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KJC3_000807-T1, KJC3_000807-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000807-T1
Unique NameKJC3_000807-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1996107..1997538+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000807-T1 ID=KJC3_000807-T1|Name=KJC3_000807-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1432bp|location=Sequence derived from alignment at ch1:1996107..1997538+ (Aspergillus niger KJC3)
CTCTACTCATATCTACTTAACAGTCAACTCTCACCGCTGCCTCAATTTCC
GTTGCTTTGAAGATGACTACCTTGCGTTTTGTTCGCTCTGTAAGTTACAT
ACCTTGTGTTGTACTCTACTTTGATCTTATGCCTGTACTCACAAAATCCG
CAGGTTTGGGAGTCCTTTCGGGCTACTTCGGGGCTAGAGCCTCGGTAAGT
GATAGAAGAAAGAGTGCTTCCTTCATGCCTGTCCTGGATTCAAATCACTG
ATGGGAATGCATGGGATGGTTATCTAGTCTACTAGACAATGTAAGCTTCT
CGAGTTGGAATATACAACCATCATATTCCGGGAATATCTTCAATGGATTC
ACCTTACGGCTGAAGCTTCACTCTATCGGTCCCGGGGACACCCGTCGATA
CCGGCTAAACGCTTCGGAACACTATACTAACATTCGAGTCTATCGCGCCA
GCTTCGTGTGACTGCTGCCAAACCTGGGTTAGTCAACTTTGAACTCGATA
TCAAGAAGGAGCACACGGTAAGCCAGAGATTCGAAAATGGTTACTTGGTA
ACTGACAATCATCAGAACCGCCTGAACATCCTCCATGGCGGTACCATTGC
CAGCATGGGTGGGCCACATGCCAACACCGTCTCACATTGAATGTCCTTGC
TAACATGAATTAATGCAAAGTGGACCTTGGTGGCTCCCTGGCTGTTGCTT
CTCGTGGTTTGTTCGCGACAGGCGTCTCGACTGACCTGAACGGTGAGCAG
ATAGCAACTTCTACTTTCACCGAAGACCCCCTAATAAATCATACAGTGAC
GTATCTCAGTTCTGGTGGTAAAGTAGGAGACAGGATCCTAGCGGTAGGTT
TTTCCTGCTTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGT
GTGTGTAGTCATGACAATAGAGGGGAAAAGCATGTCCAGGCTAACCCACT
GCATGTGTAACAGGAAGTCAGCTGTGATAAATGTAGGTTCCCTGAACACA
CTTGATACGCTGCATATACTTACAGTCATCTGCAGTTGGCAAGACCCTTG
CATACACGTCGATTAAATTCGCCAACACTAAAGGAGAAGTCTTCGCCAGA
GGAAGCCACACCAAGTAAGTATACGCATACAAATATATATTCTTTCTGCC
CTCAGAAGAAAACCAATGGACTGATTTCCTATCAGATTTGTCGCTCTCGC
ATGGAAAGACCCTCAAAACATCGTTGAGGAGATCAACAAGCTCGAGTCCT
CGTCATCTTAGGTAGTTACTACTACACATGTCAGGTGTGTCGATTCAGGC
GAGCTTTTTGTTAGCTATTATAGCAACTACTAGCCTCTTCTTCGGCCGGA
CACGATAGAGCACATGGATTAGAACGGGGTATAGAGATTTTGTATATATA
TAAAGCGATACTACATAGCCAATTCTACAGGC
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Coding sequence (CDS) from alignment at ch1:1996107..1997538+

