You are here

Home

KJC3_000827-T1, KJC3_000827-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000827-T1
Unique NameKJC3_000827-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2055666..2057432+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000827-T1 ID=KJC3_000827-T1|Name=KJC3_000827-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1767bp|location=Sequence derived from alignment at ch1:2055666..2057432+ (Aspergillus niger KJC3)
CTAAAGTACTTTTCCTACTTATGCTTCGTCGCTGAAAATCCTTCACCTCT
GCTGTGCTACGCAATATAACCGGATGTCCTTCCCTTCTTTCCCAGTCGGG
CTCAGAGTTCGCTCTTCCTGATTCTAGGTCTCCTTCGCCCGTTCACCCTA
TCCATCCCTACCTCTTAATCCATAGCAGTCGCTATGTCGACCTGTGAGTT
CCTCCCCCTTGTTTCCTAAGACACTCTCACCTGCGATACGCCGTTTATTC
ATCAGTTACTGATTGTGATGTTTCCCAGACAATCCATTCTCTAGGCGAGA
GTCGCACGGCAGGTTCTCACTTGGAACCTATCGCGTCCTCGTTCCCTTGT
CGTGGCTGCTCGTGGTGGTCGTCGGCATCTACTACTCCTCCCATGCCCCC
GATGTCAAGCATGGCCATACCATCTGGAAGCAAGCCAACAAGCATATTAC
TCCATTTAGCTTGAGCACGGTTATTGCTGGTATCTATTGGTAAATCCACC
CAGGTTTCCTTCTATGACATCTTTAATATATTGAGCTACCAACCTTGCTC
TATGATTACCAACCTATTCTTACGACCTGCTACTTTAGGATCATAACCCT
CCTGTCTCAAATCGGCTTTGTCTACCACCTTTTCTCCAATGATGCGGTAA
CGGCCACCGCCGCCGCCAATGTAGGGTCACATTTTATCCTGAACAATTTG
TTCATTTTCGCCTGGATCCTTCTGTGGACTCGTAACCACTTCTGGGGCTC
AGAAATTATCCTGATCGCGCACTTCCTGAATCAAAAGACGACCTACTGGC
GGCATCGCACACTACCACCTCTTGCGCATTTTGCCGCTGTCGCAGCGCCC
TACGCCTGGACTCTGATCACTCTCTTCTGGAACGGAGCAGTTGCTGTGAA
CAGCAACAGCCTGCCAGCGAGGATCGTCGCTAATGTGTTCATTTGGGTAT
TGTTCGCGCTGGGGTCGACGCATATCTTGTCCACCCAGGATGACATTCTG
GGTTACAGTCTGAGTCTCTTGACGCTGGGTATGTATCAGTACAAAATTAT
CTGAAAAAGTAGCGTCACAGCGCTAACACCTCTGCAGCATTGGCCGTCAA
GCAGTTCGGCGTCAAGGTCATCTCCCTACAGTGGATATTTGCCATTGTCA
TCTTTGCTGTCTTCTTCGCCGAGTCCCTCTATATTTCCCTGACGAAGTAC
TCTGGGCGCAACATCTTTTTCCGCAGGGCCGGGCAGCCGGCGCCGGCAAC
CGATCGCGAGAGGGAGCCGTTGCTCAACGATTCGACCCAGCCAGCACAAA
CGGCCTAATTAAGGGCTATGAATCAATCGCCATCTTACGCGCTTGTCAGG
AAGCAGGTGGCTTTGTGAACATGAATCCCAAAAAGTGAGTCCATTGCGCT
TAATGTCTGAGCCTCTTTTCGGGTCTAAGTTGGGTTGTTCATTTATTGTC
TTGTTGTGCTCGGGTAGTACTACAATTCCTTGACTGCTACAGGACTGGGG
GGATTATGATATATTAACGACACGTCAGTTTATGGGCTATACAGTTGTGG
GTGTAATATGGCGAAGATGGATTTTGTCAACTTGATGGATATGTTGTTAG
TGTGCTTGGGAACCTAATTTGTCTCTACTCTAATTATCAGCCTTCTATAT
TTACTGTTTTGGTCAAGCTATTGGTGAGCCACAGCTAATCGTCTACGGGC
ACGCGGAACTGGAATGGACTGGTGTTTACGACCGAGTTCTCCACAACATA
TGAGGTTATATATTGCT
back to top

Coding sequence (CDS) from alignment at ch1:2055666..2057432+

