAAGAG
CCCGACAATTGCTGCATGAGTGGCTGCGTCCACTGCGTATGGGACGATTT
TCGAGACGAGCTGGAGGACTGGGCCTTCAGGCTTGAACAAGCCAAGGCGA
AGGGTGCGACCAAAAGTAATGCCTCGGATATGCGACATACTCCACGAGCG
GAAGTCAACTCAGCCAGCATGAGCATGGATGACGATGGTGGTGGCAGTGA
GACCAATTGGTCGGCGCCTACTTCGGACGATGACTTGTTTGCGAGCATCC
CTGTGGGGATTCGAGAGTTTATGAAGACGGAGAAGAAACTGAAGCAACGG
CATCAACAGGAATCGGCGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000794-T1.utr3p1 | KJC3_000794-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000794-T1.utr5p1 | KJC3_000794-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019180 |
| DBxref | PFAM:PF09791 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1962502..1963714 - |
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