>KJC3_000807-T1 ID=KJC3_000807-T1|Name=KJC3_000807-T1|organism=Aspergillus niger KJC3|type=CDS|length=4779bp|location=Sequence derived from alignment at ch1:1996107..1997538+ (Aspergillus niger KJC3)
ATGACTACCTTGCGTTTTGTTCGCTCTGTTTGGGAGTCCTTTCGGGCTAC
TTCGGGGCTAGAGCCTCGTCTACTAGACAATCTTCGTGTGACTGCTGCCA
AACCTGGGTTAGTCAACTTTGAACTCGATATCAAGAAGGAGCACACGGTA
AGCCAGAGATTCGAAAATGGTTACTTGGTAACTGACAATCATCAGAACCG
CCTGAACATCCTCCATGGCGGTACCATTGCCAGCATGGTGGACCTTGGTG
GCTCCCTGGCTGTTGCTTCTCGTGGTTTGTTCGCGACAGGCGTCTCGACT
GACCTGAACGTGACGTATCTCAGTTCTGGTGGTAAAGTAGGAGACAGGAT
CCTAGCGGAAGTCAGCTGTGATAAATTTGGCAAGACCCTTGCATACACGT
CGATTAAATTCGCCAACACTAAAGGAGAAGTCTTCGCCAGAGGAAGCCAC
ACCAAATTTGTCGCTCTCGCATGGAAAGACCCTCAAAACATCGTTGAGGA
GATCAACAAGCTCGAGTCCTCGTCATCTTAGATGACTACCTTGCGTTTTG
TTCGCTCTGTTTGGGAGTCCTTTCGGGCTACTTCGGGGCTAGAGCCTCGT
CTACTAGACAATCTTCGTGTGACTGCTGCCAAACCTGGGTTAGTCAACTT
TGAACTCGATATCAAGAAGGAGCACACGGTAAGCCAGAGATTCGAAAATG
GTTACTTGGTAACTGACAATCATCAGAACCGCCTGAACATCCTCCATGGC
GGTACCATTGCCAGCATGGTGGACCTTGGTGGCTCCCTGGCTGTTGCTTC
TCGTGGTTTGTTCGCGACAGGCGTCTCGACTGACCTGAACGTGACGTATC
TCAGTTCTGGTGGTAAAGTAGGAGACAGGATCCTAGCGGAAGTCAGCTGT
GATAAATTTGGCAAGACCCTTGCATACACGTCGATTAAATTCGCCAACAC
TAAAGGAGAAGTCTTCGCCAGAGGAAGCCACACCAAATTTGTCGCTCTCG
CATGGAAAGACCCTCAAAACATCGTTGAGGAGATCAACAAGCTCGAGTCC
TCGTCATCTTAGATGACTACCTTGCGTTTTGTTCGCTCTGTTTGGGAGTC
CTTTCGGGCTACTTCGGGGCTAGAGCCTCGTCTACTAGACAATCTTCGTG
TGACTGCTGCCAAACCTGGGTTAGTCAACTTTGAACTCGATATCAAGAAG
GAGCACACGGTAAGCCAGAGATTCGAAAATGGTTACTTGGTAACTGACAA
TCATCAGAACCGCCTGAACATCCTCCATGGCGGTACCATTGCCAGCATGG
TGGACCTTGGTGGCTCCCTGGCTGTTGCTTCTCGTGGTTTGTTCGCGACA
GGCGTCTCGACTGACCTGAACGTGACGTATCTCAGTTCTGGTGGTAAAGT
AGGAGACAGGATCCTAGCGGAAGTCAGCTGTGATAAATTTGGCAAGACCC
TTGCATACACGTCGATTAAATTCGCCAACACTAAAGGAGAAGTCTTCGCC
AGAGGAAGCCACACCAAATTTGTCGCTCTCGCATGGAAAGACCCTCAAAA
CATCGTTGAGGAGATCAACAAGCTCGAGTCCTCGTCATCTTAGATGACTA
CCTTGCGTTTTGTTCGCTCTGTTTGGGAGTCCTTTCGGGCTACTTCGGGG
CTAGAGCCTCGTCTACTAGACAATCTTCGTGTGACTGCTGCCAAACCTGG
GTTAGTCAACTTTGAACTCGATATCAAGAAGGAGCACACGGTAAGCCAGA
GATTCGAAAATGGTTACTTGGTAACTGACAATCATCAGAACCGCCTGAAC
ATCCTCCATGGCGGTACCATTGCCAGCATGGTGGACCTTGGTGGCTCCCT
