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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2100977..2102346- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000842-T1 ID=KJC3_000842-T1|Name=KJC3_000842-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1370bp|location=Sequence derived from alignment at ch1:2100977..2102346- (Aspergillus niger KJC3)
ATGTTCTGGGGAAAGCATCACGACGACACGCCCGAAGCGGCCCAACAACC
ACCCATTCCTCGCAAGAAGCTCCCTTCGCATTTACAAACCTTGGCCGACC
ACGACGACGGCTTCTACGATGACATCTATTCCTCGTAGTATGTCTGATAC
CTTTTCTTTTCATATCTCACTGTCATGTTTTATCCCCAACATTGTCGGTG
TCGCAAGGGAGGACAAGAGAAAAAGCGAAGACGCTCTCTCTCTCTCTCTC
TTTCTTTCTCCGCGTGTCTCCCCGCATTTCCGATCCCCGCAAGAAACCAA
AAAAGCAACGCAACGCAAAACGGAGAATCACCCACACCACCAGCTGCTAG
TTAGCTACTCATAGCATACTAACTAAATCTCTCTCTCTCTCTTCCTATCA
CAGCTCCGTAGACTCCACCGAAACTCCCTACCGCTACGCCGGTTACGCCA
ACCGTCTCCGCACTGTTCTTCTCTCCGCCCACCGCTATGTCGCCTACACC
TCCGACATAGGCGAATCCTTTCGCCCCGTCGCCCACCCCTGGCTCGTGCG
ATCCGCCTATGCCATCTCCTGGACCTATCTAATTGGCGATGTCGCCCACG
AAGGCTACAAAGCCTACCTCCGCAATCGCCGCGTCCTGGCTCCTCCCTGT
GAGGCCTACAAGGACGCCAGCGATCTCACCCACGACAAAATCGCCAAGGG
CATGGTGACCGGCAACATCGCCGGCTCCCTAACAGGCGGCGATACGCTGA
TGCCATGGCCCACGACTCACGTGCCTCTGGCTGAGGACTACCGCACGGTG
ATGGCCCAGCGCGCCGTGTTCCAGGGTATCGCCAGTATGGGTCTGCCGGC
CTTTACTATCCACTCTGTGGTCAAGTACTCCGGGCGCATGTTGAAGAACT
CCCGGAGTGTCTTTTTCCGCACTTGGGCGCCTATCGGGGTGAGTTTCTCC
GCATTTGTCATGTGAAATCGGTATGGGGAATGGTCCGCTAACTATGCAAT
AAACTAGCTCGGTCTCTCCGTCGTGCCTTTCCTCCCGTACCTATTCGACA
AGCCCGTCGAAGAGGCTGTCGAATGGGCTTTCCATACCGGACTCCGTGCC
TATGCCGGTGAAGATGCCGTGCGTCCGCTACCTCAGGCCGTGAGAACTCC
TCACGATGAGGACACCTCCCTCAGCCACTTCCTTAAGCTCCAGGCCGAGA
AGAACAACGGCGAAGTCATGGGCCACGACGCTAACCTCTCCTGGGAGCAG
TACAAGGAGGACCGCCGTCGAGCTAAGGAGCAGCGGATGCAGGAGCGTGA
GCAGCGCGGCGAGGCCGGCCCGCTGGCCTTACTGGGTTTCGGGTCTAACT
CGAAAGAAAAGAAAGAGTGA back to topCoding sequence (CDS) from alignment at ch1:2100977..2102346- >KJC3_000842-T1 ID=KJC3_000842-T1|Name=KJC3_000842-T1|organism=Aspergillus niger KJC3|type=CDS|length=3105bp|location=Sequence derived from alignment at ch1:2100977..2102346- (Aspergillus niger KJC3)
CTCGGTCTCTCCGTCGTGCCTTTCCTCCCGTACCTATTCGACAAGCCCGT
CGAAGAGGCTGTCGAATGGGCTTTCCATACCGGACTCCGTGCCTATGCCG
GTGAAGATGCCGTGCGTCCGCTACCTCAGGCCGTGAGAACTCCTCACGAT
GAGGACACCTCCCTCAGCCACTTCCTTAAGCTCCAGGCCGAGAAGAACAA
CGGCGAAGTCATGGGCCACGACGCTAACCTCTCCTGGGAGCAGTACAAGG
AGGACCGCCGTCGAGCTAAGGAGCAGCGGATGCAGGAGCGTGAGCAGCGC
GGCGAGGCCGGCCCGCTGGCCTTACTGGGTTTCGGGTCTAACTCGAAAGA
AAAGAAAGAGTGACTCCGTAGACTCCACCGAAACTCCCTACCGCTACGCC
GGTTACGCCAACCGTCTCCGCACTGTTCTTCTCTCCGCCCACCGCTATGT
CGCCTACACCTCCGACATAGGCGAATCCTTTCGCCCCGTCGCCCACCCCT
GGCTCGTGCGATCCGCCTATGCCATCTCCTGGACCTATCTAATTGGCGAT
GTCGCCCACGAAGGCTACAAAGCCTACCTCCGCAATCGCCGCGTCCTGGC
TCCTCCCTGTGAGGCCTACAAGGACGCCAGCGATCTCACCCACGACAAAA
