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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2139367..2141633+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000857-T2 ID=KJC3_000857-T2|Name=KJC3_000857-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2267bp|location=Sequence derived from alignment at ch1:2139367..2141633+ (Aspergillus niger KJC3)
ACTAAGTATCCTCGCTTGCAAATCTACGGCGCCTTGCAGCGCTCACTTGG
CTCAGCCCTCTTGTCAATTGACCCTTTCGTTTCTCTTGGATAGGCTCGCG
CCCTTATCTCAGGGACATCGAGCTCAGCGAGGGATACAATGCCTGGGATT
TCGATTGAGAATGAAGTCAAACATGATAATCCATCGACTATCTCTCGAGA
TGTCGTCACCGAGTCTAGCGGAGAAGAGAGCCGGTCAGCTGCACCACCAC
CCATCTTCAACGAGCAGACGAATTATGTCCCACTGAGCACTATCATCACG
GTATCTTCCACTACATGGACGCTCAACCACCAACTATCTATCTAACCTGT
CGCAGATATTCCTAGCATGCTCGACAGTTGATTTCGTAGCGGTCATGGAC
CAAACCACTCTAGCCGGGAGTTTATCCATAATCGGCAATACATTAAATGC
CAGCAACAAAACCTCCTGGATATCAGGAGGGTATTTTGTGTATGTCGAGT
TAGCAGCCAGACGTGATCCCCAAGTAGCTAACCCAATACAGAACATCAAC
CTGTTTCCAACTTTTATACGGACGACTCTCTGACATCTGGTCCCGAAAAT
ACGTCCTATACATAGGTCTCGCCATCATGTTCATCGGATCCCTGGCATCA
TCTCTAGCACAGACCGCCACGCAGCTCATCATTTTCCGCGCCTTCACCGG
CATGGGCGGCGGCGGAATCACGTCCATCGCACAGATGATAGTCAGTGACG
TGGTTCCACTCCGCGAGCGAGGTAAATATCAAGGCATTCTTGGTGCAGTA
ATAGCTATCGCCAACGGAATCGGCCCTGTGATTGGCGGTGCTCTATCCCC
GATATCCCACAACTCGTGGAGATGGATCTTCCGACTTATGCTGCCACTCA
CGGCTATCTCAATCCTCGCTGTGATGTTCTTCATGCCTTTGCGGAAGGTC
ACCGGTAACTGGAAAGTGAAGCTGAAAGCCGTTGATTTCTTCGGTGTCTT
TCTAGCTCTAGGAGGCACGGCGGTGCTTATGCTCGGATTGACATGGGGCG
GTGGCGATTATGTCTGGAAATCGGCACATGTTATAGCAACGCTCATCGTG
GGGGCTGCAGTGTGTGTGGCTTTTGTCCTGTGGGAATGGAAAGGTCATCC
GTATCCGCTGATACCTATGCATATCTTTAAATCTCGCATTGTGAACGGCG
CGTGCCTGACCATGTTCATCAACGGGTGGAATATCATAGTCATGCTTTAC
TACATTCCGACTTTCTACCAGCTTGTGTTCGGTTATTCGACTACCAAAGC
TGGTGCCATGGTATTACCCATCACGTTGTTGCAGAGTACGTTGCCTTGCC
CTACGATCATATCCAGCCATTCTATCCCATGCTTATTATAAACGCGCAGC
CCTGAGCAGCACCTTCTCCGGCCTAATCGTCCACTGGATCGGCCGATATC
GCGAATCCATCCTCGTCGGCTGGATGATCTGGGCCATCGGACTAGGCCTG
ATGTCGACTCTGAACGAGACATCCAATCTAGGAAAGCAGATAGGCTACGG
TCTCTTGACAGGTATAGGTTCAGGGAATACATTACAGCCGTGAGACTGTC
