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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2149185..2151250+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000860-T1 ID=KJC3_000860-T1|Name=KJC3_000860-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2066bp|location=Sequence derived from alignment at ch1:2149185..2151250+ (Aspergillus niger KJC3)
CTCCCATGGTTATTCATTCTACAAAATCGGTGTCCTGTTGCTTTCAACTT
CCCAACTCGCACTCGGTTTCCAAGATACTCCGGGGACTACCGTCCTGGTT
CGGTGACACCTTTCTTTTGTCTATCCTTATGCGACTAGTTTACCGGACTA
CCAACATGTTCTCCGTAAGATCCAATTAGACTTGTCAAAGTCAACAGCAC
CTAAAACGCAAAAGAATGACCTAGATCGACAACTCTAGTCGACGCTCCAT
GATCATGTCTGCCACCAACATCATCAACTTCCTGCTGACTCAGACATGTG
ATTCTCAGCCAACGTCATGCCACGTGCCGCTACTCCCTATATCCTTTTCA
CATTATTGTCAAAGTCCATCACATCCATATATGTCAGACACCCATTCGTG
AGGCATATAGCAGACTCTTCATGGGCTAGAGTTGGCGCATTGTGCCCATA
GAGATGCCGGCCAATCCTTCAGGCAATACATTTGTCCTCCGCAGATTCTC
CCGCTCGGATCACCTCCGAAGCTTAGTCTTTATTAGCAGTATATATCATT
GTAGCCAACGACAACAGGATATATTACTTACACATAGACCAAATCTATCA
CACTTCCCCATAAAACCACATAACAAGATACAATCTCTCACAATGCCCGA
AATTATCGACGACAAATCCCAACACTGCATCCCCTTCCTCCTCGACCGAC
TCCAAGCCCACCAAGCCCGCCATCCCACCAACACCCCGCCTTTCTTCCTC
GGTCTAAATGGCGTTCAAGGTGCCGGTAAAACAGTTTTGGTAAAACACTT
CCCAACCTTGACCACCATCTGTATTTGAAAAACCAGGTCGATTTACTAAC
AATTGACGGAATGGAAAAAAGGTCTCAACCCTCCAATCCACCCTCCGCTC
TCCACCCTACTCCCTAAACGTGGTAACCCTCTCTCTCGACGACCTGTACC
TCACGCACGCGCAACAAGAACACCTCGCCGCCTCGCACCCCTCGAACCTG
CTCCTCCAGCACCGCGGACAACCCGGCACCCATGACCTGACACTAGCGAA
GGAAGTGTTCTCGGCGTTACGCGCGGGCCAGCGCACCGCTATCCCGGCGT
ACGACAAGTCGGCGTTTTCAGGACAGGGCGATCGCGTGCCTGCGTCTCAG
TGGGAGGTGGTGAATAAGGAGGGTGAGGAGAAGGTGAAGGTGGTGATTTT
CGAGGGGTGGTGTGTTGGGTTTCGTGCGTGGGATGAGGAGGTGCTTAGGG
GGAAGTGGGAGGATGCGGTTAGGTTGAGAGAAGCTGCTACTGCTGGTCAG
GGTGAGTATAAGGGAAGATTGGGGTATGTAGGGCTTGAGGATGTGAGGAC
GGTTAATGAGGCGTTGAGGGGGTATGATGTGATTACTGAGTAAGTTTTCT
CTAGTTCTGGTGGGAGGAATTGGGGCTAATGATGATGGTAATTGCAGTCA
GTTGGATGCGCTGATCCATATGTGAGTGATTCCTGCCAGTTCTCTAGTGT
ATTATTCCAAGATGCTCATTGATTGCTTGTACAGTGATGCGCAAGACCTT
CACTTCGTCTACGATTGGCGACAGGAGCAAGAGAGGACCCTTCGCGCTGC
CAAGGGGACTGGCATGACGGAGGAACAGGTCACTAAGTTTGTTGATGGCT
GTGAGTATTGTTCTTTGGTCCAACAGTTCTATCCAAAGTACTGACAAAGG
TACAGATTATCCGTCTTATGAACTCTTCACTGAGACTCTCCGGGAGGGTA
CGTTCAAGCCTGTCCCTCATGCTACTACGGCATCTGCTCCGCCAACAGGC
