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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1980713..1981923+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000801-T1 ID=KJC3_000801-T1|Name=KJC3_000801-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1211bp|location=Sequence derived from alignment at ch1:1980713..1981923+ (Aspergillus niger KJC3)
ATGCCGGAAATCAAGATGACCGCATTTAACGTCAAAGATCTGGCCGCGCG
CGCTGCCCAGCGCATCGCGGAACACCGCCAGAAGGCTGAGGCCCGTGGCA
GCACTTTCAGCACGGAGCCATTGCCAATGGATCGTGTCTCGAGTGTGGAC
GCCAATTCAATGAGGACCATGTCACATAGCGAAGACGAACACCGCCACAA
GTCGAAGATGAGCCGGCTTGTGCAGAAGGTTCGAGGGCGGTTCTCAAAGC
GTCTGGCGAAGAGGGAGGTAATCGACGAGTAAGTACCCCTCTCGATACAC
ACCCAAGCCTTCTTCTGGGTAATGGCGCTAACTCACTTTATAGACCCTGC
GCATGCTGCTTGGATATCATGCCTGCCGAATGCCTGATCAGCATGCCCTG
TCAGCACAAGTACTGCAGCAGATGCTTGAAGAAGTTGGTGTTCACAGTTA
TGCCGGAGGAAGGACTGTTCCCACCCAGATGCTGCAAGCAGAAGATCCCG
ACAGAGGTCATCCTTCCCGTGCTAACACCGAAGGAGAGGACGGTCTATTT
TGCCAAGGTGCAGGAGTATGCGACCCCAGCCAGAGAACGCTGGTACTGTC
CTGCGCCGACGTGCGGCCGGTTCATTCCACCGAAGCATCTGAACAGCAAG
CTCTCGTCCCAAAGCTGCCCATACTGCAGCACGACGTTTTGCTCTGGCTG
CAGATGCCCGGGGTATAATAATAGTACCTCGACTGGGAAGAAAGATCCAG
GATTCATGGCCGTCTTCGAAGATCCGCGACTTGGTAAAGCACAGAGGGGT
CTCAAATGTGGCTCTTTGGTGGACCTCTTGTTCAATTGTGATCATGTTAC
GTGCCGGTGCAAGGCACAAGTCTGGTAAGTCCCCCCTTCAGCTGCCCACA
CATAGTGTATCTAGACATCCTAACCGAGAAGTAGTAACCTCTGTCGCAAT
CCATGGCTGTCATGTACCTGCGCCAAGCCAGGCCAACGCCCCATCGACTT
CCTCACCTTCATCATCGGCCACAGCGGCGTAAACAAAGACCAGGAGGCCG
AACTTGCCGCAGTGGTGGCTGCCATCCTATGCAACGAAAGGCTGCGGGAT
GAAGAATTGGCAAAGACCCAAGGCATGAAGGAGAAAGGGGGAAGCGCTAA
CAGAAGTCGGGCGAGTCTGCTGATACCACAGCAGGCGACTCGGGCTAGGA
GGGTTTCCTAG back to topCoding sequence (CDS) from alignment at ch1:1980713..1981923+ >KJC3_000801-T1 ID=KJC3_000801-T1|Name=KJC3_000801-T1|organism=Aspergillus niger KJC3|type=CDS|length=3258bp|location=Sequence derived from alignment at ch1:1980713..1981923+ (Aspergillus niger KJC3)
ATGCCGGAAATCAAGATGACCGCATTTAACGTCAAAGATCTGGCCGCGCG
CGCTGCCCAGCGCATCGCGGAACACCGCCAGAAGGCTGAGGCCCGTGGCA
GCACTTTCAGCACGGAGCCATTGCCAATGGATCGTGTCTCGAGTGTGGAC
GCCAATTCAATGAGGACCATGTCACATAGCGAAGACGAACACCGCCACAA
GTCGAAGATGAGCCGGCTTGTGCAGAAGGTTCGAGGGCGGTTCTCAAAGC
GTCTGGCGAAGAGGGAGGTAATCGACGAACCCTGCGCATGCTGCTTGGAT
ATCATGCCTGCCGAATGCCTGATCAGCATGCCCTGTCAGCACAAGTACTG
CAGCAGATGCTTGAAGAAGTTGGTGTTCACAGTTATGCCGGAGGAAGGAC
TGTTCCCACCCAGATGCTGCAAGCAGAAGATCCCGACAGAGGTCATCCTT
CCCGTGCTAACACCGAAGGAGAGGACGGTCTATTTTGCCAAGGTGCAGGA
GTATGCGACCCCAGCCAGAGAACGCTGGTACTGTCCTGCGCCGACGTGCG
GCCGGTTCATTCCACCGAAGCATCTGAACAGCAAGCTCTCGTCCCAAAGC
TGCCCATACTGCAGCACGACGTTTTGCTCTGGCTGCAGATGCCCGGGGTA
TAATAATAGTACCTCGACTGGGAAGAAAGATCCAGGATTCATGGCCGTCT
TCGAAGATCCGCGACTTGGTAAAGCACAGAGGGGTCTCAAATGTGGCTCT
TTGGTGGACCTCTTGTTCAATTGTGATCATGTTACGTGCCGGTGCAAGGC
