|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2105123..2106784+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000845-T1 ID=KJC3_000845-T1|Name=KJC3_000845-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1662bp|location=Sequence derived from alignment at ch1:2105123..2106784+ (Aspergillus niger KJC3)
GCAGAACATCCGCGCCAGACTGACTCGCCGCAACAACTCCCTGCTTCTTC
ACACGGCCCTCTTCACCACCCTCCTAGTAGTCCAGGGTCACGTCTCAGTG
AGTTTGTCAGTGGCTGACCAGTTATAATTAGCCTGGCCTTCACGAGCTCC
GGCGGGTTCTCCCTTATATACCAGCAGCAACAGCAACCCCTCCATCGCGG
GGTAACCGGCCGCAGTAAGTGATACAACATCGCGTATCATCACGACTTCA
GTCCACCACATCTACAAGTTGATCACCTACTAATACCTCTCCAGATGCCC
TTCACTCATCACAGCCACTCCGGGCAATTCTGCCCCGGCCACGCCAAAGA
CAACTTGGAAGAAATCATCCAGCTCGCCATATCCAAGAAATTCCACACCT
TCTGCCTAACAGAGCACATGCCCCGCCATGAAGAAGATTTCTACCCAGAA
GAGGTATGTAACCCATCTTATCTACGATACACCCTACCCGATAACCTAAC
TAAAACAACTAACCAACCCAGATCGAAGCCGGCGACACCGAATCCAGCCA
CGTAGCCAACGAGGCCGCCTACTTCGCCGAAGCCACGCGCCTCCGAACCA
AATACGCCGATCAAATCAACATCCTCATCGGATTCGAGATCGACTGGATC
CGGCCGGCCTCGCGACAGCTAATCGAGGAGTCTCTGTCGCGGCACCCGTT
CGAGTTCTTCATGGGTTCCGTGCACCATACATTGACCGTCCCCATAGACT
ATGACCGGCCGCTGTATGAGAAGGCGCGCGCACTAGCCGGTGGAACGGAC
GAGTTGCTCTTCGAGGCGTACTTTGATGAGCAGCTGGATATGCTGAAGCA
GGTGAAGCCGGTGGTGGTGGGGCATTTTGATCTGATTCGGCTGAAGAGCG
ATGACCCCGATCGGAGTTTTCAGGACTATCCGAGGGTGTGGGAGAAGATT
CTACGAAATTTGGACTACGTGGCGGGATATGGGGGTCTGTTGGAGGTTAA
TTCGGCGGCGTTGAGGAAGGGCATGAAGGAGCCGTATCCGAATGGGGAGA
TTTGTAAGGAATTCCTGGCTCGCGGAGGTCGGTTCTGTCTGTCGGATGAT
AGTCATGGATTGGCGCAGGTTGGGCTGAATTTCCATCGCGTGGTGCCGTT
CTTGGAGCAGGTGGGTGTGTCGAGGCTGCATTATTTGGCACTGGGGGAGG
GTGATGCGCCCGTTGATGCACGGTTTCCTCGGACGCAGATCAAGGAGGTG
ACATTGGAGGAGGTGAAGAATATGTCGTTTTGGAGGTAGAATGGAGCCAG
AGCCACGAAGCCATGAATGATTTGGGGGGAGTTGAGTTGACAGGATGCAT
CACATGCAGGGTGAAATGGGGTTGCATGCATTGACAGTTGGTTTAGTTAT
TTTTTTGCTTTTCCCTATCTCAGATATCACACGGGAAAAAGAACGTGGAA
TGACTGATGTTGATGGTGGTTTAGTACGTAGTAGTAGTTCTGCTGGCACT
GGGGTCGATGGGCGGCCAGCCAGCTACTAAAGTACACCAAGTAGAACCGG
ACAATCAATTATGTCGCAGTGAAAATAGATAAAATAATACAGGCGGCACA
GGCGGCAGCCAGTGTCATCTAGATTTTGGGAACAGCATTTTTAGCTGCAG
GCGGGCATGAGG back to topCoding sequence (CDS) from alignment at ch1:2105123..2106784+ >KJC3_000845-T1 ID=KJC3_000845-T1|Name=KJC3_000845-T1|organism=Aspergillus niger KJC3|type=CDS|length=1854bp|location=Sequence derived from alignment at ch1:2105123..2106784+ (Aspergillus niger KJC3)
ATGCCCTTCACTCATCACAGCCACTCCGGGCAATTCTGCCCCGGCCACGC
CAAAGACAACTTGGAAGAAATCATCCAGCTCGCCATATCCAAGAAATTCC
