|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2053345..2055605+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000826-T1 ID=KJC3_000826-T1|Name=KJC3_000826-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2261bp|location=Sequence derived from alignment at ch1:2053345..2055605+ (Aspergillus niger KJC3)
CAGAAAGACGGTCACTCCGCCGGGGCGATCACTTCCACTGGCTTCAATCT
TCGAGTCATTCCTGCGGTCTGTTTTCTCCTTGTTACCACTCCCTTTGCCC
TTCAGATCAGATCCTGAACGGAGAAAGCTCACCCTTCATACTACATAATA
TTCTACATAACTTGCTTGGACTGAATTGGCGATATTCCGTCGGTCGCTCC
TATCTATCGCCTACGTCACCAGCGGTGCCCCTCCAAGGAAGACCCCACCA
TCAGACCTTGGATCCGATATTAGTCGGTGTGTGGTCTCGAAAGAGGTTGC
AACAACTTCTCCGAGCTCCAAGATACCGTTGATCGCGAGACGACCGAAAA
GGCAGCCTAATTGGGGCGAACTACCTCTCAGATATCTTTTCTAAAGAATT
CTGGCTGGATACTCAATTGAAAACTCAATTTCTCATCGAGTGGTATGGTA
CATACGGCTACCATGGAATCTACCGACCCCTACGCAAAGGAGCTTCAGAT
TGCCTGTCTCACAGTTCAGAGAGCCACGCTCTTGACGAAAAAGCTATTGG
AAGCTGTGGACAAGGGGTCTTTCGACAAGAATGACGCCACCCCAGTGACA
ATTGCTGATTTTGCTGCACAGGCACTGATTATCGCTGCCATTCACCATGC
TTTCCCCGACGATGAGTTTGTCGGAGAGGAGAGCTCAGATGCTCTTCGAT
CCGATCCTGCTCTCCTTGACAGGACATGGGAGCTGGTCTCCTCTACCCGC
CTGTCGGACGAGGAAAGCGATGCGCTGCTCTACGCTCCGAGCAGTAAGGA
GGAAATGCTTGATTTGATTGACCTCGGTGCTCAGGGCAACTGTAGCAAGC
AGAGCCGTGCTTGGGTTTTGGACCCCGTTGACGGCACCGCAACCTTTATT
CAAGGTCAGCAGTACGCCGTTTGTTTGTCACTGGTGGAAAACGGCTACCA
GAAGGTTGGCGTCTTAGGCTGTCCGAATATGAATCTGGAGACGGGTCGCC
TTCATGAAAACATCGTCGACCGAGATGGCTACGGGCACCAGGTATTCGCC
GTTGCCGGACAAGGCGCATTTATTCGGCGAATGGGAACGGGAGCTCTCCT
CCCCTCGCGCAAGATCGAGCCAAAGGCGCAGATTACGGACCCGAAAGATA
TCGATTTTGTCGATTGCGTGTCAGCGACATCATCCGACAGGAACATGCAT
GCCCGCCTTGCGTCGCATTTGGGTGCACCTTGGCCGGCCTCGACGGACCT
CTGGGCCGCGCAGCTGCGATACATCGCCATCGCAGTGGGAGGTTGTAATG
TGATGATCAAAATTCCGCATAAATCTTCCTATCGGTCGAAGATTTGGGAT
CATTCAGGTGGCATGTTGATCGCCGAAGAACTCGGATGTACTGTTAGTGA
TCTGGCGGGTAATCCAGTCGACTGCAGCTTGGGCAGGACCCTGTCTGGTT
GCTACGGGATGATCGTTGCACCTTCGTCCATCCACAGCCGGCTCGTGGAG
GCAGTGAAACAGATCATGTAAGACTAACGGTTAATCCGGGGTCTGGGTTG
GCGGATGGGCTGCCTTGACAGTCCCCGCTTACGGCTTTTGCTTTTTCTTC
GGGGCTACTAGTTTTATTATTATCTCACAACCTAGTGTTTGATGAAAGAG
CAAGGCTACGGACTAGTATGCCGTGACTATGCAGCCCCCCAAGTGGTTTG
ACAGGACAGTTCGTGCGTGAGGGCCAGGAGTACTTGTTGGGCTACCACAA
GACGAACAAGACACCCGGCGGTATTCGCGCGCAGATGCATTCGAAAAGGG
TACTCTTGCTGCATTTTGTCTGCTCACTGGCGGAAGAGACTCTCGGCTGC
