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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2111076..2114198- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000848-T1 ID=KJC3_000848-T1|Name=KJC3_000848-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3123bp|location=Sequence derived from alignment at ch1:2111076..2114198- (Aspergillus niger KJC3)
GGCGTATCGGGACGCCACCGGCCGACGTCAAGAGAGCAAATTACGGGCCT
CAGCGATGGACTTCAGGGCACCGCTTCAGCTGGGAAGGCATCTTGCCGAT
CAAAAGCATTGCCCACCAAACTCATCATCTTCTTTTTCTTTTCAATCGCT
GCAGTTGCCCGCTGAATTATCCGCAAGCACCGAAAATCCCCGGTTGCTTT
CTTTCACCTTGTTCCGCCGAGCAGAGCATGAGACAGCCACCCCGCCCTGC
CGACGTCTGATCTGCCGACTTGAGTCGTCATCACAGGAGGCTAAACTCCA
TACTTCTTCCTCTTCCTTATCCCGCGTCTCCTCCCACACTTCCTCCCACC
CCAACCTTCCCCCCCTACCCGCCTCAGTTCGTGGTCATCCATCCCCTGGG
TTCAGAGTCGGACAATCCTGCGGCTGGACTTCTACCCCGGTTCATCTACT
CGAAACACTGGTGATATCGCCGCTCCCTAGATCCCGTGCTAGCTCCGAGC
TTCAGGACACGGATGCGATAACTACAGCGCCCGGATGACGAATGGTCTGT
CGTAGAGACCTCCGATGGCAATTTGTGCCTGGGCGATCTCACACACAACG
CTGAGCTTCTGCCGGTGACCTGAAGACTCCCGCCCCTCCTTAAATCTATC
TTATCGCCCCCCCTTAGTCGCCAGGGATGAGTTCCAACGGCGGCTTTGCC
GACCTCTTTAGCCTTGGGACCGCGAGCACGACAAATACCGGCCGAAGATC
CACCTCGACCATTCGATCGCGCAACCGCCGTCTGATATCATTCACAGAGG
ATGAAGTCGACGAGAATGGCAAACAAATGCAGTCCTCCGGGTTGTCGTCG
ATGTTATCCCCCGATAACTCCGCTGTTCGCTCCCGCGGTGCTACACCTTC
ACCTAACCCGTCCCGCGGAGTGTCCCCCATACCCATGAGACATCCCTCTC
GAGCAACCGAAGCTGCCAACCGTAGCAAAGGAAACAGCTCCTTAGGTGGG
TTCTGCCGTGAGGAGGAAAGTGGAATAATGTTTGCTGAGTCGTCGCGAGC
CGCTGTAGACTTTTTTGATGCTTCATGGACCTCGCTTCAGAGTCTAGCCT
CGTCAGTACTAGGAAGCGATATTGCACGGCCGGCAACTACCAACGGAAGT
GCTAGGGGGCATGTGAGGAAACCTTCCCGCCCAGATCCTTATATGAGACC
CCCTGCACGAACGTCGACACCAGCAACCTGGGGTCCCTCGGCCCCGTCTA
CACCGGAGATTGGAAGCGGAACCCAGGAAGAGAGACAGGCACTAGTACAG
GCAAAGAAAAGGGAGGCCCTGTTATTGGCAGACACGGGTCCGGCATGGAG
TACAACCCCGCGACACAAACGCCGGGATTCTAGCGATCGGACGGGTCTTT
CGAATATTGACCCTGACCTCGACGAGGACGCCTTAGCTTATATACATCAT
GTACAATCCACAGATACCATTACCGGTGTTACGATACGATATGGGTGCCA
GCCTGCGGTATTCCGAAAGGCCAACGGCTTCTGGCCCAGCGATAGCATTC
AGGGCCGAAAAACCGTCCTCCTGCCGGTTGATTCGTGCTCGATCAAAGGA
