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KJC3_000862-T1, KJC3_000862-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000862-T1
Unique NameKJC3_000862-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2153893..2155124+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000862-T1 ID=KJC3_000862-T1|Name=KJC3_000862-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1232bp|location=Sequence derived from alignment at ch1:2153893..2155124+ (Aspergillus niger KJC3)
ACCCCACGCGCTCCGATAATCGAACCCTCTGCCAGAGCAGACAGCTGATC
GCCATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCAC
TCAAGCCAGCCAGTCATTTGCAAATCATGGCGCCAATCTACGCTCCTCGC
ATCTCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCAC
ACCTTCGCGCTGGAACACAGCTCCACGATCAAATCGAACCCGACATTTCG
AGCAGAGTTCGCTCGTATGTGTAATGCTATCGGAGTCGATCCCCTCGCAG
CCAGCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGG
AGTTTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGA
AGTAGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACG
GCGGGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGAAAG
GCTATTGGTAGTGGACTGGAGGTTACAGAGTACGTACTCACCCTTTGCTC
CACCTTGTGATTAGTGATACAGTGTACTAATCTAAGTTACCTTCTGCGAC
ATGCAGTGACGACGTTCTCCGAGCTGTCAAGAGTCTGGAACCGCTTGGCT
CTGGGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATTCGATCAATT
CCCAAAGAGCTAAACACAGATCAGGCTACTGTGCTCGAGGCTATTCAGGT
TCTTGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGAATTGGGAGA
AGGCTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGATGGCCTTGTC
TGGCTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACCTCAAAACCT
GCTAGATGACAGTGGGTGAGTATATTTTGTCGAAGGCTACTACTGTCTGA
TATAATGATATATCCAATGACACCTGGGGTGTTGGGACTGGCGCAAGTGT
CCAGCGGGTACTGGATGCATGGAGATATAATAGTCATTGCTCTTGTCCGG
GAACTTCTCGAGACTGGACAGGGCATGCAGGAGTCCAAGATGCAGTGACT
TAGTTTATCCCGAGGCTGCTATAGAATCCTCCCGGTCATGTCATATATAT
CTTTCTCAAGTCTGTTGAGAATCGTGATTGATGGTCCAGTATCAGGGTCC
TGGAACGACCTTCCTAGCTTATGGTTGAACTA
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Coding sequence (CDS) from alignment at ch1:2153893..2155124+

>KJC3_000862-T1 ID=KJC3_000862-T1|Name=KJC3_000862-T1|organism=Aspergillus niger KJC3|type=CDS|length=1578bp|location=Sequence derived from alignment at ch1:2153893..2155124+ (Aspergillus niger KJC3)
ATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCA
AGCCAGCCAGTCATTTGCAAATCATGGCGCCAATCTACGCTCCTCGCATC
TCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACC
TTCGCGCTGGAACACAGCTCCACGATCAAATCGAACCCGACATTTCGAGC
AGAGTTCGCTCGTATGTGTAATGCTATCGGAGTCGATCCCCTCGCAGCCA
GCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGT
TTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGT
AGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCG
GGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGAAAGGCT
ATTGGTAGTGGACTGGAGGTTACAGATGACGACGTTCTCCGAGCTGTCAA
GAGTCTGGAACCGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCA
AGCAATATATTCGATCAATTCCCAAAGAGCTAAACACAGATCAGGCTACT
GTGCTCGAGGCTATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCA
AGCGAATTTGAATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATC
TGCTGGCGGATGGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAG
TATTGGTCACCTCAAAACCTGCTAGATGACAGTGGGTGAATGGCTACTCG
TCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCAAGCCAGCCAGT
CATTTGCAAATCATGGCGCCAATCTACGCTCCTCGCATCTCTCCTCTTTA
CAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACCTTCGCGCTGGA
ACACAGCTCCACGATCAAATCGAACCCGACATTTCGAGCAGAGTTCGCTC
GTATGTGTAATGCTATCGGAGTCGATCCCCTCGCAGCCAGCAATGTCAAA
GGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGTTTCTGGACGCA
GATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGTAGCTGTTAGAG
TGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCGGGTTAATCGGT
GTTGAGGAATGTCGGAAACGAGTAGGCAAGGGAAAGGCTATTGGTAGTGG
ACTGGAGGTTACAGATGACGACGTTCTCCGAGCTGTCAAGAGTCTGGAAC
CGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATT
CGATCAATTCCCAAAGAGCTAAACACAGATCAGGCTACTGTGCTCGAGGC
TATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGA
ATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGAT
GGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACC
TCAAAACCTGCTAGATGACAGTGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000862KJC3_000862Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000862-T1.utr5p1KJC3_000862-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000862-T1.exon1KJC3_000862-T1.exon1Aspergillus niger KJC3exon
KJC3_000862-T1.exon2KJC3_000862-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000862-T1.cdsKJC3_000862-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000862-T1.utr3p1KJC3_000862-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000862-T1KJC3_000862-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926477X
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016689
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR040608
DBxrefPFAM:PF04157
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2153893..2155124 +
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