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KJC3_000796-T1, KJC3_000796-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000796-T1
Unique NameKJC3_000796-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1966112..1968042-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000796-T1 ID=KJC3_000796-T1|Name=KJC3_000796-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1931bp|location=Sequence derived from alignment at ch1:1966112..1968042- (Aspergillus niger KJC3)
AAAGCCGTTCTGCCACGGAGAAAGTCTGGGGGTGACCTTCCGAAACGGGT
AAGCAGGGTAGGGCTCGCTAAGCGAGGCGATGCGGCTCTGCGCGGTTGGC
CACACCAAAAAAAGTTCCACCTAATAGTGAGACGAGGAGTTTTGAGATAC
GACCAGCAACCACCCACGACGACGACGACAATCTCCCGGCCTTGATCCCC
ATCCGTCACAATGGTGCGTTATTCTATCCAATATTGCTCAAATGGCGTCG
CTAGATGGTCATTTTGATGATCGGGCGCTATTTTTTTTTTACAAAAGACC
CAATATGCTGACCTGGGACCTCGTGGTGGATATAGGCGATCAAGCACAAC
AACCAGATTCTCAACCAGCGTGAGTGAACCTGCTCGAGGAAGGATGCGAT
GGTGGATTGTTTAATATATCGGGTTACAACTGGCCGGCTGGAATAATATG
GACTGATGGGTTTCGATTTCAGACTTCCACAAGGACTGGCAGCGTCGTGT
GCGCGTGCACTTCGACCAGGTACGCTTTCGAAAGTAAAACCTTTACCCAA
CCGATTCCTATCTACAACGAGCGACTCGCCTTTTGGAAAAGAATACGGGA
GGGGAAAATTTTTTCCTATGTGCGTGGTGGACTGACATGTGTTTTTTTCT
GCTTCAATAGCCTGGCCGCAAGCACCGCCGTCGTGAGGCCCGTCTCGCTA
AGGCCGCCGCTGTTGCTCCTCGTCCGGTTGACCAGCTGCGCCCCGTTGTG
CGCTGCCCTACCGTCAAGTACAACCGCCGTGTCCGTGCTGGCCGTGGTTT
CACCCTTGCTGAGCTGAAGGTAAATTTCGTCCCTTGTGTGCAATTCGATG
TCACCAGAAACAAGAAAGGGTGATGGCGATTGGAAAAGAAAGCCCTGGCG
ACTGGGCAGGATGCAAATAAACGGACGGAGGCTTACACGATTATTTTTTT
TTTCGCACTATAGGAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCG
GTATCGCCGTTGACCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTC
GCCAATGTTGCTCGCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCC
CCGCAAGAGCGGTCAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCA
ACGCTGCCAAGGCTGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACC
CGTGTCGGTGGTGCCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGT
CACCGAGGTCAAGCGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACC
GCCGGCTGCGTGAGGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAG
AAGCGTGCTAAGGCCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAGAT
TTCTTGAATCACAGCTAATGATGATCGGGTCAATTTTCAAGTCGGGGATT
AGTACCTTGTGTGGCATGGCGTCGCTCCTCTATTTTCCGTTTTCACCTTT
GTCCTTAACATAAAAAGCTCCGAAACCCCCTCGAAATGCAAATGTCCCAA
ATTTTCATGTCCTGAGAAAGCTACTAGCTCTCCCCTAACGCGAATGAAGT
GAAGACCCTCCACCCTATTTGTCGTCTTTTCTTTATGTTCCTTCCGGGAC
GATTTTGCCCATTCGATCTATCTACCGAAGGACGCGGGAACCGAGCCTCA
GCCTTCGGGTTCACCTCACAATACCCACTTGAATACGGTAAACTTGAAGC
ACGCAGAGGCACGGAGCAAGCTAGTGTACAAACGCGATGATATACGGAGT
ATAATTATGTGATCCCGTCGATATTTTGTAGATGTTAGTCCGTAATTCTG