>KJC3_000827-T1 ID=KJC3_000827-T1|Name=KJC3_000827-T1|organism=Aspergillus niger KJC3|type=CDS|length=3528bp|location=Sequence derived from alignment at ch1:2055666..2057432+ (Aspergillus niger KJC3)
ATGTCGACCTACAATCCATTCTCTAGGCGAGAGTCGCACGGCAGGTTCTC
ACTTGGAACCTATCGCGTCCTCGTTCCCTTGTCGTGGCTGCTCGTGGTGG
TCGTCGGCATCTACTACTCCTCCCATGCCCCCGATGTCAAGCATGGCCAT
ACCATCTGGAAGCAAGCCAACAAGCATATTACTCCATTTAGCTTGAGCAC
GGTTATTGCTGGTATCTATTGGATCATAACCCTCCTGTCTCAAATCGGCT
TTGTCTACCACCTTTTCTCCAATGATGCGGTAACGGCCACCGCCGCCGCC
AATGTAGGGTCACATTTTATCCTGAACAATTTGTTCATTTTCGCCTGGAT
CCTTCTGTGGACTCGTAACCACTTCTGGGGCTCAGAAATTATCCTGATCG
CGCACTTCCTGAATCAAAAGACGACCTACTGGCGGCATCGCACACTACCA
CCTCTTGCGCATTTTGCCGCTGTCGCAGCGCCCTACGCCTGGACTCTGAT
CACTCTCTTCTGGAACGGAGCAGTTGCTGTGAACAGCAACAGCCTGCCAG
CGAGGATCGTCGCTAATGTGTTCATTTGGGTATTGTTCGCGCTGGGGTCG
ACGCATATCTTGTCCACCCAGGATGACATTCTGGGTTACAGTCTGAGTCT
CTTGACGCTGGCATTGGCCGTCAAGCAGTTCGGCGTCAAGGTCATCTCCC
TACAGTGGATATTTGCCATTGTCATCTTTGCTGTCTTCTTCGCCGAGTCC
CTCTATATTTCCCTGACGAAGTACTCTGGGCGCAACATCTTTTTCCGCAG
GGCCGGGCAGCCGGCGCCGGCAACCGATCGCGAGAGGGAGCCGTTGCTCA
ACGATTCGACCCAGCCAGCACAAACGGCCTAAATGTCGACCTACAATCCA
TTCTCTAGGCGAGAGTCGCACGGCAGGTTCTCACTTGGAACCTATCGCGT
CCTCGTTCCCTTGTCGTGGCTGCTCGTGGTGGTCGTCGGCATCTACTACT
CCTCCCATGCCCCCGATGTCAAGCATGGCCATACCATCTGGAAGCAAGCC
AACAAGCATATTACTCCATTTAGCTTGAGCACGGTTATTGCTGGTATCTA
TTGGATCATAACCCTCCTGTCTCAAATCGGCTTTGTCTACCACCTTTTCT
CCAATGATGCGGTAACGGCCACCGCCGCCGCCAATGTAGGGTCACATTTT
ATCCTGAACAATTTGTTCATTTTCGCCTGGATCCTTCTGTGGACTCGTAA
CCACTTCTGGGGCTCAGAAATTATCCTGATCGCGCACTTCCTGAATCAAA
AGACGACCTACTGGCGGCATCGCACACTACCACCTCTTGCGCATTTTGCC
GCTGTCGCAGCGCCCTACGCCTGGACTCTGATCACTCTCTTCTGGAACGG
AGCAGTTGCTGTGAACAGCAACAGCCTGCCAGCGAGGATCGTCGCTAATG
TGTTCATTTGGGTATTGTTCGCGCTGGGGTCGACGCATATCTTGTCCACC
CAGGATGACATTCTGGGTTACAGTCTGAGTCTCTTGACGCTGGCATTGGC
CGTCAAGCAGTTCGGCGTCAAGGTCATCTCCCTACAGTGGATATTTGCCA
TTGTCATCTTTGCTGTCTTCTTCGCCGAGTCCCTCTATATTTCCCTGACG
AAGTACTCTGGGCGCAACATCTTTTTCCGCAGGGCCGGGCAGCCGGCGCC
GGCAACCGATCGCGAGAGGGAGCCGTTGCTCAACGATTCGACCCAGCCAG
CACAAACGGCCTAAATGTCGACCTACAATCCATTCTCTAGGCGAGAGTCG
CACGGCAGGTTCTCACTTGGAACCTATCGCGTCCTCGTTCCCTTGTCGTG
GCTGCTCGTGGTGGTCGTCGGCATCTACTACTCCTCCCATGCCCCCGATG
TCAAGCATGGCCATACCATCTGGAAGCAAGCCAACAAGCATATTACTCCA
TTTAGCTTGAGCACGGTTATTGCTGGTATCTATTGGATCATAACCCTCCT
GTCTCAAATCGGCTTTGTCTACCACCTTTTCTCCAATGATGCGGTAACGG