ACAAGTCTGTAACCTCTGTCGCAATCCATGGCTGTCATGTACCTGCGCCA
AGCCAGGCCAACGCCCCATCGACTTCCTCACCTTCATCATCGGCCACAGC
GGCGTAAACAAAGACCAGGAGGCCGAACTTGCCGCAGTGGTGGCTGCCAT
CCTATGCAACGAAAGGCTGCGGGATGAAGAATTGGCAAAGACCCAAGGCA
TGAAGGAGAAAGGGGGAAGCGCTAACAGAAGTCGGGCGAGTCTGCTGATA
CCACAGCAGGCGACTCGGGCTAGGAGGGTTTCCTAGATGCCGGAAATCAA
GATGACCGCATTTAACGTCAAAGATCTGGCCGCGCGCGCTGCCCAGCGCA
TCGCGGAACACCGCCAGAAGGCTGAGGCCCGTGGCAGCACTTTCAGCACG
GAGCCATTGCCAATGGATCGTGTCTCGAGTGTGGACGCCAATTCAATGAG
GACCATGTCACATAGCGAAGACGAACACCGCCACAAGTCGAAGATGAGCC
GGCTTGTGCAGAAGGTTCGAGGGCGGTTCTCAAAGCGTCTGGCGAAGAGG
GAGGTAATCGACGAACCCTGCGCATGCTGCTTGGATATCATGCCTGCCGA
ATGCCTGATCAGCATGCCCTGTCAGCACAAGTACTGCAGCAGATGCTTGA
AGAAGTTGGTGTTCACAGTTATGCCGGAGGAAGGACTGTTCCCACCCAGA
TGCTGCAAGCAGAAGATCCCGACAGAGGTCATCCTTCCCGTGCTAACACC
GAAGGAGAGGACGGTCTATTTTGCCAAGGTGCAGGAGTATGCGACCCCAG
CCAGAGAACGCTGGTACTGTCCTGCGCCGACGTGCGGCCGGTTCATTCCA
CCGAAGCATCTGAACAGCAAGCTCTCGTCCCAAAGCTGCCCATACTGCAG
CACGACGTTTTGCTCTGGCTGCAGATGCCCGGGGTATAATAATAGTACCT
CGACTGGGAAGAAAGATCCAGGATTCATGGCCGTCTTCGAAGATCCGCGA
CTTGGTAAAGCACAGAGGGGTCTCAAATGTGGCTCTTTGGTGGACCTCTT
GTTCAATTGTGATCATGTTACGTGCCGGTGCAAGGCACAAGTCTGTAACC
TCTGTCGCAATCCATGGCTGTCATGTACCTGCGCCAAGCCAGGCCAACGC
CCCATCGACTTCCTCACCTTCATCATCGGCCACAGCGGCGTAAACAAAGA
CCAGGAGGCCGAACTTGCCGCAGTGGTGGCTGCCATCCTATGCAACGAAA
GGCTGCGGGATGAAGAATTGGCAAAGACCCAAGGCATGAAGGAGAAAGGG
GGAAGCGCTAACAGAAGTCGGGCGAGTCTGCTGATACCACAGCAGGCGAC
TCGGGCTAGGAGGGTTTCCTAGATGCCGGAAATCAAGATGACCGCATTTA
ACGTCAAAGATCTGGCCGCGCGCGCTGCCCAGCGCATCGCGGAACACCGC
CAGAAGGCTGAGGCCCGTGGCAGCACTTTCAGCACGGAGCCATTGCCAAT
GGATCGTGTCTCGAGTGTGGACGCCAATTCAATGAGGACCATGTCACATA
GCGAAGACGAACACCGCCACAAGTCGAAGATGAGCCGGCTTGTGCAGAAG
GTTCGAGGGCGGTTCTCAAAGCGTCTGGCGAAGAGGGAGGTAATCGACGA
ACCCTGCGCATGCTGCTTGGATATCATGCCTGCCGAATGCCTGATCAGCA
TGCCCTGTCAGCACAAGTACTGCAGCAGATGCTTGAAGAAGTTGGTGTTC
ACAGTTATGCCGGAGGAAGGACTGTTCCCACCCAGATGCTGCAAGCAGAA
GATCCCGACAGAGGTCATCCTTCCCGTGCTAACACCGAAGGAGAGGACGG
TCTATTTTGCCAAGGTGCAGGAGTATGCGACCCCAGCCAGAGAACGCTGG
TACTGTCCTGCGCCGACGTGCGGCCGGTTCATTCCACCGAAGCATCTGAA
CAGCAAGCTCTCGTCCCAAAGCTGCCCATACTGCAGCACGACGTTTTGCT
CTGGCTGCAGATGCCCGGGGTATAATAATAGTACCTCGACTGGGAAGAAA
GATCCAGGATTCATGGCCGTCTTCGAAGATCCGCGACTTGGTAAAGCACA
GAGGGGTCTCAAATGTGGCTCTTTGGTGGACCTCTTGTTCAATTGTGATC
ATGTTACGTGCCGGTGCAAGGCACAAGTCTGTAACCTCTGTCGCAATCCA
TGGCTGTCATGTACCTGCGCCAAGCCAGGCCAACGCCCCATCGACTTCCT
CACCTTCATCATCGGCCACAGCGGCGTAAACAAAGACCAGGAGGCCGAAC
TTGCCGCAGTGGTGGCTGCCATCCTATGCAACGAAAGGCTGCGGGATGAA
GAATTGGCAAAGACCCAAGGCATGAAGGAGAAAGGGGGAAGCGCTAACAG
AAGTCGGGCGAGTCTGCTGATACCACAGCAGGCGACTCGGGCTAGGAGGG
TTTCCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR002867 |
| DBxref | PFAM:PF01485 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1980713..1981923 + |
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