GGCTGTTGCTTCTCGTGGTTTGTTCGCGACAGGCGTCTCGACTGACCTGA
ACGTGACGTATCTCAGTTCTGGTGGTAAAGTAGGAGACAGGATCCTAGCG
GAAGTCAGCTGTGATAAATTTGGCAAGACCCTTGCATACACGTCGATTAA
ATTCGCCAACACTAAAGGAGAAGTCTTCGCCAGAGGAAGCCACACCAAAT
TTGTCGCTCTCGCATGGAAAGACCCTCAAAACATCGTTGAGGAGATCAAC
AAGCTCGAGTCCTCGTCATCTTAGATGACTACCTTGCGTTTTGTTCGCTC
TGTTTGGGAGTCCTTTCGGGCTACTTCGGGGCTAGAGCCTCGTCTACTAG
ACAATCTTCGTGTGACTGCTGCCAAACCTGGGTTAGTCAACTTTGAACTC
GATATCAAGAAGGAGCACACGGTAAGCCAGAGATTCGAAAATGGTTACTT
GGTAACTGACAATCATCAGAACCGCCTGAACATCCTCCATGGCGGTACCA
TTGCCAGCATGGTGGACCTTGGTGGCTCCCTGGCTGTTGCTTCTCGTGGT
TTGTTCGCGACAGGCGTCTCGACTGACCTGAACGTGACGTATCTCAGTTC
TGGTGGTAAAGTAGGAGACAGGATCCTAGCGGAAGTCAGCTGTGATAAAT
TTGGCAAGACCCTTGCATACACGTCGATTAAATTCGCCAACACTAAAGGA
GAAGTCTTCGCCAGAGGAAGCCACACCAAATTTGTCGCTCTCGCATGGAA
AGACCCTCAAAACATCGTTGAGGAGATCAACAAGCTCGAGTCCTCGTCAT
CTTAGATGACTACCTTGCGTTTTGTTCGCTCTGTTTGGGAGTCCTTTCGG
GCTACTTCGGGGCTAGAGCCTCGTCTACTAGACAATCTTCGTGTGACTGC
TGCCAAACCTGGGTTAGTCAACTTTGAACTCGATATCAAGAAGGAGCACA
CGGTAAGCCAGAGATTCGAAAATGGTTACTTGGTAACTGACAATCATCAG
AACCGCCTGAACATCCTCCATGGCGGTACCATTGCCAGCATGGTGGACCT
TGGTGGCTCCCTGGCTGTTGCTTCTCGTGGTTTGTTCGCGACAGGCGTCT
CGACTGACCTGAACGTGACGTATCTCAGTTCTGGTGGTAAAGTAGGAGAC
AGGATCCTAGCGGAAGTCAGCTGTGATAAATTTGGCAAGACCCTTGCATA
CACGTCGATTAAATTCGCCAACACTAAAGGAGAAGTCTTCGCCAGAGGAA
GCCACACCAAATTTGTCGCTCTCGCATGGAAAGACCCTCAAAACATCGTT
GAGGAGATCAACAAGCTCGAGTCCTCGTCATCTTAGATGACTACCTTGCG
TTTTGTTCGCTCTGTTTGGGAGTCCTTTCGGGCTACTTCGGGGCTAGAGC
CTCGTCTACTAGACAATCTTCGTGTGACTGCTGCCAAACCTGGGTTAGTC
AACTTTGAACTCGATATCAAGAAGGAGCACACGGTAAGCCAGAGATTCGA
AAATGGTTACTTGGTAACTGACAATCATCAGAACCGCCTGAACATCCTCC
ATGGCGGTACCATTGCCAGCATGGTGGACCTTGGTGGCTCCCTGGCTGTT
GCTTCTCGTGGTTTGTTCGCGACAGGCGTCTCGACTGACCTGAACGTGAC
GTATCTCAGTTCTGGTGGTAAAGTAGGAGACAGGATCCTAGCGGAAGTCA
GCTGTGATAAATTTGGCAAGACCCTTGCATACACGTCGATTAAATTCGCC
AACACTAAAGGAGAAGTCTTCGCCAGAGGAAGCCACACCAAATTTGTCGC
TCTCGCATGGAAAGACCCTCAAAACATCGTTGAGGAGATCAACAAGCTCG
AGTCCTCGTCATCTTAGATGACTACCTTGCGTTTTGTTCGCTCTGTTTGG
GAGTCCTTTCGGGCTACTTCGGGGCTAGAGCCTCGTCTACTAGACAATCT
TCGTGTGACTGCTGCCAAACCTGGGTTAGTCAACTTTGAACTCGATATCA
AGAAGGAGCACACGGTAAGCCAGAGATTCGAAAATGGTTACTTGGTAACT