CGCCCAATCCGGCCTAAGATGGGAGAGGATCTGCTAGGAGATGATCATCA
GGAACGCGAGTCTTTGGAAGATATGAACGGCAGCTCGATAGCGCCTACTT
CAGCGCCTACGTCTGCCGAGGGAGCAACATCTGCATCTCCTGCAGCGGAG
ATCGAAGGTGACCGAATCTGGAAGCACGAGTCATGGGTGCATATCGAGGG
CTTTCCGGGGCCGGTTGAAATCGGCCGCGTCCCGCGGAGAGCGTTGGGTT
TCTTCCCACGAACGCGACGGAAATCCGTTTCTTATTCGGACTCGGTGTCG
TCTCCATTGTCAGGCCGGGGAGGCACAACCGCTCCTTCGTCGCCTTCGCC
AATCGAGTCGGCATCGGCGCAGCCAGTTATTCCTCCATGGGCTCGCCCGC
ATGCTGATTCGTCTGCATCACGTACCTCTTCTAAGGGCAGGCCGGGCATT
CGCCATCAACGCCAGCGCAGCAACATCCAATTGTCGGGACCTGGCGTTGG
CACTCTCGACCATGATTCAAATGCGCCAGGCCCCGCCATGGACGGACTTA
GCAAATTCTTTGCCCAGCATTTGCCAAATCTTGCGCCCGTGGCACGCCCA
CCGGATTTTGAAAGTTCGTCGGAAAGTGCGTCGACCGCGGCCGCGAACAC
CCCAACCAGTCTGGACAACCTTGGCGGAGCAGTAGAGTCCTGGGTCAGGA
AGATGACGACCCGAGCCAAGGCCAGCTTGAATGAACTGCAACAGACGCAA
GGCCCGGCAACCCATGACCCCGCACAGGCCATGGGGCGACGCGGCAACGG
CGATCTCATCGAGCTGAACGATGGGTTGGAGTCTCGCAGCTCGTCGAATG
CGATCTCCGAGCCTCGGTGGAGACCCGATTTGCTACGGTCGGGGTCAAGC
CTTCACGAAGGAACAGCGTTGCGGGGACGTTTCCTCAGCCCTTCACCTGG
GACGAGCCGGACTCGTTCTGGGGGGGACAGGGCGAAAGATGATTGATGGG
CAATTACGATCCGAGCGCGCTATCTACGTGCTCCGGAAGCTTGCTCCTTG
ATTTGTTGTTTCATAATACTTATTTGTGCTCTTTAGCCCGACTGCAGTGG
TGGCTGCATGTTGGGCAGGTATTTAACTTTGGGCGATACCAACTACGCAT
GCACTTTGAAGCATAGCACGGCGCGCCGGGGATGCGTGTCGTCTTATGAC
TATAATTGATGTGGCCGACTGACTGTTTGGTGTTAAGGATCTTGTGTTTA
TCTTGGTTTTCTGTACTTAGAAGAGAGTGCCGGTGGCATGGTGGTCGATA
TAACTAGAGCAATGCGTGTCTCCATCCTCATCCTCATCGGCCATCCCTTA
TACCCTGATGGCGCTGAAGGGTGAGAATGGCGATGGGCGAGAATAATATA
CTGTGTATAGTCTGTCCTATCCTCCTTGTGCACTGCAAAGTCAGTTGGTC
ATCATCCCCACTCAATCGTCCACTCTTGCTCTATATCCGAGACAAACCAC
ACTCATCCCAATTTAAGCCCGAG back to topCoding sequence (CDS) from alignment at ch1:2111076..2114198- >KJC3_000848-T1 ID=KJC3_000848-T1|Name=KJC3_000848-T1|organism=Aspergillus niger KJC3|type=CDS|length=3714bp|location=Sequence derived from alignment at ch1:2111076..2114198- (Aspergillus niger KJC3)
ACTTTTTTGATGCTTCATGGACCTCGCTTCAGAGTCTAGCCTCGTCAGTA
CTAGGAAGCGATATTGCACGGCCGGCAACTACCAACGGAAGTGCTAGGGG
GCATGTGAGGAAACCTTCCCGCCCAGATCCTTATATGAGACCCCCTGCAC
