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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2104108..2105021+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000844-T1 ID=KJC3_000844-T1|Name=KJC3_000844-T1|organism=Aspergillus niger KJC3|type=mRNA|length=914bp|location=Sequence derived from alignment at ch1:2104108..2105021+ (Aspergillus niger KJC3)
CTACCAGTTCCTACAGCTTCCCATCCAATCACTCAGAACCTACCAGTCAC
ACAGCCAGTCAGTCACCTGACCATATCCAACCTTTCACGATAACATCCCA
AACCAACCCACAATCTGAACCTCTCCCAATCCACCCATTCAACCACACCA
CCACTCACCCTCGCACCAACCATGAAACCAACCCCCTTCCCTTTCGCCCT
CAACATCGGCACCGACATCGTCCACCTCCCCCGAATAACCCGCCTCCTCG
CCCGCCCCAACTACCTCACCCGCTTCACGCACCGCATTCTCCACGCCCGC
GAACAACAAGACTTTCGCACGCGGTTCGCCCTTCCTTCTCTCCCTCCCTT
ATCCTCCCAAACGCAAACTCCTAGCATAAGTATATCCCCCGACATGACGC
GGTGGCTCGCAGGCCGGTTCGCGGCCAAAGAGGCAGCACGGAAAGCGGCG
CCCCGCGGCGCGGCGCATATTAGCTGGAAGGATGTGGTGGTTACGGTGGG
GGAGGATGTGGGGAGGCCGGAGGTGGTATATTTAGATGGGGAGGGGGAGG
ATGAGGCAGGGAGGGTAGGGAAATTGTCGATTTCGCATGATGGGGAGTAT
GTGGTTGCTATGGTGGTGGCGGCGGGGTGAGGTATATTCTTCATTGAAGG
AGAGTATATGGGATTTCATATAAGGTTTACGTGCTGGGGAGGGGAGTATG
TGGCGGATGCTAGACTGGGAGTTGGTTTGAACAGTTCAGTGTGACGCTGA
GACAATTGAGGGATGGGCTATGGCTGTGTTGGGGTAATATTTGGATGAAG
GGAGGTGTGAAGATGCGCCTGCTTGAGAGAGGAGACATGTGGTAGAGCTA
GCTGGCTAGCTACGTATACAGATGGAGTGTATCAATAGATGTATAGTAGA
GTACAATAGTAATG back to topCoding sequence (CDS) from alignment at ch1:2104108..2105021+ >KJC3_000844-T1 ID=KJC3_000844-T1|Name=KJC3_000844-T1|organism=Aspergillus niger KJC3|type=CDS|length=459bp|location=Sequence derived from alignment at ch1:2104108..2105021+ (Aspergillus niger KJC3)
ATGAAACCAACCCCCTTCCCTTTCGCCCTCAACATCGGCACCGACATCGT
CCACCTCCCCCGAATAACCCGCCTCCTCGCCCGCCCCAACTACCTCACCC
GCTTCACGCACCGCATTCTCCACGCCCGCGAACAACAAGACTTTCGCACG
CGGTTCGCCCTTCCTTCTCTCCCTCCCTTATCCTCCCAAACGCAAACTCC
TAGCATAAGTATATCCCCCGACATGACGCGGTGGCTCGCAGGCCGGTTCG
CGGCCAAAGAGGCAGCACGGAAAGCGGCGCCCCGCGGCGCGGCGCATATT
AGCTGGAAGGATGTGGTGGTTACGGTGGGGGAGGATGTGGGGAGGCCGGA
GGTGGTATATTTAGATGGGGAGGGGGAGGATGAGGCAGGGAGGGTAGGGA
AATTGTCGATTTCGCATGATGGGGAGTATGTGGTTGCTATGGTGGTGGCG
GCGGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006633 | fatty acid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008897 | holo-[acyl-carrier-protein] synthase activity |
| GO:0000287 | magnesium ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000844-T1.utr5p1 | KJC3_000844-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000844-T1.utr3p1 | KJC3_000844-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002582 |
| DBxref | InterPro:IPR008278 |
| DBxref | InterPro:IPR037143 |
| DBxref | PFAM:PF01648 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2104108..2105021 + |
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