TGGGAAGGAAGACAGCTTCGGTTGGTTGTGGACAAGAATAGGAGAGTGCA
GGAGATTATCAACATTTAAATGCCGGTGATTATCTGCCGCTTCCTTGATG
TTTGTGTGACAGAGGTTGGTATATGTATGGATTGACACGGGTGCATTCTG
CAATTCATTGAAGCGTTGTCGCTTCGACAAAATAGAAAGAGGGTCTCGAG
GAACTGAGAAGATAGAGAATATAGGAAGAAGAAAATTAAGGATATCCTCA
TTGGATAAAATCATAG back to topCoding sequence (CDS) from alignment at ch1:2149185..2151250+ >KJC3_000860-T1 ID=KJC3_000860-T1|Name=KJC3_000860-T1|organism=Aspergillus niger KJC3|type=CDS|length=5790bp|location=Sequence derived from alignment at ch1:2149185..2151250+ (Aspergillus niger KJC3)
ATGCCGGCCAATCCTTCAGGCAATACATTTGTCCTCCGCAGATTCTCCCG
CTCGGATCACCTCCGAAGCTTAGTCTTTATTAGCAGTATATATCATTGTA
GCCAACGACAACAGGATATATTACTTACACATAGACCAAATCTATCACAC
TTCCCCATAAAACCACATAACAAGATACAATCTCTCACAATGCCCGAAAT
TATCGACGACAAATCCCAACACTGCATCCCCTTCCTCCTCGACCGACTCC
AAGCCCACCAAGCCCGCCATCCCACCAACACCCCGCCTTTCTTCCTCGGT
CTAAATGGCGTTCAAGGTGCCGGTAAAACAGTTTTGGTCTCAACCCTCCA
ATCCACCCTCCGCTCTCCACCCTACTCCCTAAACGTGGTAACCCTCTCTC
TCGACGACCTGTACCTCACGCACGCGCAACAAGAACACCTCGCCGCCTCG
CACCCCTCGAACCTGCTCCTCCAGCACCGCGGACAACCCGGCACCCATGA
CCTGACACTAGCGAAGGAAGTGTTCTCGGCGTTACGCGCGGGCCAGCGCA
CCGCTATCCCGGCGTACGACAAGTCGGCGTTTTCAGGACAGGGCGATCGC
GTGCCTGCGTCTCAGTGGGAGGTGGTGAATAAGGAGGGTGAGGAGAAGGT
GAAGGTGGTGATTTTCGAGGGGTGGTGTGTTGGGTTTCGTGCGTGGGATG
AGGAGGTGCTTAGGGGGAAGTGGGAGGATGCGGTTAGGTTGAGAGAAGCT
GCTACTGCTGGTCAGGGTGAGTATAAGGGAAGATTGGGGTATGTAGGGCT
TGAGGATGTGAGGACGGTTAATGAGGCGTTGAGGGGGTATGATGTGATTA
CTGATCAGTTGGATGCGCTGATCCATATTGATGCGCAAGACCTTCACTTC
GTCTACGATTGGCGACAGGAGCAAGAGAGGACCCTTCGCGCTGCCAAGGG
GACTGGCATGACGGAGGAACAGGTCACTAAGTTTGTTGATGGCTATTATC
CGTCTTATGAACTCTTCACTGAGACTCTCCGGGAGGGTACGTTCAAGCCT
GTCCCTCATGCTACTACGGCATCTGCTCCGCCAACAGGCTGGGAAGGAAG
ACAGCTTCGGTTGGTTGTGGACAAGAATAGGAGAGTGCAGGAGATTATCA
ACATTTAAATGCCGGCCAATCCTTCAGGCAATACATTTGTCCTCCGCAGA
TTCTCCCGCTCGGATCACCTCCGAAGCTTAGTCTTTATTAGCAGTATATA
TCATTGTAGCCAACGACAACAGGATATATTACTTACACATAGACCAAATC
TATCACACTTCCCCATAAAACCACATAACAAGATACAATCTCTCACAATG
CCCGAAATTATCGACGACAAATCCCAACACTGCATCCCCTTCCTCCTCGA
CCGACTCCAAGCCCACCAAGCCCGCCATCCCACCAACACCCCGCCTTTCT
TCCTCGGTCTAAATGGCGTTCAAGGTGCCGGTAAAACAGTTTTGGTCTCA
ACCCTCCAATCCACCCTCCGCTCTCCACCCTACTCCCTAAACGTGGTAAC
CCTCTCTCTCGACGACCTGTACCTCACGCACGCGCAACAAGAACACCTCG
CCGCCTCGCACCCCTCGAACCTGCTCCTCCAGCACCGCGGACAACCCGGC