GAACGTCGACACCAGCAACCTGGGGTCCCTCGGCCCCGTCTACACCGGAG
ATTGGAAGCGGAACCCAGGAAGAGAGACAGGCACTAGTACAGGCAAAGAA
AAGGGAGGCCCTGTTATTGGCAGACACGGGTCCGGCATGGAGTACAACCC
CGCGACACAAACGCCGGGATTCTAGCGATCGGACGGGTCTTTCGAATATT
GACCCTGACCTCGACGAGGACGCCTTAGCTTATATACATCATGTACAATC
CACAGATACCATTACCGGTGTTACGATACGATATGGGTGCCAGCCTGCGG
TATTCCGAAAGGCCAACGGCTTCTGGCCCAGCGATAGCATTCAGGGCCGA
AAAACCGTCCTCCTGCCGGTTGATTCGTGCTCGATCAAAGGACGCCCAAT
CCGGCCTAAGATGGGAGAGGATCTGCTAGGAGATGATCATCAGGAACGCG
AGTCTTTGGAAGATATGAACGGCAGCTCGATAGCGCCTACTTCAGCGCCT
ACGTCTGCCGAGGGAGCAACATCTGCATCTCCTGCAGCGGAGATCGAAGG
TGACCGAATCTGGAAGCACGAGTCATGGGTGCATATCGAGGGCTTTCCGG
GGCCGGTTGAAATCGGCCGCGTCCCGCGGAGAGCGTTGGGTTTCTTCCCA
CGAACGCGACGGAAATCCGTTTCTTATTCGGACTCGGTGTCGTCTCCATT
GTCAGGCCGGGGAGGCACAACCGCTCCTTCGTCGCCTTCGCCAATCGAGT
CGGCATCGGCGCAGCCAGTTATTCCTCCATGGGCTCGCCCGCATGCTGAT
TCGTCTGCATCACGTACCTCTTCTAAGGGCAGGCCGGGCATTCGCCATCA
ACGCCAGCGCAGCAACATCCAATTGTCGGGACCTGGCGTTGGCACTCTCG
ACCATGATTCAAATGCGCCAGGCCCCGCCATGGACGGACTTAGCAAATTC
TTTGCCCAGCATTTGCCAAATCTTGCGCCCGTGGCACGCCCACCGGATTT
TGAAAGTTCGTCGGAAAGTGCGTCGACCGCGGCCGCGAACACCCCAACCA
GTCTGGACAACCTTGGCGGAGCAGTAGAGTCCTGGGTCAGGAAGATGACG
ACCCGAGCCAAGGCCAGCTTGAATGAACTGCAACAGACGCAAGGCCCGGC
AACCCATGACCCCGCACAGGCCATGGGGCGACGCGGCAACGGCGATCTCA
TCGAGCTGAACGATGGGTTGGAGTCTCGCAGCTCGTCGAATGCGATCTCC
GAGCCTCGGTGGAGACCCGATTTGCTACGGTCGGGGTCAAGCCTTCACGA
AGGAACAGCGTTGCGGGGACGTTTCCTCAGCCCTTCACCTGGGACGAGCC
GGACTCGTTCTGGGGGGGACAGGGCGAAAGATGATTGAATGAGTTCCAAC
GGCGGCTTTGCCGACCTCTTTAGCCTTGGGACCGCGAGCACGACAAATAC
CGGCCGAAGATCCACCTCGACCATTCGATCGCGCAACCGCCGTCTGATAT
CATTCACAGAGGATGAAGTCGACGAGAATGGCAAACAAATGCAGTCCTCC
GGGTTGTCGTCGATGTTATCCCCCGATAACTCCGCTGTTCGCTCCCGCGG
TGCTACACCTTCACCTAACCCGTCCCGCGGAGTGTCCCCCATACCCATGA
GACATCCCTCTCGAGCAACCGAAGCTGCCAACCGTAGCAAAGGAAACAGC
TCCTTAGACTTTTTTGATGCTTCATGGACCTCGCTTCAGAGTCTAGCCTC
GTCAGTACTAGGAAGCGATATTGCACGGCCGGCAACTACCAACGGAAGTG
CTAGGGGGCATGTGAGGAAACCTTCCCGCCCAGATCCTTATATGAGACCC
CCTGCACGAACGTCGACACCAGCAACCTGGGGTCCCTCGGCCCCGTCTAC
ACCGGAGATTGGAAGCGGAACCCAGGAAGAGAGACAGGCACTAGTACAGG