CCCTCCCCCCTACATATCCCATAATTACCTACAACACCAACTTACCCACC
CTCAGGGCCCTAATCGCCGTCCAAGCCGGCGTCGCAAGACGAGACATGGC
CGTAGTAACCTCATTCCGAAAGTACATCCATCCCCCCACCCTCCACGTCT
ATCCTATCTCCCACCCACTAACACCGACCACCAAATACAGCTTCATCCGC
AACCTAGGCGGCACCCTCGGCCTCGCTGTCTCGGGCACAATCATGTACGT
ACATACCCACATAACCCTCTTCCACCTATTCATGCTAACTCCCTCCGCAG
AAACAACCTCCTCTCCACGTCCATCACCTCCCTCCACCTAACCACTGCAC
AAAAGCAATCCTTCCTTGCCAGCCCATCCAACTATCTGTCTAAACTCCCC
GCCGACGAAGCAGCACATGTTCGTGCGCTGCTTATCCCCGCGTACAAAGA
GGGATTTAGGATCGTGTTTACGGTGAATGCGGCGCTCGCAGCGCTGGCTT
TCTTCCTGGCGGTGGCGTTGATGCCGCAGGTGAAGTTGGAGAGGGCGGAT
GATGAGCGGTTGAAGGAGGAAGGGATGAGGAGGAGAGAGGAGAAGAGAGA
AGGGGAGGATTAGGGAGGTAAGTGGGAGTGGGAGTGGGAAGGGGTGAAGT
TATACACTACTAGGTCG back to topCoding sequence (CDS) from alignment at ch1:2139367..2141633+ >KJC3_000857-T2 ID=KJC3_000857-T2|Name=KJC3_000857-T2|organism=Aspergillus niger KJC3|type=CDS|length=6660bp|location=Sequence derived from alignment at ch1:2139367..2141633+ (Aspergillus niger KJC3)
ATGTTCATCGGATCCCTGGCATCATCTCTAGCACAGACCGCCACGCAGCT
CATCATTTTCCGCGCCTTCACCGGCATGGGCGGCGGCGGAATCACGTCCA
TCGCACAGATGATAGTCAGTGACGTGGTTCCACTCCGCGAGCGAGGTAAA
TATCAAGGCATTCTTGGTGCAGTAATAGCTATCGCCAACGGAATCGGCCC
TGTGATTGGCGGTGCTCTATCCCCGATATCCCACAACTCGTGGAGATGGA
TCTTCCGACTTATGCTGCCACTCACGGCTATCTCAATCCTCGCTGTGATG
TTCTTCATGCCTTTGCGGAAGGTCACCGGTAACTGGAAAGTGAAGCTGAA
AGCCGTTGATTTCTTCGGTGTCTTTCTAGCTCTAGGAGGCACGGCGGTGC
TTATGCTCGGATTGACATGGGGCGGTGGCGATTATGTCTGGAAATCGGCA
CATGTTATAGCAACGCTCATCGTGGGGGCTGCAGTGTGTGTGGCTTTTGT
CCTGTGGGAATGGAAAGGTCATCCGTATCCGCTGATACCTATGCATATCT
TTAAATCTCGCATTGTGAACGGCGCGTGCCTGACCATGTTCATCAACGGG
TGGAATATCATAGTCATGCTTTACTACATTCCGACTTTCTACCAGCTTGT
GTTCGGTTATTCGACTACCAAAGCTGGTGCCATGGTATTACCCATCACGT
TGTTGCAGACCCTGAGCAGCACCTTCTCCGGCCTAATCGTCCACTGGATC
GGCCGATATCGCGAATCCATCCTCGTCGGCTGGATGATCTGGGCCATCGG
ACTAGGCCTGATGTCGACTCTGAACGAGACATCCAATCTAGGAAAGCAGA
TAGGCTACGGTCTCTTGACAGGTATAGGTTCAGGGAATACATTACAGCCG
GCCCTAATCGCCGTCCAAGCCGGCGTCGCAAGACGAGACATGGCCGTAGT
AACCTCATTCCGAAACTTCATCCGCAACCTAGGCGGCACCCTCGGCCTCG
CTGTCTCGGGCACAATCATAAACAACCTCCTCTCCACGTCCATCACCTCC