ACCCATGACCTGACACTAGCGAAGGAAGTGTTCTCGGCGTTACGCGCGGG
CCAGCGCACCGCTATCCCGGCGTACGACAAGTCGGCGTTTTCAGGACAGG
GCGATCGCGTGCCTGCGTCTCAGTGGGAGGTGGTGAATAAGGAGGGTGAG
GAGAAGGTGAAGGTGGTGATTTTCGAGGGGTGGTGTGTTGGGTTTCGTGC
GTGGGATGAGGAGGTGCTTAGGGGGAAGTGGGAGGATGCGGTTAGGTTGA
GAGAAGCTGCTACTGCTGGTCAGGGTGAGTATAAGGGAAGATTGGGGTAT
GTAGGGCTTGAGGATGTGAGGACGGTTAATGAGGCGTTGAGGGGGTATGA
TGTGATTACTGATCAGTTGGATGCGCTGATCCATATTGATGCGCAAGACC
TTCACTTCGTCTACGATTGGCGACAGGAGCAAGAGAGGACCCTTCGCGCT
GCCAAGGGGACTGGCATGACGGAGGAACAGGTCACTAAGTTTGTTGATGG
CTATTATCCGTCTTATGAACTCTTCACTGAGACTCTCCGGGAGGGTACGT
TCAAGCCTGTCCCTCATGCTACTACGGCATCTGCTCCGCCAACAGGCTGG
GAAGGAAGACAGCTTCGGTTGGTTGTGGACAAGAATAGGAGAGTGCAGGA
GATTATCAACATTTAAATGCCGGCCAATCCTTCAGGCAATACATTTGTCC
TCCGCAGATTCTCCCGCTCGGATCACCTCCGAAGCTTAGTCTTTATTAGC
AGTATATATCATTGTAGCCAACGACAACAGGATATATTACTTACACATAG
ACCAAATCTATCACACTTCCCCATAAAACCACATAACAAGATACAATCTC
TCACAATGCCCGAAATTATCGACGACAAATCCCAACACTGCATCCCCTTC
CTCCTCGACCGACTCCAAGCCCACCAAGCCCGCCATCCCACCAACACCCC
GCCTTTCTTCCTCGGTCTAAATGGCGTTCAAGGTGCCGGTAAAACAGTTT
TGGTCTCAACCCTCCAATCCACCCTCCGCTCTCCACCCTACTCCCTAAAC
GTGGTAACCCTCTCTCTCGACGACCTGTACCTCACGCACGCGCAACAAGA
ACACCTCGCCGCCTCGCACCCCTCGAACCTGCTCCTCCAGCACCGCGGAC
AACCCGGCACCCATGACCTGACACTAGCGAAGGAAGTGTTCTCGGCGTTA
CGCGCGGGCCAGCGCACCGCTATCCCGGCGTACGACAAGTCGGCGTTTTC
AGGACAGGGCGATCGCGTGCCTGCGTCTCAGTGGGAGGTGGTGAATAAGG
AGGGTGAGGAGAAGGTGAAGGTGGTGATTTTCGAGGGGTGGTGTGTTGGG
TTTCGTGCGTGGGATGAGGAGGTGCTTAGGGGGAAGTGGGAGGATGCGGT
TAGGTTGAGAGAAGCTGCTACTGCTGGTCAGGGTGAGTATAAGGGAAGAT
TGGGGTATGTAGGGCTTGAGGATGTGAGGACGGTTAATGAGGCGTTGAGG
GGGTATGATGTGATTACTGATCAGTTGGATGCGCTGATCCATATTGATGC
GCAAGACCTTCACTTCGTCTACGATTGGCGACAGGAGCAAGAGAGGACCC
TTCGCGCTGCCAAGGGGACTGGCATGACGGAGGAACAGGTCACTAAGTTT
GTTGATGGCTATTATCCGTCTTATGAACTCTTCACTGAGACTCTCCGGGA
GGGTACGTTCAAGCCTGTCCCTCATGCTACTACGGCATCTGCTCCGCCAA
CAGGCTGGGAAGGAAGACAGCTTCGGTTGGTTGTGGACAAGAATAGGAGA
GTGCAGGAGATTATCAACATTTAAATGCCGGCCAATCCTTCAGGCAATAC
ATTTGTCCTCCGCAGATTCTCCCGCTCGGATCACCTCCGAAGCTTAGTCT
TTATTAGCAGTATATATCATTGTAGCCAACGACAACAGGATATATTACTT
ACACATAGACCAAATCTATCACACTTCCCCATAAAACCACATAACAAGAT
ACAATCTCTCACAATGCCCGAAATTATCGACGACAAATCCCAACACTGCA
TCCCCTTCCTCCTCGACCGACTCCAAGCCCACCAAGCCCGCCATCCCACC
AACACCCCGCCTTTCTTCCTCGGTCTAAATGGCGTTCAAGGTGCCGGTAA
