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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2131417..2133522+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000854-T1 ID=KJC3_000854-T1|Name=KJC3_000854-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2106bp|location=Sequence derived from alignment at ch1:2131417..2133522+ (Aspergillus niger KJC3)
GTACTTATTATGTATGTCGGGCGCGAGGCTAACAAACTCCGAACCCTTTT
CTTCTTTGCAATGGACCTGTAATCCCGTCGGGCTCCCGTGCCTTAATCCC
TCGTTTTGGACTGCGAACCTGTTCGCCATCCCCCAAACCCCCGAACATCT
GTCTCACTCATCCGTCTTCCCCGGCAATTGTCTTCTCCTGCGCTGGTCTG
GATGACGTTGTTCGAGCAGTCGCTGTAACCTCCTTCTCTTCACCTCGGGC
GATCCTATCTCGGCCCTAGACTTGCTCATTCTTTTTGTCTCTTTTTTTCC
CTCTCTCTCTCTTTCACTTCTCGCCTGATCGCCATCCCGACCGGTGAAAC
AATACCATGCCTCGGAACGCGCTCTCCTCCGAAGCGCCTCTCCCCATGTC
CGCCATCACAGAGCAGTCCATATCGTCAGATTGGAATACCAACCGTTTAG
GGGCGCGACTGGGAGTCGATATCGCCAGCGCCGCAACTGCGGGTGCCTTG
ACATGTCCTGTCATCACCGTTATTGATCGGTATGCTACTTACTACCTACC
CCGATACATCATCCTCCTATCGTCGAGAGAGATAGCGAGAGAAAGAGCTA
TAAGCTAATGAAATCAATTCCTTGAACCAGCGCGATCATCGAGAAAGCAG
CCAAGGGTGTCCCCATCCGCCAGACCATCACATCCTGCTTCCGATCCATG
TTCACAAAACCGGGGAGCTTCTTCCTCAGCACCCCATTCCTCCTTATCTA
CACCCTGTACACGTCCACCTACCTCACTGCGAACACCATTGACACCTTCA
CCTCCACCGTGCGCGACAAGCCCTTCTCAACCGTCTTCCCCGGTACCGCC
AAATTCCTCACCACCACCGCAGTGAACATGGGTATTTGCGTATACAAGGA
CGCCAGGTTTGCGCGCATCTTCGGTGCAAAACCTTCTCCTGCTGCTACAC
CTGGATCTACATCTACGCCCCAGCCCGCTTCCAGATCTACATCCGCATCC
ACCCCAGCCTCCTGCCACCCCTCCGGCGCCGCCAAAGTCCCCAAGATCTC
CTACGGCCTCTTCTGTCTCCGCGACAGCATCACCATCTTTGCCTCCTTCA
ACATCCCCGCCCTTGTCGCCCCCTCCATCCCCGATTCTATCGCCGCCACG
CCCGGAATGAAGGCTGCGCTCGCGCAATTCTCCTGTCCGGCTCTGATGCA
GTTCGCTAGCACGCCTATGCATCTGCTCGGATTGGATCTGTATAACCGGC
AACCGCCAGGCGGATTGGGATGGCGTGAGCGCGCTTCGCGCATCAGACGC
GACTACATCCCCAGTTGCTTTGCGCGCATGGGCAAGATCGTTCCGGCGTA
TGGTGTGGGTGGTGTGGTGAATGTGCGGATGAGAGCTTCGCTAATGGAGT
ATCTGGAGGGCGGGAAGTAACCGTTTCCCACACAACTGCTTACTTTCTTA
TTTGTTTGTGACGACGATGATGACGATGATACTCCCCCTTTTGGCAAGAT
CTAGTTTACGATCCTTAGATCTTTCCGTTGGGGGAGTGGCTATTTACAGT
GCATATATGCAACACATGACATATACTTTATAGACAGAGGCGGGGTGTCT
TCTCTGCCCTGCCCTGCCCTGCCCTGCCCTGCCCTGCTCTGCTCTGTTCT
GTTCTTGTTCAGACTTGCGTTTGCTTCTTTTCTATACTACACTCTACTCT
CCACTCATAGAGTCACGGGTCCGGCGTCCTAATTTTTTATTATTTTTCTT
TCGGATCGGTGTTCTATGTGTGTTCTGTTCGGGTTATAGATTTAGAGAAT
CTGACTTACTAGCTAATGTCTGGTTTTGGATGATTACGAGATGAGATGCA
CTTGTTCTGTCTGTGTTAATCTATCTTATATCAGCTTGTTGGGACTGTGT
TGTGTGATGGCTTGATTATCTAGATTATTTATGCTCAGTGCATTCAGTTC
CGTGGAACTGATCATGTCCGTCTGGTGCTGGTTTCTTGTATTTCTTGAGA
TGGTTTGGATGAGTTAGTATTCTATCGATCAGATCGAAGAGGAGCCGTTG
GAGAAGTGGTCTAGATGTATTGAATGAATAGAAACTCATACGATATGTTA