ATGCGCCAACAGGACCGTGCACTGATCGACAACGTGGGGACGGCGATCAA
CGGCATATGACGACCATTGACGACGAGATGGCGATGATGGAGGGAGGACA
GGAGCATGCAGTACCTCTATAATGCGTTCTGTTTGCATATTTACCACTGT
TAGCGTTTTATCGCGTCCTCTGATGTTGGATAGAGATCGATACCTTTAAG
GATGATGTCATAGATACTAGTCGTCACCTCATTGTGCTGAACCAGGGAAA
AGGCCCCCACATACCGTAGTACACCAGCTCCAAGCAACGAGCTAAGCAGG
AAAGAACATCTAAGAGACGAGTAATACTACGCAACACGACATCCGGAAGC
ACGGCAGTCCCGTGATGGCTGGGCGGGCTGGCCAGTGAGAGACGCGAGAG
CCTGTCAGGAG back to topCoding sequence (CDS) from alignment at ch1:2053345..2055605+ >KJC3_000826-T1 ID=KJC3_000826-T1|Name=KJC3_000826-T1|organism=Aspergillus niger KJC3|type=CDS|length=1077bp|location=Sequence derived from alignment at ch1:2053345..2055605+ (Aspergillus niger KJC3)
ATGGTACATACGGCTACCATGGAATCTACCGACCCCTACGCAAAGGAGCT
TCAGATTGCCTGTCTCACAGTTCAGAGAGCCACGCTCTTGACGAAAAAGC
TATTGGAAGCTGTGGACAAGGGGTCTTTCGACAAGAATGACGCCACCCCA
GTGACAATTGCTGATTTTGCTGCACAGGCACTGATTATCGCTGCCATTCA
CCATGCTTTCCCCGACGATGAGTTTGTCGGAGAGGAGAGCTCAGATGCTC
TTCGATCCGATCCTGCTCTCCTTGACAGGACATGGGAGCTGGTCTCCTCT
ACCCGCCTGTCGGACGAGGAAAGCGATGCGCTGCTCTACGCTCCGAGCAG
TAAGGAGGAAATGCTTGATTTGATTGACCTCGGTGCTCAGGGCAACTGTA
GCAAGCAGAGCCGTGCTTGGGTTTTGGACCCCGTTGACGGCACCGCAACC
TTTATTCAAGGTCAGCAGTACGCCGTTTGTTTGTCACTGGTGGAAAACGG
CTACCAGAAGGTTGGCGTCTTAGGCTGTCCGAATATGAATCTGGAGACGG
GTCGCCTTCATGAAAACATCGTCGACCGAGATGGCTACGGGCACCAGGTA
TTCGCCGTTGCCGGACAAGGCGCATTTATTCGGCGAATGGGAACGGGAGC
TCTCCTCCCCTCGCGCAAGATCGAGCCAAAGGCGCAGATTACGGACCCGA
AAGATATCGATTTTGTCGATTGCGTGTCAGCGACATCATCCGACAGGAAC
ATGCATGCCCGCCTTGCGTCGCATTTGGGTGCACCTTGGCCGGCCTCGAC
GGACCTCTGGGCCGCGCAGCTGCGATACATCGCCATCGCAGTGGGAGGTT
GTAATGTGATGATCAAAATTCCGCATAAATCTTCCTATCGGTCGAAGATT
TGGGATCATTCAGGTGGCATGTTGATCGCCGAAGAACTCGGATGTACTGT
TAGTGATCTGGCGGGTAATCCAGTCGACTGCAGCTTGGGCAGGACCCTGT
CTGGTTGCTACGGGATGATCGTTGCACCTTCGTCCATCCACAGCCGGCTC
GTGGAGGCAGTGAAACAGATCATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046855 | inositol phosphate dephosphorylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000826-T1.utr5p1 | KJC3_000826-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000826-T1.utr3p1 | KJC3_000826-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000760 |
| DBxref | PFAM:PF00459 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2053345..2055605 + |
|