CAAAGAAAAGGGAGGCCCTGTTATTGGCAGACACGGGTCCGGCATGGAGT
ACAACCCCGCGACACAAACGCCGGGATTCTAGCGATCGGACGGGTCTTTC
GAATATTGACCCTGACCTCGACGAGGACGCCTTAGCTTATATACATCATG
TACAATCCACAGATACCATTACCGGTGTTACGATACGATATGGGTGCCAG
CCTGCGGTATTCCGAAAGGCCAACGGCTTCTGGCCCAGCGATAGCATTCA
GGGCCGAAAAACCGTCCTCCTGCCGGTTGATTCGTGCTCGATCAAAGGAC
GCCCAATCCGGCCTAAGATGGGAGAGGATCTGCTAGGAGATGATCATCAG
GAACGCGAGTCTTTGGAAGATATGAACGGCAGCTCGATAGCGCCTACTTC
AGCGCCTACGTCTGCCGAGGGAGCAACATCTGCATCTCCTGCAGCGGAGA
TCGAAGGTGACCGAATCTGGAAGCACGAGTCATGGGTGCATATCGAGGGC
TTTCCGGGGCCGGTTGAAATCGGCCGCGTCCCGCGGAGAGCGTTGGGTTT
CTTCCCACGAACGCGACGGAAATCCGTTTCTTATTCGGACTCGGTGTCGT
CTCCATTGTCAGGCCGGGGAGGCACAACCGCTCCTTCGTCGCCTTCGCCA
ATCGAGTCGGCATCGGCGCAGCCAGTTATTCCTCCATGGGCTCGCCCGCA
TGCTGATTCGTCTGCATCACGTACCTCTTCTAAGGGCAGGCCGGGCATTC
GCCATCAACGCCAGCGCAGCAACATCCAATTGTCGGGACCTGGCGTTGGC
ACTCTCGACCATGATTCAAATGCGCCAGGCCCCGCCATGGACGGACTTAG
CAAATTCTTTGCCCAGCATTTGCCAAATCTTGCGCCCGTGGCACGCCCAC
CGGATTTTGAAAGTTCGTCGGAAAGTGCGTCGACCGCGGCCGCGAACACC
CCAACCAGTCTGGACAACCTTGGCGGAGCAGTAGAGTCCTGGGTCAGGAA
GATGACGACCCGAGCCAAGGCCAGCTTGAATGAACTGCAACAGACGCAAG
GCCCGGCAACCCATGACCCCGCACAGGCCATGGGGCGACGCGGCAACGGC
GATCTCATCGAGCTGAACGATGGGTTGGAGTCTCGCAGCTCGTCGAATGC
GATCTCCGAGCCTCGGTGGAGACCCGATTTGCTACGGTCGGGGTCAAGCC
TTCACGAAGGAACAGCGTTGCGGGGACGTTTCCTCAGCCCTTCACCTGGG
ACGAGCCGGACTCGTTCTGGGGGGGACAGGGCGAAAGATGATTGAATGAG
TTCCAACGGCGGCTTTGCCGACCTCTTTAGCCTTGGGACCGCGAGCACGA
CAAATACCGGCCGAAGATCCACCTCGACCATTCGATCGCGCAACCGCCGT
CTGATATCATTCACAGAGGATGAAGTCGACGAGAATGGCAAACAAATGCA
GTCCTCCGGGTTGTCGTCGATGTTATCCCCCGATAACTCCGCTGTTCGCT
CCCGCGGTGCTACACCTTCACCTAACCCGTCCCGCGGAGTGTCCCCCATA
CCCATGAGACATCCCTCTCGAGCAACCGAAGCTGCCAACCGTAGCAAAGG
AAACAGCTCCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000848-T1.utr3p1 | KJC3_000848-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000848-T1.utr5p1 | KJC3_000848-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036779 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2111076..2114198 - |
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