TCGCCAAGGGCATGGTGACCGGCAACATCGCCGGCTCCCTAACAGGCGGC
GATACGCTGATGCCATGGCCCACGACTCACGTGCCTCTGGCTGAGGACTA
CCGCACGGTGATGGCCCAGCGCGCCGTGTTCCAGGGTATCGCCAGTATGG
GTCTGCCGGCCTTTACTATCCACTCTGTGGTCAAGTACTCCGGGCGCATG
TTGAAGAACTCCCGGAGTGTCTTTTTCCGCACTTGGGCGCCTATCGGGAT
GTTCTGGGGAAAGCATCACGACGACACGCCCGAAGCGGCCCAACAACCAC
CCATTCCTCGCAAGAAGCTCCCTTCGCATTTACAAACCTTGGCCGACCAC
GACGACGGCTTCTACGATGACATCTATTCCTCGTACTCGGTCTCTCCGTC
GTGCCTTTCCTCCCGTACCTATTCGACAAGCCCGTCGAAGAGGCTGTCGA
ATGGGCTTTCCATACCGGACTCCGTGCCTATGCCGGTGAAGATGCCGTGC
GTCCGCTACCTCAGGCCGTGAGAACTCCTCACGATGAGGACACCTCCCTC
AGCCACTTCCTTAAGCTCCAGGCCGAGAAGAACAACGGCGAAGTCATGGG
CCACGACGCTAACCTCTCCTGGGAGCAGTACAAGGAGGACCGCCGTCGAG
CTAAGGAGCAGCGGATGCAGGAGCGTGAGCAGCGCGGCGAGGCCGGCCCG
CTGGCCTTACTGGGTTTCGGGTCTAACTCGAAAGAAAAGAAAGAGTGACT
CCGTAGACTCCACCGAAACTCCCTACCGCTACGCCGGTTACGCCAACCGT
CTCCGCACTGTTCTTCTCTCCGCCCACCGCTATGTCGCCTACACCTCCGA
CATAGGCGAATCCTTTCGCCCCGTCGCCCACCCCTGGCTCGTGCGATCCG
CCTATGCCATCTCCTGGACCTATCTAATTGGCGATGTCGCCCACGAAGGC
TACAAAGCCTACCTCCGCAATCGCCGCGTCCTGGCTCCTCCCTGTGAGGC
CTACAAGGACGCCAGCGATCTCACCCACGACAAAATCGCCAAGGGCATGG
TGACCGGCAACATCGCCGGCTCCCTAACAGGCGGCGATACGCTGATGCCA
TGGCCCACGACTCACGTGCCTCTGGCTGAGGACTACCGCACGGTGATGGC
CCAGCGCGCCGTGTTCCAGGGTATCGCCAGTATGGGTCTGCCGGCCTTTA
CTATCCACTCTGTGGTCAAGTACTCCGGGCGCATGTTGAAGAACTCCCGG
AGTGTCTTTTTCCGCACTTGGGCGCCTATCGGGATGTTCTGGGGAAAGCA
TCACGACGACACGCCCGAAGCGGCCCAACAACCACCCATTCCTCGCAAGA
AGCTCCCTTCGCATTTACAAACCTTGGCCGACCACGACGACGGCTTCTAC
GATGACATCTATTCCTCGTACTCGGTCTCTCCGTCGTGCCTTTCCTCCCG
TACCTATTCGACAAGCCCGTCGAAGAGGCTGTCGAATGGGCTTTCCATAC
CGGACTCCGTGCCTATGCCGGTGAAGATGCCGTGCGTCCGCTACCTCAGG
CCGTGAGAACTCCTCACGATGAGGACACCTCCCTCAGCCACTTCCTTAAG
CTCCAGGCCGAGAAGAACAACGGCGAAGTCATGGGCCACGACGCTAACCT
CTCCTGGGAGCAGTACAAGGAGGACCGCCGTCGAGCTAAGGAGCAGCGGA
TGCAGGAGCGTGAGCAGCGCGGCGAGGCCGGCCCGCTGGCCTTACTGGGT
TTCGGGTCTAACTCGAAAGAAAAGAAAGAGTGACTCCGTAGACTCCACCG
AAACTCCCTACCGCTACGCCGGTTACGCCAACCGTCTCCGCACTGTTCTT
CTCTCCGCCCACCGCTATGTCGCCTACACCTCCGACATAGGCGAATCCTT
TCGCCCCGTCGCCCACCCCTGGCTCGTGCGATCCGCCTATGCCATCTCCT
GGACCTATCTAATTGGCGATGTCGCCCACGAAGGCTACAAAGCCTACCTC
CGCAATCGCCGCGTCCTGGCTCCTCCCTGTGAGGCCTACAAGGACGCCAG
CGATCTCACCCACGACAAAATCGCCAAGGGCATGGTGACCGGCAACATCG
CCGGCTCCCTAACAGGCGGCGATACGCTGATGCCATGGCCCACGACTCAC
GTGCCTCTGGCTGAGGACTACCGCACGGTGATGGCCCAGCGCGCCGTGTT
CCAGGGTATCGCCAGTATGGGTCTGCCGGCCTTTACTATCCACTCTGTGG
TCAAGTACTCCGGGCGCATGTTGAAGAACTCCCGGAGTGTCTTTTTCCGC
ACTTGGGCGCCTATCGGGATGTTCTGGGGAAAGCATCACGACGACACGCC
CGAAGCGGCCCAACAACCACCCATTCCTCGCAAGAAGCTCCCTTCGCATT
TACAAACCTTGGCCGACCACGACGACGGCTTCTACGATGACATCTATTCC
TCGTA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019560 |
| DBxref | PFAM:PF10558 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2100977..2102346 - |
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