CCACCGCCGCCGCCAATGTAGGGTCACATTTTATCCTGAACAATTTGTTC
ATTTTCGCCTGGATCCTTCTGTGGACTCGTAACCACTTCTGGGGCTCAGA
AATTATCCTGATCGCGCACTTCCTGAATCAAAAGACGACCTACTGGCGGC
ATCGCACACTACCACCTCTTGCGCATTTTGCCGCTGTCGCAGCGCCCTAC
GCCTGGACTCTGATCACTCTCTTCTGGAACGGAGCAGTTGCTGTGAACAG
CAACAGCCTGCCAGCGAGGATCGTCGCTAATGTGTTCATTTGGGTATTGT
TCGCGCTGGGGTCGACGCATATCTTGTCCACCCAGGATGACATTCTGGGT
TACAGTCTGAGTCTCTTGACGCTGGCATTGGCCGTCAAGCAGTTCGGCGT
CAAGGTCATCTCCCTACAGTGGATATTTGCCATTGTCATCTTTGCTGTCT
TCTTCGCCGAGTCCCTCTATATTTCCCTGACGAAGTACTCTGGGCGCAAC
ATCTTTTTCCGCAGGGCCGGGCAGCCGGCGCCGGCAACCGATCGCGAGAG
GGAGCCGTTGCTCAACGATTCGACCCAGCCAGCACAAACGGCCTAAATGT
CGACCTACAATCCATTCTCTAGGCGAGAGTCGCACGGCAGGTTCTCACTT
GGAACCTATCGCGTCCTCGTTCCCTTGTCGTGGCTGCTCGTGGTGGTCGT
CGGCATCTACTACTCCTCCCATGCCCCCGATGTCAAGCATGGCCATACCA
TCTGGAAGCAAGCCAACAAGCATATTACTCCATTTAGCTTGAGCACGGTT
ATTGCTGGTATCTATTGGATCATAACCCTCCTGTCTCAAATCGGCTTTGT
CTACCACCTTTTCTCCAATGATGCGGTAACGGCCACCGCCGCCGCCAATG
TAGGGTCACATTTTATCCTGAACAATTTGTTCATTTTCGCCTGGATCCTT
CTGTGGACTCGTAACCACTTCTGGGGCTCAGAAATTATCCTGATCGCGCA
CTTCCTGAATCAAAAGACGACCTACTGGCGGCATCGCACACTACCACCTC
TTGCGCATTTTGCCGCTGTCGCAGCGCCCTACGCCTGGACTCTGATCACT
CTCTTCTGGAACGGAGCAGTTGCTGTGAACAGCAACAGCCTGCCAGCGAG
GATCGTCGCTAATGTGTTCATTTGGGTATTGTTCGCGCTGGGGTCGACGC
ATATCTTGTCCACCCAGGATGACATTCTGGGTTACAGTCTGAGTCTCTTG
ACGCTGGCATTGGCCGTCAAGCAGTTCGGCGTCAAGGTCATCTCCCTACA
GTGGATATTTGCCATTGTCATCTTTGCTGTCTTCTTCGCCGAGTCCCTCT
ATATTTCCCTGACGAAGTACTCTGGGCGCAACATCTTTTTCCGCAGGGCC
GGGCAGCCGGCGCCGGCAACCGATCGCGAGAGGGAGCCGTTGCTCAACGA
TTCGACCCAGCCAGCACAAACGGCCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000827KJC3_000827Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000827-T1KJC3_000827-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000827-T1.utr5p1KJC3_000827-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000827-T1.exon1KJC3_000827-T1.exon1Aspergillus niger KJC3exon
KJC3_000827-T1.exon2KJC3_000827-T1.exon2Aspergillus niger KJC3exon
KJC3_000827-T1.exon3KJC3_000827-T1.exon3Aspergillus niger KJC3exon
KJC3_000827-T1.exon4KJC3_000827-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000827-T1.cdsKJC3_000827-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000827-T1.utr3p1KJC3_000827-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013920
DBxrefPFAM:PF08611
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2055666..2057432 +
Powered by Drupal