AACAGTTTTGGTCTCAACCCTCCAATCCACCCTCCGCTCTCCACCCTACT
CCCTAAACGTGGTAACCCTCTCTCTCGACGACCTGTACCTCACGCACGCG
CAACAAGAACACCTCGCCGCCTCGCACCCCTCGAACCTGCTCCTCCAGCA
CCGCGGACAACCCGGCACCCATGACCTGACACTAGCGAAGGAAGTGTTCT
CGGCGTTACGCGCGGGCCAGCGCACCGCTATCCCGGCGTACGACAAGTCG
GCGTTTTCAGGACAGGGCGATCGCGTGCCTGCGTCTCAGTGGGAGGTGGT
GAATAAGGAGGGTGAGGAGAAGGTGAAGGTGGTGATTTTCGAGGGGTGGT
GTGTTGGGTTTCGTGCGTGGGATGAGGAGGTGCTTAGGGGGAAGTGGGAG
GATGCGGTTAGGTTGAGAGAAGCTGCTACTGCTGGTCAGGGTGAGTATAA
GGGAAGATTGGGGTATGTAGGGCTTGAGGATGTGAGGACGGTTAATGAGG
CGTTGAGGGGGTATGATGTGATTACTGATCAGTTGGATGCGCTGATCCAT
ATTGATGCGCAAGACCTTCACTTCGTCTACGATTGGCGACAGGAGCAAGA
GAGGACCCTTCGCGCTGCCAAGGGGACTGGCATGACGGAGGAACAGGTCA
CTAAGTTTGTTGATGGCTATTATCCGTCTTATGAACTCTTCACTGAGACT
CTCCGGGAGGGTACGTTCAAGCCTGTCCCTCATGCTACTACGGCATCTGC
TCCGCCAACAGGCTGGGAAGGAAGACAGCTTCGGTTGGTTGTGGACAAGA
ATAGGAGAGTGCAGGAGATTATCAACATTTAAATGCCGGCCAATCCTTCA
GGCAATACATTTGTCCTCCGCAGATTCTCCCGCTCGGATCACCTCCGAAG
CTTAGTCTTTATTAGCAGTATATATCATTGTAGCCAACGACAACAGGATA
TATTACTTACACATAGACCAAATCTATCACACTTCCCCATAAAACCACAT
AACAAGATACAATCTCTCACAATGCCCGAAATTATCGACGACAAATCCCA
ACACTGCATCCCCTTCCTCCTCGACCGACTCCAAGCCCACCAAGCCCGCC
ATCCCACCAACACCCCGCCTTTCTTCCTCGGTCTAAATGGCGTTCAAGGT
GCCGGTAAAACAGTTTTGGTCTCAACCCTCCAATCCACCCTCCGCTCTCC
ACCCTACTCCCTAAACGTGGTAACCCTCTCTCTCGACGACCTGTACCTCA
CGCACGCGCAACAAGAACACCTCGCCGCCTCGCACCCCTCGAACCTGCTC
CTCCAGCACCGCGGACAACCCGGCACCCATGACCTGACACTAGCGAAGGA
AGTGTTCTCGGCGTTACGCGCGGGCCAGCGCACCGCTATCCCGGCGTACG
ACAAGTCGGCGTTTTCAGGACAGGGCGATCGCGTGCCTGCGTCTCAGTGG
GAGGTGGTGAATAAGGAGGGTGAGGAGAAGGTGAAGGTGGTGATTTTCGA
GGGGTGGTGTGTTGGGTTTCGTGCGTGGGATGAGGAGGTGCTTAGGGGGA
AGTGGGAGGATGCGGTTAGGTTGAGAGAAGCTGCTACTGCTGGTCAGGGT
GAGTATAAGGGAAGATTGGGGTATGTAGGGCTTGAGGATGTGAGGACGGT
TAATGAGGCGTTGAGGGGGTATGATGTGATTACTGATCAGTTGGATGCGC
TGATCCATATTGATGCGCAAGACCTTCACTTCGTCTACGATTGGCGACAG
GAGCAAGAGAGGACCCTTCGCGCTGCCAAGGGGACTGGCATGACGGAGGA
ACAGGTCACTAAGTTTGTTGATGGCTATTATCCGTCTTATGAACTCTTCA
CTGAGACTCTCCGGGAGGGTACGTTCAAGCCTGTCCCTCATGCTACTACG
GCATCTGCTCCGCCAACAGGCTGGGAAGGAAGACAGCTTCGGTTGGTTGT
GGACAAGAATAGGAGAGTGCAGGAGATTATCAACATTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000860-T1.utr3p1 | KJC3_000860-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2149185..2151250 + |
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