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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2031627..2032697- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000817-T1 ID=KJC3_000817-T1|Name=KJC3_000817-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1071bp|location=Sequence derived from alignment at ch1:2031627..2032697- (Aspergillus niger KJC3)
ATGTCCCCCTCAGCCGAAACTCTCCCGACACAGGAGTCTACTCCTCAATC
CACCACCACCACCACAACCACCCCCCAAGAACCTATTCCCCATGACCCAA
CCCACGAAGAACACCAATACCTAAACCTGATCCGCCGCATCCTCAGCGAA
GGCGAGCACCGCCCCGACCGCACGGGCACCGGAACCCGCTCGATCTTCGC
CCCTCCACAGATGCGCTTCTCGCTCTCCAAACCCTCCACCAACACGACCA
CCGGAATCAAAGAATACACCCCGATCCTCCCCCTCCTCACCACCAAGCGC
GTCTTCCTGCGCGCCGTCCTCGCCGAACTCCTCTGGTTCATCTCCGGCAC
GACCTCCTCCCTGCCCCTCAGCGAAGCCGGGATCAAAATCTGGGATGGCA
ATGGCTCCCGCGAATACCTCGACAAAGTCGGTCTTTCGCACCGCGAAGTC
GGCGACCTCGGTCCCGTGTACGGCTTCCAGTGGAGACATTTCGGGGCGGA
ATATGTCGACGCCAAGACGGATTACTCTGGTCAGGGTGTCGATCAGTTAG
CCGAGGTGGTCAAGAAATTGAAGGAGAACCCGTTCGATCGCAGAATTATT
ATGTCTGCGTGGAATCCTAAGGATATGAGGATTATGGCCCTGCCGCCGTG
TCATATGTTTGCGCAGTTTTATGTCCGCTTTCCCGATGCGAAGAGGGATG
AGGAGGGTGTTGTGAGGGATGGGGAGTGGGGAAGGGGCCATTTGGATTGT
TTGTTGTATCAGAGGAGTGCGGATATGGGCCTCGGGGTGCCGTTTAATAT
TGCTTCTTATGCGTTGTTGACGCATTTGTTGGCCCATGCCGTGGATATGG
TTCCCGGGACATTGGTGCATACGTTGGGCGATGCGCATGTTTATTTGGAT
CATGTCGATGCGTTGAAGGAGCAGATTGAGCGCGAGCCGGTGGCGTTTCC
GGAGGTGAGGATCAAGAGGGAAGATCGGGGTAGTGGGGTCGTTGATGGTT
GGAAAGAGGAGGAGTTTGAGGTGATTGGGTATAAGCCGCATAAGGCGATT
AAGATGAAGATGAGCGTGTAG back to topCoding sequence (CDS) from alignment at ch1:2031627..2032697- >KJC3_000817-T1 ID=KJC3_000817-T1|Name=KJC3_000817-T1|organism=Aspergillus niger KJC3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch1:2031627..2032697- (Aspergillus niger KJC3)
ATGTCCCCCTCAGCCGAAACTCTCCCGACACAGGAGTCTACTCCTCAATC
CACCACCACCACCACAACCACCCCCCAAGAACCTATTCCCCATGACCCAA
CCCACGAAGAACACCAATACCTAAACCTGATCCGCCGCATCCTCAGCGAA
GGCGAGCACCGCCCCGACCGCACGGGCACCGGAACCCGCTCGATCTTCGC
CCCTCCACAGATGCGCTTCTCGCTCTCCAAACCCTCCACCAACACGACCA
CCGGAATCAAAGAATACACCCCGATCCTCCCCCTCCTCACCACCAAGCGC
GTCTTCCTGCGCGCCGTCCTCGCCGAACTCCTCTGGTTCATCTCCGGCAC
GACCTCCTCCCTGCCCCTCAGCGAAGCCGGGATCAAAATCTGGGATGGCA
ATGGCTCCCGCGAATACCTCGACAAAGTCGGTCTTTCGCACCGCGAAGTC
GGCGACCTCGGTCCCGTGTACGGCTTCCAGTGGAGACATTTCGGGGCGGA
ATATGTCGACGCCAAGACGGATTACTCTGGTCAGGGTGTCGATCAGTTAG
CCGAGGTGGTCAAGAAATTGAAGGAGAACCCGTTCGATCGCAGAATTATT
ATGTCTGCGTGGAATCCTAAGGATATGAGGATTATGGCCCTGCCGCCGTG
TCATATGTTTGCGCAGTTTTATGTCCGCTTTCCCGATGCGAAGAGGGATG
AGGAGGGTGTTGTGAGGGATGGGGAGTGGGGAAGGGGCCATTTGGATTGT
TTGTTGTATCAGAGGAGTGCGGATATGGGCCTCGGGGTGCCGTTTAATAT
TGCTTCTTATGCGTTGTTGACGCATTTGTTGGCCCATGCCGTGGATATGG
TTCCCGGGACATTGGTGCATACGTTGGGCGATGCGCATGTTTATTTGGAT
CATGTCGATGCGTTGAAGGAGCAGATTGAGCGCGAGCCGGTGGCGTTTCC
GGAGGTGAGGATCAAGAGGGAAGATCGGGGTAGTGGGGTCGTTGATGGTT
GGAAAGAGGAGGAGTTTGAGGTGATTGGGTATAAGCCGCATAAGGCGATT
AAGATGAAGATGAGCGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004799 | thymidylate synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006231 | dTMP biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263RVR |
| DBxref | InterPro:IPR020940 |
| DBxref | InterPro:IPR036926 |
| DBxref | InterPro:IPR023451 |
| DBxref | InterPro:IPR000398 |
| DBxref | PFAM:PF00303 |
| Product | Thymidylate synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2031627..2032697 - |
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