CTCCACCTAACCACTGCACAAAAGCAATCCTTCCTTGCCAGCCCATCCAA
CTATCTGTCTAAACTCCCCGCCGACGAAGCAGCACATGTTCGTGCGCTGC
TTATCCCCGCGTACAAAGAGGGATTTAGGATCGTGTTTACGGTGAATGCG
GCGCTCGCAGCGCTGGCTTTCTTCCTGGCGGTGGCGTTGATGCCGCAGGT
GAAGTTGGAGAGGGCGGATGATGAGCGGTTGAAGGAGGAAGGGATGAGGA
GGAGAGAGGAGAAGAGAGAAGGGGAGGATTAGATGTTCATCGGATCCCTG
GCATCATCTCTAGCACAGACCGCCACGCAGCTCATCATTTTCCGCGCCTT
CACCGGCATGGGCGGCGGCGGAATCACGTCCATCGCACAGATGATAGTCA
GTGACGTGGTTCCACTCCGCGAGCGAGGTAAATATCAAGGCATTCTTGGT
GCAGTAATAGCTATCGCCAACGGAATCGGCCCTGTGATTGGCGGTGCTCT
ATCCCCGATATCCCACAACTCGTGGAGATGGATCTTCCGACTTATGCTGC
CACTCACGGCTATCTCAATCCTCGCTGTGATGTTCTTCATGCCTTTGCGG
AAGGTCACCGGTAACTGGAAAGTGAAGCTGAAAGCCGTTGATTTCTTCGG
TGTCTTTCTAGCTCTAGGAGGCACGGCGGTGCTTATGCTCGGATTGACAT
GGGGCGGTGGCGATTATGTCTGGAAATCGGCACATGTTATAGCAACGCTC
ATCGTGGGGGCTGCAGTGTGTGTGGCTTTTGTCCTGTGGGAATGGAAAGG
TCATCCGTATCCGCTGATACCTATGCATATCTTTAAATCTCGCATTGTGA
ACGGCGCGTGCCTGACCATGTTCATCAACGGGTGGAATATCATAGTCATG
CTTTACTACATTCCGACTTTCTACCAGCTTGTGTTCGGTTATTCGACTAC
CAAAGCTGGTGCCATGGTATTACCCATCACGTTGTTGCAGACCCTGAGCA
GCACCTTCTCCGGCCTAATCGTCCACTGGATCGGCCGATATCGCGAATCC
ATCCTCGTCGGCTGGATGATCTGGGCCATCGGACTAGGCCTGATGTCGAC
TCTGAACGAGACATCCAATCTAGGAAAGCAGATAGGCTACGGTCTCTTGA
CAGGTATAGGTTCAGGGAATACATTACAGCCGGCCCTAATCGCCGTCCAA
GCCGGCGTCGCAAGACGAGACATGGCCGTAGTAACCTCATTCCGAAACTT
CATCCGCAACCTAGGCGGCACCCTCGGCCTCGCTGTCTCGGGCACAATCA
TAAACAACCTCCTCTCCACGTCCATCACCTCCCTCCACCTAACCACTGCA
CAAAAGCAATCCTTCCTTGCCAGCCCATCCAACTATCTGTCTAAACTCCC
CGCCGACGAAGCAGCACATGTTCGTGCGCTGCTTATCCCCGCGTACAAAG
AGGGATTTAGGATCGTGTTTACGGTGAATGCGGCGCTCGCAGCGCTGGCT
TTCTTCCTGGCGGTGGCGTTGATGCCGCAGGTGAAGTTGGAGAGGGCGGA
TGATGAGCGGTTGAAGGAGGAAGGGATGAGGAGGAGAGAGGAGAAGAGAG
AAGGGGAGGATTAGATGTTCATCGGATCCCTGGCATCATCTCTAGCACAG
ACCGCCACGCAGCTCATCATTTTCCGCGCCTTCACCGGCATGGGCGGCGG
CGGAATCACGTCCATCGCACAGATGATAGTCAGTGACGTGGTTCCACTCC
GCGAGCGAGGTAAATATCAAGGCATTCTTGGTGCAGTAATAGCTATCGCC
AACGGAATCGGCCCTGTGATTGGCGGTGCTCTATCCCCGATATCCCACAA
CTCGTGGAGATGGATCTTCCGACTTATGCTGCCACTCACGGCTATCTCAA
TCCTCGCTGTGATGTTCTTCATGCCTTTGCGGAAGGTCACCGGTAACTGG
AAAGTGAAGCTGAAAGCCGTTGATTTCTTCGGTGTCTTTCTAGCTCTAGG
