You are here

Home

KJC3_000820-T1, KJC3_000820-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000820-T1
Unique NameKJC3_000820-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2039231..2039828-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000820-T1 ID=KJC3_000820-T1|Name=KJC3_000820-T1|organism=Aspergillus niger KJC3|type=mRNA|length=598bp|location=Sequence derived from alignment at ch1:2039231..2039828- (Aspergillus niger KJC3)
ATGGCCACCAAGACTTCGCAGGCCGCAAAGGAAAGCAGGCATTGGCAGGA
CAGACTTGAAAGTATGCCCCACTCCGCTGCAATAATCTTCCTCTCTGCAC
TTTCGACTTAGCCGTGACGGCGGCCCCCTTCTTCTGTCAGATAACTAACC
CTGACTTCTCACAAAGTATACTGCTTCGAGAACAAGTTGAAGGAGCCGGT
TTACCTTTACGATTCGGATCGTCGAGGTGAGAAGCCCTTTTCTTCGTATC
TCCCAGCCTTCGACTCTCCTGGTTACCCCTCGTTGCTGGAGTTCCATGTC
CCTTCCTTGCCCCTCATTGCTTGCTGTTGTCCACTGTGTGCTTGTGATGG
TGCAGATAAGCTGTGCTTCACCGACTTTTGAGCCTTCCCAAGTCAAACAA
AAGATCTGGTTATACTGACGGGTGTGTCGCTGTTCAGGAGGTCGCACAGC
TTGGACCTCCAAGGTCACCGTACAGCACCATGTCCCGAATATTCCGTGGA
TAATTCCGGGACGATACTTCTTCGACGGTCATAACAATGCCCGAGAAGAT
GCTGCTGAGGTCGCTTATAGGGCGTTGACCAAGACCACCAACCCCTGA
back to top

Coding sequence (CDS) from alignment at ch1:2039231..2039828-

>KJC3_000820-T1 ID=KJC3_000820-T1|Name=KJC3_000820-T1|organism=Aspergillus niger KJC3|type=CDS|length=846bp|location=Sequence derived from alignment at ch1:2039231..2039828- (Aspergillus niger KJC3)
GAGGTCGCACAGCTTGGACCTCCAAGGTCACCGTACAGCACCATGTCCCG
AATATTCCGTGGATAATTCCGGGACGATACTTCTTCGACGGTCATAACAA
TGCCCGAGAAGATGCTGCTGAGGTCGCTTATAGGGCGTTGACCAAGACCA
CCAACCCCTGATATACTGCTTCGAGAACAAGTTGAAGGAGCCGGTTTACC
TTTACGATTCGGATCGTCGAGATGGCCACCAAGACTTCGCAGGCCGCAAA
GGAAAGCAGGCATTGGCAGGACAGACTTGAAAGAGGTCGCACAGCTTGGA
CCTCCAAGGTCACCGTACAGCACCATGTCCCGAATATTCCGTGGATAATT
CCGGGACGATACTTCTTCGACGGTCATAACAATGCCCGAGAAGATGCTGC
TGAGGTCGCTTATAGGGCGTTGACCAAGACCACCAACCCCTGATATACTG
CTTCGAGAACAAGTTGAAGGAGCCGGTTTACCTTTACGATTCGGATCGTC
GAGATGGCCACCAAGACTTCGCAGGCCGCAAAGGAAAGCAGGCATTGGCA
GGACAGACTTGAAAGAGGTCGCACAGCTTGGACCTCCAAGGTCACCGTAC
AGCACCATGTCCCGAATATTCCGTGGATAATTCCGGGACGATACTTCTTC
GACGGTCATAACAATGCCCGAGAAGATGCTGCTGAGGTCGCTTATAGGGC
GTTGACCAAGACCACCAACCCCTGATATACTGCTTCGAGAACAAGTTGAA
GGAGCCGGTTTACCTTTACGATTCGGATCGTCGAGATGGCCACCAAGACT
TCGCAGGCCGCAAAGGAAAGCAGGCATTGGCAGGACAGACTTGAAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000820KJC3_000820Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000820-T1KJC3_000820-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000820-T1.cdsKJC3_000820-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000820-T1.exon3KJC3_000820-T1.exon3Aspergillus niger KJC3exon
KJC3_000820-T1.exon2KJC3_000820-T1.exon2Aspergillus niger KJC3exon
KJC3_000820-T1.exon1KJC3_000820-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2039231..2039828 -
Powered by Drupal