TTATCA back to topCoding sequence (CDS) from alignment at ch1:2131417..2133522+ >KJC3_000854-T1 ID=KJC3_000854-T1|Name=KJC3_000854-T1|organism=Aspergillus niger KJC3|type=CDS|length=1926bp|location=Sequence derived from alignment at ch1:2131417..2133522+ (Aspergillus niger KJC3)
ATGCCTCGGAACGCGCTCTCCTCCGAAGCGCCTCTCCCCATGTCCGCCAT
CACAGAGCAGTCCATATCGTCAGATTGGAATACCAACCGTTTAGGGGCGC
GACTGGGAGTCGATATCGCCAGCGCCGCAACTGCGGGTGCCTTGACATGT
CCTGTCATCACCGTTATTGATCGCGCGATCATCGAGAAAGCAGCCAAGGG
TGTCCCCATCCGCCAGACCATCACATCCTGCTTCCGATCCATGTTCACAA
AACCGGGGAGCTTCTTCCTCAGCACCCCATTCCTCCTTATCTACACCCTG
TACACGTCCACCTACCTCACTGCGAACACCATTGACACCTTCACCTCCAC
CGTGCGCGACAAGCCCTTCTCAACCGTCTTCCCCGGTACCGCCAAATTCC
TCACCACCACCGCAGTGAACATGGGTATTTGCGTATACAAGGACGCCAGG
TTTGCGCGCATCTTCGGTGCAAAACCTTCTCCTGCTGCTACACCTGGATC
TACATCTACGCCCCAGCCCGCTTCCAGATCTACATCCGCATCCACCCCAG
CCTCCTGCCACCCCTCCGGCGCCGCCAAAGTCCCCAAGATCTCCTACGGC
CTCTTCTGTCTCCGCGACAGCATCACCATCTTTGCCTCCTTCAACATCCC
CGCCCTTGTCGCCCCCTCCATCCCCGATTCTATCGCCGCCACGCCCGGAA
TGAAGGCTGCGCTCGCGCAATTCTCCTGTCCGGCTCTGATGCAGTTCGCT
AGCACGCCTATGCATCTGCTCGGATTGGATCTGTATAACCGGCAACCGCC
AGGCGGATTGGGATGGCGTGAGCGCGCTTCGCGCATCAGACGCGACTACA
TCCCCAGTTGCTTTGCGCGCATGGGCAAGATCGTTCCGGCGTATGGTGTG
GGTGGTGTGGTGAATGTGCGGATGAGAGCTTCGCTAATGGAGTATCTGGA
GGGCGGGAAGTAAATGCCTCGGAACGCGCTCTCCTCCGAAGCGCCTCTCC
CCATGTCCGCCATCACAGAGCAGTCCATATCGTCAGATTGGAATACCAAC
CGTTTAGGGGCGCGACTGGGAGTCGATATCGCCAGCGCCGCAACTGCGGG
TGCCTTGACATGTCCTGTCATCACCGTTATTGATCGCGCGATCATCGAGA
AAGCAGCCAAGGGTGTCCCCATCCGCCAGACCATCACATCCTGCTTCCGA
TCCATGTTCACAAAACCGGGGAGCTTCTTCCTCAGCACCCCATTCCTCCT
TATCTACACCCTGTACACGTCCACCTACCTCACTGCGAACACCATTGACA
CCTTCACCTCCACCGTGCGCGACAAGCCCTTCTCAACCGTCTTCCCCGGT
ACCGCCAAATTCCTCACCACCACCGCAGTGAACATGGGTATTTGCGTATA
CAAGGACGCCAGGTTTGCGCGCATCTTCGGTGCAAAACCTTCTCCTGCTG
CTACACCTGGATCTACATCTACGCCCCAGCCCGCTTCCAGATCTACATCC
GCATCCACCCCAGCCTCCTGCCACCCCTCCGGCGCCGCCAAAGTCCCCAA
GATCTCCTACGGCCTCTTCTGTCTCCGCGACAGCATCACCATCTTTGCCT
CCTTCAACATCCCCGCCCTTGTCGCCCCCTCCATCCCCGATTCTATCGCC
GCCACGCCCGGAATGAAGGCTGCGCTCGCGCAATTCTCCTGTCCGGCTCT
GATGCAGTTCGCTAGCACGCCTATGCATCTGCTCGGATTGGATCTGTATA
ACCGGCAACCGCCAGGCGGATTGGGATGGCGTGAGCGCGCTTCGCGCATC
AGACGCGACTACATCCCCAGTTGCTTTGCGCGCATGGGCAAGATCGTTCC
GGCGTATGGTGTGGGTGGTGTGGTGAATGTGCGGATGAGAGCTTCGCTAA
TGGAGTATCTGGAGGGCGGGAAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000854-T1.utr5p1 | KJC3_000854-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000854-T1.utr3p1 | KJC3_000854-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2131417..2133522 + |
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