AGGCACGGCGGTGCTTATGCTCGGATTGACATGGGGCGGTGGCGATTATG
TCTGGAAATCGGCACATGTTATAGCAACGCTCATCGTGGGGGCTGCAGTG
TGTGTGGCTTTTGTCCTGTGGGAATGGAAAGGTCATCCGTATCCGCTGAT
ACCTATGCATATCTTTAAATCTCGCATTGTGAACGGCGCGTGCCTGACCA
TGTTCATCAACGGGTGGAATATCATAGTCATGCTTTACTACATTCCGACT
TTCTACCAGCTTGTGTTCGGTTATTCGACTACCAAAGCTGGTGCCATGGT
ATTACCCATCACGTTGTTGCAGACCCTGAGCAGCACCTTCTCCGGCCTAA
TCGTCCACTGGATCGGCCGATATCGCGAATCCATCCTCGTCGGCTGGATG
ATCTGGGCCATCGGACTAGGCCTGATGTCGACTCTGAACGAGACATCCAA
TCTAGGAAAGCAGATAGGCTACGGTCTCTTGACAGGTATAGGTTCAGGGA
ATACATTACAGCCGGCCCTAATCGCCGTCCAAGCCGGCGTCGCAAGACGA
GACATGGCCGTAGTAACCTCATTCCGAAACTTCATCCGCAACCTAGGCGG
CACCCTCGGCCTCGCTGTCTCGGGCACAATCATAAACAACCTCCTCTCCA
CGTCCATCACCTCCCTCCACCTAACCACTGCACAAAAGCAATCCTTCCTT
GCCAGCCCATCCAACTATCTGTCTAAACTCCCCGCCGACGAAGCAGCACA
TGTTCGTGCGCTGCTTATCCCCGCGTACAAAGAGGGATTTAGGATCGTGT
TTACGGTGAATGCGGCGCTCGCAGCGCTGGCTTTCTTCCTGGCGGTGGCG
TTGATGCCGCAGGTGAAGTTGGAGAGGGCGGATGATGAGCGGTTGAAGGA
GGAAGGGATGAGGAGGAGAGAGGAGAAGAGAGAAGGGGAGGATTAGATGT
TCATCGGATCCCTGGCATCATCTCTAGCACAGACCGCCACGCAGCTCATC
ATTTTCCGCGCCTTCACCGGCATGGGCGGCGGCGGAATCACGTCCATCGC
ACAGATGATAGTCAGTGACGTGGTTCCACTCCGCGAGCGAGGTAAATATC
AAGGCATTCTTGGTGCAGTAATAGCTATCGCCAACGGAATCGGCCCTGTG
ATTGGCGGTGCTCTATCCCCGATATCCCACAACTCGTGGAGATGGATCTT
CCGACTTATGCTGCCACTCACGGCTATCTCAATCCTCGCTGTGATGTTCT
TCATGCCTTTGCGGAAGGTCACCGGTAACTGGAAAGTGAAGCTGAAAGCC
GTTGATTTCTTCGGTGTCTTTCTAGCTCTAGGAGGCACGGCGGTGCTTAT
GCTCGGATTGACATGGGGCGGTGGCGATTATGTCTGGAAATCGGCACATG
TTATAGCAACGCTCATCGTGGGGGCTGCAGTGTGTGTGGCTTTTGTCCTG
TGGGAATGGAAAGGTCATCCGTATCCGCTGATACCTATGCATATCTTTAA
ATCTCGCATTGTGAACGGCGCGTGCCTGACCATGTTCATCAACGGGTGGA
ATATCATAGTCATGCTTTACTACATTCCGACTTTCTACCAGCTTGTGTTC
GGTTATTCGACTACCAAAGCTGGTGCCATGGTATTACCCATCACGTTGTT
GCAGACCCTGAGCAGCACCTTCTCCGGCCTAATCGTCCACTGGATCGGCC
GATATCGCGAATCCATCCTCGTCGGCTGGATGATCTGGGCCATCGGACTA
GGCCTGATGTCGACTCTGAACGAGACATCCAATCTAGGAAAGCAGATAGG
CTACGGTCTCTTGACAGGTATAGGTTCAGGGAATACATTACAGCCGGCCC
TAATCGCCGTCCAAGCCGGCGTCGCAAGACGAGACATGGCCGTAGTAACC
TCATTCCGAAACTTCATCCGCAACCTAGGCGGCACCCTCGGCCTCGCTGT
