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KJC3_000804-T1, KJC3_000804-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000804-T1
Unique NameKJC3_000804-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1988058..1989454+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000804-T1 ID=KJC3_000804-T1|Name=KJC3_000804-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1397bp|location=Sequence derived from alignment at ch1:1988058..1989454+ (Aspergillus niger KJC3)
TCAGAACTCATAACACAGTAAGCCATCTTCTGTGCTTTGCAGTGCAGATG
ACGCTGGTCTCCAAAACTCGTGAATCACAGTTCTCACCTTCCCAAGATCC
AAAGCCGTACTACATACATTATGCCTGATCGGGTAACTCGCAGATCCTTT
CTTGCCAGTTCTCTTCAAGTTCTCAAATGTGCATTTAGAGGTCGTCGTAG
CCGCTCAGGCAACATGAACACCCAAGCCAGCCACAGCAACCGCAACCAGG
ACACTCTTAGCAAAAGCACGATCAGCGAATTGACCTGTCTTCAACCACCA
AACACACCCCAAACATCAATATCTACCACAGAAACCGGCTCATCGGCATC
CACACCAACCAAGAAGCTTCGTTCTGTACGTGGAGAACGAATCAGGCGAG
CAGTGATGCTACCTCCAGACACAACAGATGCTGGAAAGCCTTCCACTCAA
GCAGAGGAGGAAGGACAAGAAAGCCTTGGAGACTGTAATGAAGAATTGAA
CTCCGTATCCTACAAGGAGGACGAAAGACAATCTCTAACCCTACATGAAT
CCTCGCTCCCTGCCCCCCACCAGGCTGCCAGTGAAAAGGCTCATCATGCC
AATTATTCTAGACTTCCCACTCCTGTCAAACCACCGACCTCGAATCTGTA
TTCGCATGAGATCTACCAACATGAAGCGAGACGGAGTGTGCTTTCCTCTT
TGGGGGGCCCTCATGCTGCTGGAAAACGGTATGAGGTGGGGAATCCGAAG
TCTGGTTCATCAGAGGATAGTCCTGGAGTATGCAGTCGAAGCAGCAGTAT
GCATGATGGCCGTACCAGAGCATCGGAGCAGAAACCATCAGGCTTACCAC
TCCCGCAGCGAGGCCACAGCAGTGAGCGAGTCCAAACAAGAAAAACCAAT
GTACTTCCGACTTCAACGCGCGGCCATGGTAGCAGCAAGCCAGACAATGC
TCGCAAGTCGCTTCCAGTGATGGTTACCAGTCGACCATCAAATCGGGTAT
TGAGCCGGAAGGAGGTGTCCCATAGCAGAGCCGAGATGCAGGCAAATGCA
GACTCAAGCTCAAGCTCAGATCCTTTGAGCACCCATGCAGCAGATGCGCC
CCAATCATGCTCAGGAGAGCACCGGACAGACAGACAGCAGTTCTTGCGAT
TGATACAGATTGAGGACAATCTTGGTCTTGGCTTGCAAATGCAGTCACGC
GATCATCATTCAGATACAACGCCCACATCAGAAGCAGAGCTGGCGAGATC
GAGTCTAAGGGCGCTGCCGAGGCGGGTTCGGTTAACGAATAAATTTGAGA
ACCTGCGGGCACAGAATGCAGACAAAAAGGAGAAGGAGAAGGAGGAGAAG
CAGCCTGGAAACGCAGCAGTGCAGTCTTTCTTGAAATTGAATTGACC
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Coding sequence (CDS) from alignment at ch1:1988058..1989454+

>KJC3_000804-T1 ID=KJC3_000804-T1|Name=KJC3_000804-T1|organism=Aspergillus niger KJC3|type=CDS|length=1182bp|location=Sequence derived from alignment at ch1:1988058..1989454+ (Aspergillus niger KJC3)
ATGAACACCCAAGCCAGCCACAGCAACCGCAACCAGGACACTCTTAGCAA
AAGCACGATCAGCGAATTGACCTGTCTTCAACCACCAAACACACCCCAAA
CATCAATATCTACCACAGAAACCGGCTCATCGGCATCCACACCAACCAAG
AAGCTTCGTTCTGTACGTGGAGAACGAATCAGGCGAGCAGTGATGCTACC
TCCAGACACAACAGATGCTGGAAAGCCTTCCACTCAAGCAGAGGAGGAAG
GACAAGAAAGCCTTGGAGACTGTAATGAAGAATTGAACTCCGTATCCTAC
AAGGAGGACGAAAGACAATCTCTAACCCTACATGAATCCTCGCTCCCTGC
CCCCCACCAGGCTGCCAGTGAAAAGGCTCATCATGCCAATTATTCTAGAC
TTCCCACTCCTGTCAAACCACCGACCTCGAATCTGTATTCGCATGAGATC
TACCAACATGAAGCGAGACGGAGTGTGCTTTCCTCTTTGGGGGGCCCTCA
TGCTGCTGGAAAACGGTATGAGGTGGGGAATCCGAAGTCTGGTTCATCAG
AGGATAGTCCTGGAGTATGCAGTCGAAGCAGCAGTATGCATGATGGCCGT
ACCAGAGCATCGGAGCAGAAACCATCAGGCTTACCACTCCCGCAGCGAGG
CCACAGCAGTGAGCGAGTCCAAACAAGAAAAACCAATGTACTTCCGACTT
CAACGCGCGGCCATGGTAGCAGCAAGCCAGACAATGCTCGCAAGTCGCTT
CCAGTGATGGTTACCAGTCGACCATCAAATCGGGTATTGAGCCGGAAGGA
GGTGTCCCATAGCAGAGCCGAGATGCAGGCAAATGCAGACTCAAGCTCAA
GCTCAGATCCTTTGAGCACCCATGCAGCAGATGCGCCCCAATCATGCTCA
GGAGAGCACCGGACAGACAGACAGCAGTTCTTGCGATTGATACAGATTGA
GGACAATCTTGGTCTTGGCTTGCAAATGCAGTCACGCGATCATCATTCAG
ATACAACGCCCACATCAGAAGCAGAGCTGGCGAGATCGAGTCTAAGGGCG
CTGCCGAGGCGGGTTCGGTTAACGAATAAATTTGAGAACCTGCGGGCACA
GAATGCAGACAAAAAGGAGAAGGAGAAGGAGGAGAAGCAGCCTGGAAACG
CAGCAGTGCAGTCTTTCTTGAAATTGAATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000804KJC3_000804Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000804-T1KJC3_000804-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000804-T1.utr5p1KJC3_000804-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000804-T1.utr5p2KJC3_000804-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000804-T1.utr5p3KJC3_000804-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000804-T1.exon1KJC3_000804-T1.exon1Aspergillus niger KJC3exon
KJC3_000804-T1.exon2KJC3_000804-T1.exon2Aspergillus niger KJC3exon
KJC3_000804-T1.exon3KJC3_000804-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000804-T1.cdsKJC3_000804-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000804-T1.utr3p1KJC3_000804-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1988058..1989454 +
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