GACAATCATCAGAACCGCCTGAACATCCTCCATGGCGGTACCATTGCCAG
CATGGTGGACCTTGGTGGCTCCCTGGCTGTTGCTTCTCGTGGTTTGTTCG
CGACAGGCGTCTCGACTGACCTGAACGTGACGTATCTCAGTTCTGGTGGT
AAAGTAGGAGACAGGATCCTAGCGGAAGTCAGCTGTGATAAATTTGGCAA
GACCCTTGCATACACGTCGATTAAATTCGCCAACACTAAAGGAGAAGTCT
TCGCCAGAGGAAGCCACACCAAATTTGTCGCTCTCGCATGGAAAGACCCT
CAAAACATCGTTGAGGAGATCAACAAGCTCGAGTCCTCGTCATCTTAGAT
GACTACCTTGCGTTTTGTTCGCTCTGTTTGGGAGTCCTTTCGGGCTACTT
CGGGGCTAGAGCCTCGTCTACTAGACAATCTTCGTGTGACTGCTGCCAAA
CCTGGGTTAGTCAACTTTGAACTCGATATCAAGAAGGAGCACACGGTAAG
CCAGAGATTCGAAAATGGTTACTTGGTAACTGACAATCATCAGAACCGCC
TGAACATCCTCCATGGCGGTACCATTGCCAGCATGGTGGACCTTGGTGGC
TCCCTGGCTGTTGCTTCTCGTGGTTTGTTCGCGACAGGCGTCTCGACTGA
CCTGAACGTGACGTATCTCAGTTCTGGTGGTAAAGTAGGAGACAGGATCC
TAGCGGAAGTCAGCTGTGATAAATTTGGCAAGACCCTTGCATACACGTCG
ATTAAATTCGCCAACACTAAAGGAGAAGTCTTCGCCAGAGGAAGCCACAC
CAAATTTGTCGCTCTCGCATGGAAAGACCCTCAAAACATCGTTGAGGAGA
TCAACAAGCTCGAGTCCTCGTCATCTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000807KJC3_000807Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000807-T1KJC3_000807-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000807-T1.utr5p1KJC3_000807-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000807-T1.exon1KJC3_000807-T1.exon1Aspergillus niger KJC3exon
KJC3_000807-T1.exon2KJC3_000807-T1.exon2Aspergillus niger KJC3exon
KJC3_000807-T1.exon3KJC3_000807-T1.exon3Aspergillus niger KJC3exon
KJC3_000807-T1.exon4KJC3_000807-T1.exon4Aspergillus niger KJC3exon
KJC3_000807-T1.exon5KJC3_000807-T1.exon5Aspergillus niger KJC3exon
KJC3_000807-T1.exon6KJC3_000807-T1.exon6Aspergillus niger KJC3exon
KJC3_000807-T1.exon7KJC3_000807-T1.exon7Aspergillus niger KJC3exon
KJC3_000807-T1.exon8KJC3_000807-T1.exon8Aspergillus niger KJC3exon
KJC3_000807-T1.exon9KJC3_000807-T1.exon9Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000807-T1.cdsKJC3_000807-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000807-T1.utr3p1KJC3_000807-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR006683
DBxrefPFAM:PF03061
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1996107..1997538 +
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