CTCGGGCACAATCATAAACAACCTCCTCTCCACGTCCATCACCTCCCTCC
ACCTAACCACTGCACAAAAGCAATCCTTCCTTGCCAGCCCATCCAACTAT
CTGTCTAAACTCCCCGCCGACGAAGCAGCACATGTTCGTGCGCTGCTTAT
CCCCGCGTACAAAGAGGGATTTAGGATCGTGTTTACGGTGAATGCGGCGC
TCGCAGCGCTGGCTTTCTTCCTGGCGGTGGCGTTGATGCCGCAGGTGAAG
TTGGAGAGGGCGGATGATGAGCGGTTGAAGGAGGAAGGGATGAGGAGGAG
AGAGGAGAAGAGAGAAGGGGAGGATTAGATGTTCATCGGATCCCTGGCAT
CATCTCTAGCACAGACCGCCACGCAGCTCATCATTTTCCGCGCCTTCACC
GGCATGGGCGGCGGCGGAATCACGTCCATCGCACAGATGATAGTCAGTGA
CGTGGTTCCACTCCGCGAGCGAGGTAAATATCAAGGCATTCTTGGTGCAG
TAATAGCTATCGCCAACGGAATCGGCCCTGTGATTGGCGGTGCTCTATCC
CCGATATCCCACAACTCGTGGAGATGGATCTTCCGACTTATGCTGCCACT
CACGGCTATCTCAATCCTCGCTGTGATGTTCTTCATGCCTTTGCGGAAGG
TCACCGGTAACTGGAAAGTGAAGCTGAAAGCCGTTGATTTCTTCGGTGTC
TTTCTAGCTCTAGGAGGCACGGCGGTGCTTATGCTCGGATTGACATGGGG
CGGTGGCGATTATGTCTGGAAATCGGCACATGTTATAGCAACGCTCATCG
TGGGGGCTGCAGTGTGTGTGGCTTTTGTCCTGTGGGAATGGAAAGGTCAT
CCGTATCCGCTGATACCTATGCATATCTTTAAATCTCGCATTGTGAACGG
CGCGTGCCTGACCATGTTCATCAACGGGTGGAATATCATAGTCATGCTTT
ACTACATTCCGACTTTCTACCAGCTTGTGTTCGGTTATTCGACTACCAAA
GCTGGTGCCATGGTATTACCCATCACGTTGTTGCAGACCCTGAGCAGCAC
CTTCTCCGGCCTAATCGTCCACTGGATCGGCCGATATCGCGAATCCATCC
TCGTCGGCTGGATGATCTGGGCCATCGGACTAGGCCTGATGTCGACTCTG
AACGAGACATCCAATCTAGGAAAGCAGATAGGCTACGGTCTCTTGACAGG
TATAGGTTCAGGGAATACATTACAGCCGGCCCTAATCGCCGTCCAAGCCG
GCGTCGCAAGACGAGACATGGCCGTAGTAACCTCATTCCGAAACTTCATC
CGCAACCTAGGCGGCACCCTCGGCCTCGCTGTCTCGGGCACAATCATAAA
CAACCTCCTCTCCACGTCCATCACCTCCCTCCACCTAACCACTGCACAAA
AGCAATCCTTCCTTGCCAGCCCATCCAACTATCTGTCTAAACTCCCCGCC
GACGAAGCAGCACATGTTCGTGCGCTGCTTATCCCCGCGTACAAAGAGGG
ATTTAGGATCGTGTTTACGGTGAATGCGGCGCTCGCAGCGCTGGCTTTCT
TCCTGGCGGTGGCGTTGATGCCGCAGGTGAAGTTGGAGAGGGCGGATGAT
GAGCGGTTGAAGGAGGAAGGGATGAGGAGGAGAGAGGAGAAGAGAGAAGG
GGAGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000857-T2.utr5p1 | KJC3_000857-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000857-T2.utr3p1 | KJC3_000857-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06609 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2139367..2141633 + |
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