ACACCTTCTGCCTAACAGAGCACATGCCCCGCCATGAAGAAGATTTCTAC
CCAGAAGAGATCGAAGCCGGCGACACCGAATCCAGCCACGTAGCCAACGA
GGCCGCCTACTTCGCCGAAGCCACGCGCCTCCGAACCAAATACGCCGATC
AAATCAACATCCTCATCGGATTCGAGATCGACTGGATCCGGCCGGCCTCG
CGACAGCTAATCGAGGAGTCTCTGTCGCGGCACCCGTTCGAGTTCTTCAT
GGGTTCCGTGCACCATACATTGACCGTCCCCATAGACTATGACCGGCCGC
TGTATGAGAAGGCGCGCGCACTAGCCGGTGGAACGGACGAGTTGCTCTTC
GAGGCGTACTTTGATGAGCAGCTGGATATGCTGAAGCAGGTGAAGCCGGT
GGTGGTGGGGCATTTTGATCTGATTCGGCTGAAGAGCGATGACCCCGATC
GGAGTTTTCAGGACTATCCGAGGGTGTGGGAGAAGATTCTACGAAATTTG
GACTACGTGGCGGGATATGGGGGTCTGTTGGAGGTTAATTCGGCGGCGTT
GAGGAAGGGCATGAAGGAGCCGTATCCGAATGGGGAGATTTGTAAGGAAT
TCCTGGCTCGCGGAGGTCGGTTCTGTCTGTCGGATGATAGTCATGGATTG
GCGCAGGTTGGGCTGAATTTCCATCGCGTGGTGCCGTTCTTGGAGCAGGT
GGGTGTGTCGAGGCTGCATTATTTGGCACTGGGGGAGGGTGATGCGCCCG
TTGATGCACGGTTTCCTCGGACGCAGATCAAGGAGGTGACATTGGAGGAG
GTGAAGAATATGTCGTTTTGGAGGTAGATGCCCTTCACTCATCACAGCCA
CTCCGGGCAATTCTGCCCCGGCCACGCCAAAGACAACTTGGAAGAAATCA
TCCAGCTCGCCATATCCAAGAAATTCCACACCTTCTGCCTAACAGAGCAC
ATGCCCCGCCATGAAGAAGATTTCTACCCAGAAGAGATCGAAGCCGGCGA
CACCGAATCCAGCCACGTAGCCAACGAGGCCGCCTACTTCGCCGAAGCCA
CGCGCCTCCGAACCAAATACGCCGATCAAATCAACATCCTCATCGGATTC
GAGATCGACTGGATCCGGCCGGCCTCGCGACAGCTAATCGAGGAGTCTCT
GTCGCGGCACCCGTTCGAGTTCTTCATGGGTTCCGTGCACCATACATTGA
CCGTCCCCATAGACTATGACCGGCCGCTGTATGAGAAGGCGCGCGCACTA
GCCGGTGGAACGGACGAGTTGCTCTTCGAGGCGTACTTTGATGAGCAGCT
GGATATGCTGAAGCAGGTGAAGCCGGTGGTGGTGGGGCATTTTGATCTGA
TTCGGCTGAAGAGCGATGACCCCGATCGGAGTTTTCAGGACTATCCGAGG
GTGTGGGAGAAGATTCTACGAAATTTGGACTACGTGGCGGGATATGGGGG
TCTGTTGGAGGTTAATTCGGCGGCGTTGAGGAAGGGCATGAAGGAGCCGT
ATCCGAATGGGGAGATTTGTAAGGAATTCCTGGCTCGCGGAGGTCGGTTC
TGTCTGTCGGATGATAGTCATGGATTGGCGCAGGTTGGGCTGAATTTCCA
TCGCGTGGTGCCGTTCTTGGAGCAGGTGGGTGTGTCGAGGCTGCATTATT
TGGCACTGGGGGAGGGTGATGCGCCCGTTGATGCACGGTTTCCTCGGACG
CAGATCAAGGAGGTGACATTGGAGGAGGTGAAGAATATGTCGTTTTGGAG
GTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000105 | histidine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004401 | histidinol-phosphatase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000845-T1.utr5p1 | KJC3_000845-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000845-T1.utr3p1 | KJC3_000845-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263UCR |
| DBxref | InterPro:IPR016195 |
| DBxref | InterPro:IPR004013 |
| DBxref | InterPro:IPR010140 |
| DBxref | PFAM:PF02811 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2105123..2106784 + |
|