ACTTCCTTTTGGACGGTATATGCGCATAACTGTCATGCAGCTTAGCTTGT
CTGATAAGATCTTTGCATATAATCCTACGGT
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Coding sequence (CDS) from alignment at ch1:1966112..1968042-

>KJC3_000796-T1 ID=KJC3_000796-T1|Name=KJC3_000796-T1|organism=Aspergillus niger KJC3|type=CDS|length=3390bp|location=Sequence derived from alignment at ch1:1966112..1968042- (Aspergillus niger KJC3)
GAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCGGTATCGCCGTTGA
CCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTCGCCAATGTTGCTC
GCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCCCCGCAAGAGCGGT
CAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCAACGCTGCCAAGGC
TGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACCCGTGTCGGTGGTG
CCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGTCACCGAGGTCAAG
CGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACCGCCGGCTGCGTGA
GGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAGAAGCGTGCTAAGG
CCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAGCCTGGCCGCAAGCAC
CGCCGTCGTGAGGCCCGTCTCGCTAAGGCCGCCGCTGTTGCTCCTCGTCC
GGTTGACCAGCTGCGCCCCGTTGTGCGCTGCCCTACCGTCAAGTACAACC
GCCGTGTCCGTGCTGGCCGTGGTTTCACCCTTGCTGAGCTGAAGACTTCC
ACAAGGACTGGCAGCGTCGTGTGCGCGTGCACTTCGACCAGGCGATCAAG
CACAACAACCAGATTCTCAACCAGCATGGAAGCTGGTATCCCCAAGAAGC
TCGCTCGCACCGTCGGTATCGCCGTTGACCACCGCCGTGTCAACTACTCC
AAGGAGTCGCTCGTCGCCAATGTTGCTCGCCTCCAGGACTACAAGGCCCG
CCTGATCCTCTTCCCCCGCAAGAGCGGTCAGTTCAAGAAGCTTGACTCTT
CCGCTGAGGAGGTCAACGCTGCCAAGGCTGCTTTCGCCGAGGGCAAGACC
GAGGGCTTCGCCACCCGTGTCGGTGGTGCCCTCCCCATCAAGAACGCCAC
TCTCGAGGAGGCTGTCACCGAGGTCAAGCGTGACGACCTTCCCAAGGGCG
AGGAGGCTGCTTACCGCCGGCTGCGTGAGGCCCGCAGCGAGGCCCGCTAC
AAGGGTATCCGGGAGAAGCGTGCTAAGGCCAAGGCTGAGGAGGAGTCTGC
CGCTAAGAAATAGCCTGGCCGCAAGCACCGCCGTCGTGAGGCCCGTCTCG
CTAAGGCCGCCGCTGTTGCTCCTCGTCCGGTTGACCAGCTGCGCCCCGTT
GTGCGCTGCCCTACCGTCAAGTACAACCGCCGTGTCCGTGCTGGCCGTGG
TTTCACCCTTGCTGAGCTGAAGACTTCCACAAGGACTGGCAGCGTCGTGT
GCGCGTGCACTTCGACCAGGCGATCAAGCACAACAACCAGATTCTCAACC
AGCATGGAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCGGTATCGC
CGTTGACCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTCGCCAATG
TTGCTCGCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCCCCGCAAG
AGCGGTCAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCAACGCTGC
CAAGGCTGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACCCGTGTCG
GTGGTGCCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGTCACCGAG
GTCAAGCGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACCGCCGGCT
GCGTGAGGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAGAAGCGTG
CTAAGGCCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAGCCTGGCCGC
AAGCACCGCCGTCGTGAGGCCCGTCTCGCTAAGGCCGCCGCTGTTGCTCC
TCGTCCGGTTGACCAGCTGCGCCCCGTTGTGCGCTGCCCTACCGTCAAGT
ACAACCGCCGTGTCCGTGCTGGCCGTGGTTTCACCCTTGCTGAGCTGAAG
ACTTCCACAAGGACTGGCAGCGTCGTGTGCGCGTGCACTTCGACCAGGCG
ATCAAGCACAACAACCAGATTCTCAACCAGCATGGAAGCTGGTATCCCCA
AGAAGCTCGCTCGCACCGTCGGTATCGCCGTTGACCACCGCCGTGTCAAC
TACTCCAAGGAGTCGCTCGTCGCCAATGTTGCTCGCCTCCAGGACTACAA
GGCCCGCCTGATCCTCTTCCCCCGCAAGAGCGGTCAGTTCAAGAAGCTTG
ACTCTTCCGCTGAGGAGGTCAACGCTGCCAAGGCTGCTTTCGCCGAGGGC
AAGACCGAGGGCTTCGCCACCCGTGTCGGTGGTGCCCTCCCCATCAAGAA
CGCCACTCTCGAGGAGGCTGTCACCGAGGTCAAGCGTGACGACCTTCCCA
AGGGCGAGGAGGCTGCTTACCGCCGGCTGCGTGAGGCCCGCAGCGAGGCC
CGCTACAAGGGTATCCGGGAGAAGCGTGCTAAGGCCAAGGCTGAGGAGGA
GTCTGCCGCTAAGAAATAGCCTGGCCGCAAGCACCGCCGTCGTGAGGCCC
GTCTCGCTAAGGCCGCCGCTGTTGCTCCTCGTCCGGTTGACCAGCTGCGC
CCCGTTGTGCGCTGCCCTACCGTCAAGTACAACCGCCGTGTCCGTGCTGG
CCGTGGTTTCACCCTTGCTGAGCTGAAGACTTCCACAAGGACTGGCAGCG
TCGTGTGCGCGTGCACTTCGACCAGGCGATCAAGCACAACAACCAGATTC
TCAACCAGCATGGAAGCTGGTATCCCCAAGAAGCTCGCTCGCACCGTCGG
TATCGCCGTTGACCACCGCCGTGTCAACTACTCCAAGGAGTCGCTCGTCG
CCAATGTTGCTCGCCTCCAGGACTACAAGGCCCGCCTGATCCTCTTCCCC
CGCAAGAGCGGTCAGTTCAAGAAGCTTGACTCTTCCGCTGAGGAGGTCAA
CGCTGCCAAGGCTGCTTTCGCCGAGGGCAAGACCGAGGGCTTCGCCACCC
GTGTCGGTGGTGCCCTCCCCATCAAGAACGCCACTCTCGAGGAGGCTGTC
ACCGAGGTCAAGCGTGACGACCTTCCCAAGGGCGAGGAGGCTGCTTACCG
CCGGCTGCGTGAGGCCCGCAGCGAGGCCCGCTACAAGGGTATCCGGGAGA
AGCGTGCTAAGGCCAAGGCTGAGGAGGAGTCTGCCGCTAAGAAATAGCCT
GGCCGCAAGCACCGCCGTCGTGAGGCCCGTCTCGCTAAGGCCGCCGCTGT
TGCTCCTCGTCCGGTTGACCAGCTGCGCCCCGTTGTGCGCTGCCCTACCG
TCAAGTACAACCGCCGTGTCCGTGCTGGCCGTGGTTTCACCCTTGCTGAG
CTGAAGACTTCCACAAGGACTGGCAGCGTCGTGTGCGCGTGCACTTCGAC
CAGGCGATCAAGCACAACAACCAGATTCTCAACCAGCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000796KJC3_000796Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000796-T1KJC3_000796-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000796-T1.cdsKJC3_000796-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000796-T1.utr3p1KJC3_000796-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000796-T1.exon5KJC3_000796-T1.exon5Aspergillus niger KJC3exon
KJC3_000796-T1.exon4KJC3_000796-T1.exon4Aspergillus niger KJC3exon
KJC3_000796-T1.exon3KJC3_000796-T1.exon3Aspergillus niger KJC3exon
KJC3_000796-T1.exon2KJC3_000796-T1.exon2Aspergillus niger KJC3exon
KJC3_000796-T1.exon1KJC3_000796-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000796-T1.utr5p1KJC3_000796-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018256
DBxrefInterPro:IPR001380
DBxrefPFAM:PF01294
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1966112..1968042 -
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